RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 FLT1P17948 1338 aa17.12■□□□□ 0.33
COL6A1-202ENST00000463060 DDX60LQ5H9U9 1706 aaKnown RBP17.11■□□□□ 0.33
COL6A1-202ENST00000463060 USP5P45974 858 aa17.11■□□□□ 0.33
COL6A1-202ENST00000463060 ANAPC15P60006 121 aa17.11■□□□□ 0.33
COL6A1-202ENST00000463060 KIF4BQ2VIQ3 1234 aa17.11■□□□□ 0.33
COL6A1-202ENST00000463060 TBC1D10BQ4KMP7 808 aaPredicted RBP17.11■□□□□ 0.33
COL6A1-202ENST00000463060 MAPKAPK5Q8IW41 473 aa17.11■□□□□ 0.33
COL6A1-202ENST00000463060 NAPBQ9H115 298 aa17.11■□□□□ 0.33
COL6A1-202ENST00000463060 SNX14Q9Y5W7 946 aa17.11■□□□□ 0.33
COL6A1-202ENST00000463060 BAZ2AQ9UIF9 1905 aaKnown RBP17.11■□□□□ 0.33
COL6A1-202ENST00000463060 WDR90Q96KV7 1748 aa17.1■□□□□ 0.33
COL6A1-202ENST00000463060 USP17L12C9JPN9 530 aa17.1■□□□□ 0.33
COL6A1-202ENST00000463060 USP17L21D6R901 530 aa17.1■□□□□ 0.33
COL6A1-202ENST00000463060 SMIM22K7EJ46 135 aa17.1■□□□□ 0.33
COL6A1-202ENST00000463060 ENTPD3O75355 529 aa17.1■□□□□ 0.33
COL6A1-202ENST00000463060 CACNB3P54284 484 aa17.1■□□□□ 0.33
COL6A1-202ENST00000463060 RBM26Q5T8P6 1007 aaKnown RBP17.1■□□□□ 0.33
COL6A1-202ENST00000463060 C12orf60Q5U649 245 aa17.1■□□□□ 0.33
COL6A1-202ENST00000463060 ZFPM1Q8IX07 1006 aa17.1■□□□□ 0.33
COL6A1-202ENST00000463060 ZNF784Q8NCA9 323 aaPredicted RBP17.1■□□□□ 0.33
COL6A1-202ENST00000463060 TSHZ2Q9NRE2 1034 aa17.1■□□□□ 0.33
COL6A1-202ENST00000463060 ADARB2Q9NS39 739 aaKnown RBP17.1■□□□□ 0.33
COL6A1-202ENST00000463060 PGAP2Q9UHJ9 254 aa17.1■□□□□ 0.33
COL6A1-202ENST00000463060 TACC3Q9Y6A5 838 aa17.1■□□□□ 0.33
COL6A1-202ENST00000463060 ZNF213O14771 459 aa17.09■□□□□ 0.33
COL6A1-202ENST00000463060 TDO2P48775 406 aa17.09■□□□□ 0.33
COL6A1-202ENST00000463060 EVX2Q03828 476 aa17.09■□□□□ 0.33
COL6A1-202ENST00000463060 OSBPL5Q9H0X9 879 aaPredicted RBP17.09■□□□□ 0.33
COL6A1-202ENST00000463060 MCM9Q9NXL9 1143 aa17.09■□□□□ 0.33
COL6A1-202ENST00000463060 ASTN2O75129 1339 aaPredicted RBP17.09■□□□□ 0.33
COL6A1-202ENST00000463060 CNTNAP1P78357 1384 aa17.09■□□□□ 0.33
COL6A1-202ENST00000463060 SCN4AP35499 1836 aa17.08■□□□□ 0.33
COL6A1-202ENST00000463060 LAMA4Q16363 1823 aa17.08■□□□□ 0.33
COL6A1-202ENST00000463060 COL2A1P02458 1487 aaPredicted RBP17.08■□□□□ 0.32
COL6A1-202ENST00000463060 CYP2D7A0A087X1C5 515 aa17.08■□□□□ 0.32
COL6A1-202ENST00000463060 CLRN2A0PK11 232 aa17.08■□□□□ 0.32
COL6A1-202ENST00000463060 FGRP09769 529 aa17.08■□□□□ 0.32
COL6A1-202ENST00000463060 CYP2D6P10635 497 aa17.08■□□□□ 0.32
COL6A1-202ENST00000463060 MCCP23508 829 aa17.08■□□□□ 0.32
COL6A1-202ENST00000463060 LMOD1P29536 600 aaPredicted RBP17.08■□□□□ 0.32
COL6A1-202ENST00000463060 IMMTQ16891 758 aaKnown RBP17.08■□□□□ 0.32
COL6A1-202ENST00000463060 RNF20Q5VTR2 975 aa17.08■□□□□ 0.32
COL6A1-202ENST00000463060 SH3BP5LQ7L8J4 393 aa17.08■□□□□ 0.32
COL6A1-202ENST00000463060 FAM83AQ86UY5 434 aa17.08■□□□□ 0.32
COL6A1-202ENST00000463060 ARPP21Q9UBL0 812 aaPredicted RBP17.08■□□□□ 0.32
COL6A1-202ENST00000463060 HACL1Q9UJ83 578 aa17.08■□□□□ 0.32
COL6A1-202ENST00000463060 MYH1P12882 1939 aa17.08■□□□□ 0.32
COL6A1-202ENST00000463060 ATRNL1Q5VV63 1379 aa17.07■□□□□ 0.32
COL6A1-202ENST00000463060 MYO1BO43795 1136 aa17.07■□□□□ 0.32
COL6A1-202ENST00000463060 PLCD1P51178 756 aa17.07■□□□□ 0.32
