RNA–Protein interactions for RNA: ENST00000466416.1

ABCF3-205, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 4

Gene ABCF3, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-205ENST00000466416 SEMA6BQ9H3T3 888 aa11.67□□□□□ -0.54
ABCF3-205ENST00000466416 GJD2Q9UKL4 321 aa11.67□□□□□ -0.54
ABCF3-205ENST00000466416 PNMA3Q9UL41 463 aa11.67□□□□□ -0.54
ABCF3-205ENST00000466416 IQSEC3Q9UPP2 1182 aaPredicted RBP11.67□□□□□ -0.54
ABCF3-205ENST00000466416 SPTBN5Q9NRC6 3674 aaKnown RBP11.66□□□□□ -0.54
ABCF3-205ENST00000466416 COL2A1P02458 1487 aaPredicted RBP11.66□□□□□ -0.54
ABCF3-205ENST00000466416 DOCK3Q8IZD9 2030 aa11.66□□□□□ -0.54
ABCF3-205ENST00000466416 GCLCP48506 637 aaPredicted RBP11.66□□□□□ -0.54
ABCF3-205ENST00000466416 TCP10Q12799 353 aa11.66□□□□□ -0.54
ABCF3-205ENST00000466416 FKBP5Q13451 457 aaPredicted RBP11.66□□□□□ -0.54
ABCF3-205ENST00000466416 AGTPBP1Q9UPW5 1226 aa11.66□□□□□ -0.54
ABCF3-205ENST00000466416 MROH5Q6ZUA9 1318 aa11.65□□□□□ -0.54
ABCF3-205ENST00000466416 PHF20L1A8MW92 1017 aa11.65□□□□□ -0.54
ABCF3-205ENST00000466416 TNFRSF10AO00220 468 aa11.65□□□□□ -0.54
ABCF3-205ENST00000466416 APAF1O14727 1248 aa11.65□□□□□ -0.54
ABCF3-205ENST00000466416 TRIM32Q13049 653 aa11.65□□□□□ -0.54
ABCF3-205ENST00000466416 EPHA10Q5JZY3 1008 aa11.65□□□□□ -0.54
ABCF3-205ENST00000466416 MAP3K21Q5TCX8 1036 aa11.65□□□□□ -0.54
ABCF3-205ENST00000466416 CDC42EP5Q6NZY7 148 aa11.65□□□□□ -0.54
ABCF3-205ENST00000466416 MYBBP1AQ9BQG0 1328 aaKnown RBP11.64□□□□□ -0.55
ABCF3-205ENST00000466416 CTNND1O60716 968 aaKnown RBP11.64□□□□□ -0.55
ABCF3-205ENST00000466416 PLA2G5P39877 138 aa11.64□□□□□ -0.55
ABCF3-205ENST00000466416 MAP3K10Q02779 954 aa11.64□□□□□ -0.55
ABCF3-205ENST00000466416 LRRC26Q2I0M4 334 aa11.64□□□□□ -0.55
ABCF3-205ENST00000466416 TWISTNBQ3B726 338 aaPredicted RBP11.64□□□□□ -0.55
ABCF3-205ENST00000466416 TRMT44Q8IYL2 757 aaKnown RBP11.64□□□□□ -0.55
ABCF3-205ENST00000466416 PUS3Q9BZE2 481 aaKnown RBP11.64□□□□□ -0.55
ABCF3-205ENST00000466416 FAM198AQ9UFP1 575 aa11.64□□□□□ -0.55
ABCF3-205ENST00000466416 LRRFIP2Q9Y608 721 aaKnown RBP11.64□□□□□ -0.55
ABCF3-205ENST00000466416 A0A1B0GUL6 1792 aa11.64□□□□□ -0.55
ABCF3-205ENST00000466416 XRCC5P13010 732 aaKnown RBP11.63□□□□□ -0.55
ABCF3-205ENST00000466416 NFIAQ12857 509 aa11.63□□□□□ -0.55
ABCF3-205ENST00000466416 PABPC4Q13310 644 aaKnown RBP eCLIP11.63□□□□□ -0.55
ABCF3-205ENST00000466416 TJAP1Q5JTD0 557 aa11.63□□□□□ -0.55
ABCF3-205ENST00000466416 BEND3Q5T5X7 828 aa11.63□□□□□ -0.55
ABCF3-205ENST00000466416 PROCA1Q8NCQ7 364 aaPredicted RBP11.63□□□□□ -0.55
ABCF3-205ENST00000466416 WDR66Q8TBY9 1149 aa11.63□□□□□ -0.55
ABCF3-205ENST00000466416 TRIB2Q92519 343 aa11.63□□□□□ -0.55
ABCF3-205ENST00000466416 SPINK5Q9NQ38 1064 aaPredicted RBP11.63□□□□□ -0.55
ABCF3-205ENST00000466416 DAGLAQ9Y4D2 1042 aa11.63□□□□□ -0.55
ABCF3-205ENST00000466416 DDX60LQ5H9U9 1706 aaKnown RBP11.63□□□□□ -0.55
ABCF3-205ENST00000466416 TRIM75PA6NK02 468 aa11.62□□□□□ -0.55
ABCF3-205ENST00000466416 GRM8O00222 908 aa11.62□□□□□ -0.55
ABCF3-205ENST00000466416 PRKAR2AP13861 404 aaKnown RBP11.62□□□□□ -0.55
ABCF3-205ENST00000466416 SMAD3P84022 425 aaKnown RBP11.62□□□□□ -0.55
ABCF3-205ENST00000466416 MYLIPQ8WY64 445 aa11.62□□□□□ -0.55
ABCF3-205ENST00000466416 FAM122AQ96E09 287 aa11.62□□□□□ -0.55
ABCF3-205ENST00000466416 USP40Q9NVE5 1235 aa11.62□□□□□ -0.55
ABCF3-205ENST00000466416 PRKAG2Q9UGJ0 569 aa11.62□□□□□ -0.55
ABCF3-205ENST00000466416 AK9Q5TCS8 1911 aa11.61□□□□□ -0.55
ABCF3-205ENST00000466416 ENTPD3O75355 529 aa11.61□□□□□ -0.55
ABCF3-205ENST00000466416 PDE8BO95263 885 aa11.61□□□□□ -0.55
ABCF3-205ENST00000466416 FOSL2P15408 326 aa11.61□□□□□ -0.55
ABCF3-205ENST00000466416 CYP2B6P20813 491 aa11.61□□□□□ -0.55
ABCF3-205ENST00000466416 METTL24Q5JXM2 366 aa11.61□□□□□ -0.55
ABCF3-205ENST00000466416 TREML2Q5T2D2 321 aa11.61□□□□□ -0.55
ABCF3-205ENST00000466416 LHX8Q68G74 356 aa11.61□□□□□ -0.55
ABCF3-205ENST00000466416 ZFPM1Q8IX07 1006 aa11.61□□□□□ -0.55
ABCF3-205ENST00000466416 TSR2Q969E8 191 aaKnown RBP11.61□□□□□ -0.55
ABCF3-205ENST00000466416 NUDT12Q9BQG2 462 aa11.61□□□□□ -0.55
ABCF3-205ENST00000466416 C9orf78Q9NZ63 289 aaPredicted RBP11.61□□□□□ -0.55
ABCF3-205ENST00000466416 ATRNL1Q5VV63 1379 aa11.61□□□□□ -0.55
ABCF3-205ENST00000466416 KIF16BQ96L93 1317 aa11.6□□□□□ -0.55
ABCF3-205ENST00000466416 IFIT1P09914 478 aaKnown RBP11.6□□□□□ -0.55
ABCF3-205ENST00000466416 CACNB2Q08289 660 aaPredicted RBP11.6□□□□□ -0.55
ABCF3-205ENST00000466416 SOCS4Q8WXH5 440 aa11.6□□□□□ -0.55