COL6A1-202ENST00000463060 HAND2P61296 217 aa17.07■□□□□ 0.32
COL6A1-202ENST00000463060 PPARAQ07869 468 aa17.07■□□□□ 0.32
COL6A1-202ENST00000463060 PICALMQ13492 652 aa17.07■□□□□ 0.32
COL6A1-202ENST00000463060 ADCK5Q3MIX3 580 aa17.07■□□□□ 0.32
COL6A1-202ENST00000463060 STOX1Q6ZVD7 989 aa17.07■□□□□ 0.32
COL6A1-202ENST00000463060 USP50Q70EL3 339 aaPredicted RBP17.07■□□□□ 0.32
COL6A1-202ENST00000463060 FAM151AQ8WW52 585 aa17.07■□□□□ 0.32
COL6A1-202ENST00000463060 DDRGK1Q96HY6 314 aa17.07■□□□□ 0.32
COL6A1-202ENST00000463060 TAF1DQ9H5J8 278 aaPredicted RBP17.07■□□□□ 0.32
COL6A1-202ENST00000463060 NAV1Q8NEY1 1877 aa17.07■□□□□ 0.32
COL6A1-202ENST00000463060 ROBO3Q96MS0 1386 aa17.06■□□□□ 0.32
COL6A1-202ENST00000463060 DDTLA6NHG4 134 aaPredicted RBP17.06■□□□□ 0.32
COL6A1-202ENST00000463060 TCP10L2B9ZVM9 353 aa17.06■□□□□ 0.32
COL6A1-202ENST00000463060 E7EWF7 191 aa17.06■□□□□ 0.32
COL6A1-202ENST00000463060 ZKSCAN1P17029 563 aaPredicted RBP17.06■□□□□ 0.32
COL6A1-202ENST00000463060 EPHX2P34913 555 aa17.06■□□□□ 0.32
COL6A1-202ENST00000463060 CTDSPL2Q05D32 466 aa17.06■□□□□ 0.32
COL6A1-202ENST00000463060 COL9A3Q14050 684 aaPredicted RBP17.06■□□□□ 0.32
COL6A1-202ENST00000463060 METTL16Q86W50 562 aaKnown RBP17.06■□□□□ 0.32
COL6A1-202ENST00000463060 TBC1D10CQ8IV04 446 aa17.06■□□□□ 0.32
COL6A1-202ENST00000463060 TM6SF1Q9BZW5 370 aa17.06■□□□□ 0.32
COL6A1-202ENST00000463060 TMOD2Q9NZR1 351 aa17.06■□□□□ 0.32
COL6A1-202ENST00000463060 SAP30BPQ9UHR5 308 aaKnown RBP17.06■□□□□ 0.32
COL6A1-202ENST00000463060 IQCA1LA6NCM1 817 aa17.05■□□□□ 0.32
COL6A1-202ENST00000463060 MINDY4BA8MYZ0 360 aa17.05■□□□□ 0.32
COL6A1-202ENST00000463060 GABPAQ06546 454 aa17.05■□□□□ 0.32
COL6A1-202ENST00000463060 TCP10Q12799 353 aa17.05■□□□□ 0.32
COL6A1-202ENST00000463060 STAG1Q8WVM7 1258 aa17.05■□□□□ 0.32
COL6A1-202ENST00000463060 DHX36Q9H2U1 1008 aaKnown RBP17.05■□□□□ 0.32
COL6A1-202ENST00000463060 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.05■□□□□ 0.32
COL6A1-202ENST00000463060 PITPNM2Q9BZ72 1349 aa17.04■□□□□ 0.32
COL6A1-202ENST00000463060 POLR3DP05423 398 aaPredicted RBP17.04■□□□□ 0.32
COL6A1-202ENST00000463060 KRT32Q14532 448 aa17.04■□□□□ 0.32
COL6A1-202ENST00000463060 AKNAD1Q5T1N1 836 aa17.04■□□□□ 0.32
COL6A1-202ENST00000463060 ANGEL2Q5VTE6 544 aaKnown RBP17.04■□□□□ 0.32
COL6A1-202ENST00000463060 TTC6Q86TZ1 520 aa17.04■□□□□ 0.32
COL6A1-202ENST00000463060 NKX2-3Q8TAU0 364 aa17.04■□□□□ 0.32
COL6A1-202ENST00000463060 ZC3H15Q8WU90 426 aaKnown RBP17.04■□□□□ 0.32
COL6A1-202ENST00000463060 TEPSINQ96N21 525 aa17.04■□□□□ 0.32
COL6A1-202ENST00000463060 EHD4Q9H223 541 aa17.04■□□□□ 0.32
COL6A1-202ENST00000463060 ZSWIM6Q9HCJ5 1215 aa17.04■□□□□ 0.32
COL6A1-202ENST00000463060 INCENPQ9NQS7 918 aa17.04■□□□□ 0.32
COL6A1-202ENST00000463060 TAOK2Q9UL54 1235 aa17.04■□□□□ 0.32
COL6A1-202ENST00000463060 LAMB1P07942 1786 aa17.04■□□□□ 0.32
COL6A1-202ENST00000463060 SIPA1L1O43166 1804 aa17.03■□□□□ 0.32
COL6A1-202ENST00000463060 PCP11498 1178 aaKnown RBP17.03■□□□□ 0.32
COL6A1-202ENST00000463060 MAP3K10Q02779 954 aa17.03■□□□□ 0.32
COL6A1-202ENST00000463060 RASA3Q14644 834 aa17.03■□□□□ 0.32
COL6A1-202ENST00000463060 VEZTQ9HBM0 779 aa17.03■□□□□ 0.32
COL6A1-202ENST00000463060 ORC4O43929 436 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 822.5 ms