ABCF3-205ENST00000466416 IDI2Q9BXS1 227 aa11.6□□□□□ -0.55
ABCF3-205ENST00000466416 TBC1D2Q9BYX2 928 aa11.6□□□□□ -0.55
ABCF3-205ENST00000466416 MORF4L1Q9UBU8 362 aa11.6□□□□□ -0.55
ABCF3-205ENST00000466416 TMEM265A0A087WTH1 108 aa11.59□□□□□ -0.55
ABCF3-205ENST00000466416 SHHQ15465 462 aa11.59□□□□□ -0.55
ABCF3-205ENST00000466416 DIXDC1Q155Q3 683 aa11.59□□□□□ -0.55
ABCF3-205ENST00000466416 ZSCAN29Q8IWY8 852 aaPredicted RBP11.59□□□□□ -0.55
ABCF3-205ENST00000466416 VGLL2Q8N8G2 317 aa11.59□□□□□ -0.55
ABCF3-205ENST00000466416 SENP6Q9GZR1 1112 aaPredicted RBP11.59□□□□□ -0.55
ABCF3-205ENST00000466416 ASCC2Q9H1I8 757 aaPredicted RBP11.59□□□□□ -0.55
ABCF3-205ENST00000466416 TTYH1Q9H313 450 aaPredicted RBP11.59□□□□□ -0.55
ABCF3-205ENST00000466416 RAPGEFL1Q9UHV5 662 aa11.59□□□□□ -0.55
ABCF3-205ENST00000466416 F6X3S4 739 aa11.58□□□□□ -0.56
ABCF3-205ENST00000466416 ALDH1L1O75891 902 aa11.58□□□□□ -0.56
ABCF3-205ENST00000466416 ZKSCAN1P17029 563 aaPredicted RBP11.58□□□□□ -0.56
ABCF3-205ENST00000466416 RGS3P49796 1198 aa11.58□□□□□ -0.56
ABCF3-205ENST00000466416 SPP2Q13103 211 aa11.58□□□□□ -0.56
ABCF3-205ENST00000466416 PDE3AQ14432 1141 aa11.58□□□□□ -0.56
ABCF3-205ENST00000466416 LRRC24Q50LG9 513 aa11.58□□□□□ -0.56
ABCF3-205ENST00000466416 ZNF280CQ8ND82 737 aa11.58□□□□□ -0.56
ABCF3-205ENST00000466416 PRUNE2Q8WUY3 3088 aa11.58□□□□□ -0.56
ABCF3-205ENST00000466416 TBC1D12O60347 775 aa11.57□□□□□ -0.56
ABCF3-205ENST00000466416 LDHBP07195 334 aaKnown RBP11.57□□□□□ -0.56
ABCF3-205ENST00000466416 CCND3P30281 292 aaPredicted RBP11.57□□□□□ -0.56
ABCF3-205ENST00000466416 HOXD11P31277 338 aaPredicted RBP11.57□□□□□ -0.56
ABCF3-205ENST00000466416 PUM3Q15397 648 aaKnown RBP11.57□□□□□ -0.56
ABCF3-205ENST00000466416 SH3BP5LQ7L8J4 393 aa11.57□□□□□ -0.56
ABCF3-205ENST00000466416 USP6NLQ92738 828 aa11.57□□□□□ -0.56
ABCF3-205ENST00000466416 LAMA2P24043 3122 aaKnown RBP11.57□□□□□ -0.56
ABCF3-205ENST00000466416 FGFR2P21802 821 aa11.56□□□□□ -0.56
ABCF3-205ENST00000466416 PRDX5P30044 214 aa11.56□□□□□ -0.56
ABCF3-205ENST00000466416 MAPK4P31152 587 aa11.56□□□□□ -0.56
ABCF3-205ENST00000466416 RGS2P41220 211 aa11.56□□□□□ -0.56
ABCF3-205ENST00000466416 SH3D19Q5HYK7 790 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms