RNA–Protein interactions for RNA: ENST00000461539.5

C9orf78-203, Transcript of chromosome 9 open reading frame 78, humanhuman

TSL 5

Gene C9orf78, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-203ENST00000461539 PNMA8AQ86V59 439 aaPredicted RBP11.64□□□□□ -0.55
C9orf78-203ENST00000461539 APOBEC3FQ8IUX4 373 aaKnown RBP11.64□□□□□ -0.55
C9orf78-203ENST00000461539 ZSCAN29Q8IWY8 852 aaPredicted RBP11.64□□□□□ -0.55
C9orf78-203ENST00000461539 ZFPM1Q8IX07 1006 aa11.64□□□□□ -0.55
C9orf78-203ENST00000461539 OSBPL5Q9H0X9 879 aaPredicted RBP11.64□□□□□ -0.55
C9orf78-203ENST00000461539 NMRK2Q9NPI5 230 aa11.64□□□□□ -0.55
C9orf78-203ENST00000461539 ARPP21Q9UBL0 812 aaPredicted RBP11.64□□□□□ -0.55
C9orf78-203ENST00000461539 SCAF8Q9UPN6 1271 aaKnown RBP11.64□□□□□ -0.55
C9orf78-203ENST00000461539 CLEC11AQ9Y240 323 aa11.64□□□□□ -0.55
C9orf78-203ENST00000461539 SCN9AQ15858 1988 aa11.64□□□□□ -0.55
C9orf78-203ENST00000461539 AKAP11Q9UKA4 1901 aa11.64□□□□□ -0.55
C9orf78-203ENST00000461539 CYP2D7A0A087X1C5 515 aa11.63□□□□□ -0.55
C9orf78-203ENST00000461539 ZNF213O14771 459 aa11.63□□□□□ -0.55
C9orf78-203ENST00000461539 NPM3O75607 178 aaKnown RBP11.63□□□□□ -0.55
C9orf78-203ENST00000461539 RASA3Q14644 834 aa11.63□□□□□ -0.55
C9orf78-203ENST00000461539 RNF20Q5VTR2 975 aa11.63□□□□□ -0.55
C9orf78-203ENST00000461539 FKBP1CQ5VVH2 108 aa11.63□□□□□ -0.55
C9orf78-203ENST00000461539 CREB3L3Q68CJ9 461 aa11.63□□□□□ -0.55
C9orf78-203ENST00000461539 CTR9Q6PD62 1173 aa11.63□□□□□ -0.55
C9orf78-203ENST00000461539 FAM151AQ8WW52 585 aa11.63□□□□□ -0.55
C9orf78-203ENST00000461539 DCPSQ96C86 337 aaKnown RBP11.63□□□□□ -0.55
C9orf78-203ENST00000461539 C22orf23Q9BZE7 217 aa11.63□□□□□ -0.55
C9orf78-203ENST00000461539 MKRN1Q9UHC7 482 aaKnown RBP11.63□□□□□ -0.55
C9orf78-203ENST00000461539 PALD1Q9ULE6 856 aa11.63□□□□□ -0.55
C9orf78-203ENST00000461539 SLC27A2O14975 620 aa11.62□□□□□ -0.55
C9orf78-203ENST00000461539 HLA-DOAP06340 250 aa11.62□□□□□ -0.55
C9orf78-203ENST00000461539 ZKSCAN1P17029 563 aaPredicted RBP11.62□□□□□ -0.55
C9orf78-203ENST00000461539 HSPA4P34932 840 aa11.62□□□□□ -0.55
C9orf78-203ENST00000461539 PPARAQ07869 468 aa11.62□□□□□ -0.55
C9orf78-203ENST00000461539 NECTIN1Q15223 517 aa11.62□□□□□ -0.55
C9orf78-203ENST00000461539 SBK1Q52WX2 424 aa11.62□□□□□ -0.55
C9orf78-203ENST00000461539 TTC6Q86TZ1 520 aa11.62□□□□□ -0.55
C9orf78-203ENST00000461539 FAM83AQ86UY5 434 aa11.62□□□□□ -0.55
C9orf78-203ENST00000461539 SULF1Q8IWU6 871 aa11.62□□□□□ -0.55
C9orf78-203ENST00000461539 STK11IPQ8N1F8 1099 aa11.62□□□□□ -0.55
C9orf78-203ENST00000461539 ZC3H15Q8WU90 426 aaKnown RBP11.62□□□□□ -0.55
C9orf78-203ENST00000461539 TMEM39BQ9GZU3 492 aa11.62□□□□□ -0.55
C9orf78-203ENST00000461539 DEFB129Q9H1M3 183 aa11.62□□□□□ -0.55
C9orf78-203ENST00000461539 DHX36Q9H2U1 1008 aaKnown RBP11.62□□□□□ -0.55
C9orf78-203ENST00000461539 ZMYM6O95789 1325 aa11.61□□□□□ -0.55
C9orf78-203ENST00000461539 DDTLA6NHG4 134 aaPredicted RBP11.61□□□□□ -0.55
C9orf78-203ENST00000461539 SLC3A2P08195 630 aaKnown RBP11.61□□□□□ -0.55
C9orf78-203ENST00000461539 CYP21A2P08686 494 aa11.61□□□□□ -0.55
C9orf78-203ENST00000461539 PLCD1P51178 756 aa11.61□□□□□ -0.55
C9orf78-203ENST00000461539 CTDSPL2Q05D32 466 aa11.61□□□□□ -0.55
C9orf78-203ENST00000461539 C12orf60Q5U649 245 aa11.61□□□□□ -0.55
C9orf78-203ENST00000461539 SH3BP5LQ7L8J4 393 aa11.61□□□□□ -0.55
C9orf78-203ENST00000461539 KRT26Q7Z3Y9 468 aa11.61□□□□□ -0.55
C9orf78-203ENST00000461539 CSRNP1Q96S65 589 aa11.61□□□□□ -0.55
C9orf78-203ENST00000461539 GPBP1L1Q9HC44 474 aaPredicted RBP11.61□□□□□ -0.55
C9orf78-203ENST00000461539 GOLGB1Q14789 3259 aaKnown RBP11.61□□□□□ -0.55
C9orf78-203ENST00000461539 PITPNM2Q9BZ72 1349 aa11.6□□□□□ -0.55
C9orf78-203ENST00000461539 CHD4Q14839 1912 aa11.6□□□□□ -0.55
C9orf78-203ENST00000461539 CNTNAP1P78357 1384 aa11.6□□□□□ -0.55
C9orf78-203ENST00000461539 SMIM22K7EJ46 135 aa11.6□□□□□ -0.55
C9orf78-203ENST00000461539 POTEIP0CG38 1075 aa11.6□□□□□ -0.55
C9orf78-203ENST00000461539 POTEJP0CG39 1038 aa11.6□□□□□ -0.55
C9orf78-203ENST00000461539 EVX2Q03828 476 aa11.6□□□□□ -0.55
C9orf78-203ENST00000461539 PRAMEF18Q5VWM3 479 aa11.6□□□□□ -0.55
C9orf78-203ENST00000461539 USP48Q86UV5 1035 aa11.6□□□□□ -0.55
C9orf78-203ENST00000461539 TBC1D10CQ8IV04 446 aa11.6□□□□□ -0.55
C9orf78-203ENST00000461539 CDAN1Q8IWY9 1227 aa11.6□□□□□ -0.55
C9orf78-203ENST00000461539 RASEFQ8IZ41 740 aa11.6□□□□□ -0.55
C9orf78-203ENST00000461539 CRACR2BQ8N4Y2 399 aaPredicted RBP11.6□□□□□ -0.55
C9orf78-203ENST00000461539 DYNLL2Q96FJ2 89 aa11.6□□□□□ -0.55
C9orf78-203ENST00000461539 TRIM34Q9BYJ4 488 aa11.6□□□□□ -0.55
C9orf78-203ENST00000461539 RNF41Q9H4P4 317 aaPredicted RBP11.6□□□□□ -0.55
C9orf78-203ENST00000461539 TOMM22Q9NS69 142 aa11.6□□□□□ -0.55
C9orf78-203ENST00000461539 PI4KBQ9UBF8 816 aa11.6□□□□□ -0.55
C9orf78-203ENST00000461539 ADM5C9JUS6 153 aa11.59□□□□□ -0.55
C9orf78-203ENST00000461539 YY1P25490 414 aa11.59□□□□□ -0.55
C9orf78-203ENST00000461539 KRT32Q14532 448 aa11.59□□□□□ -0.55
C9orf78-203ENST00000461539 LDHDQ86WU2 507 aa11.59□□□□□ -0.55
C9orf78-203ENST00000461539 FOXP4Q8IVH2 680 aaPredicted RBP11.59□□□□□ -0.55
C9orf78-203ENST00000461539 TBC1D32Q96NH3 1257 aa11.59□□□□□ -0.55
C9orf78-203ENST00000461539 PGAP2Q9UHJ9 254 aa11.59□□□□□ -0.55
C9orf78-203ENST00000461539 SERPINB13Q9UIV8 391 aa11.59□□□□□ -0.55
C9orf78-203ENST00000461539 ANAPC4Q9UJX5 808 aa11.59□□□□□ -0.55
C9orf78-203ENST00000461539 PPP2R3BQ9Y5P8 575 aa11.59□□□□□ -0.55
C9orf78-203ENST00000461539 SNX14Q9Y5W7 946 aa11.59□□□□□ -0.55
C9orf78-203ENST00000461539 TAF6LQ9Y6J9 622 aa11.59□□□□□ -0.55
C9orf78-203ENST00000461539 E7EWF7 191 aa11.58□□□□□ -0.56
C9orf78-203ENST00000461539 PRDM1O75626 825 aa11.58□□□□□ -0.56
C9orf78-203ENST00000461539 RBM25P49756 843 aaKnown RBP11.58□□□□□ -0.56
C9orf78-203ENST00000461539 ANAPC15P60006 121 aa11.58□□□□□ -0.56
C9orf78-203ENST00000461539 PDE4BQ07343 736 aa11.58□□□□□ -0.56
C9orf78-203ENST00000461539 TRDNQ13061 729 aa11.58□□□□□ -0.56
C9orf78-203ENST00000461539 RRP12Q5JTH9 1297 aaKnown RBP11.58□□□□□ -0.56
C9orf78-203ENST00000461539 AKNAD1Q5T1N1 836 aa11.58□□□□□ -0.56
C9orf78-203ENST00000461539 MAP1SQ66K74 1059 aaPredicted RBP11.58□□□□□ -0.56
C9orf78-203ENST00000461539 MFSD6Q6ZSS7 791 aa11.58□□□□□ -0.56
C9orf78-203ENST00000461539 CDC37L1Q7L3B6 337 aa11.58□□□□□ -0.56
C9orf78-203ENST00000461539 SLC44A5Q8NCS7 719 aa11.58□□□□□ -0.56
C9orf78-203ENST00000461539 KCNB2Q92953 911 aa11.58□□□□□ -0.56
C9orf78-203ENST00000461539 TEPSINQ96N21 525 aa11.58□□□□□ -0.56
C9orf78-203ENST00000461539 GLIS2Q9BZE0 524 aaPredicted RBP11.58□□□□□ -0.56
C9orf78-203ENST00000461539 NBPF3Q9H094 633 aa11.58□□□□□ -0.56
C9orf78-203ENST00000461539 MKNK2Q9HBH9 465 aa11.58□□□□□ -0.56
C9orf78-203ENST00000461539 INCENPQ9NQS7 918 aa11.58□□□□□ -0.56
C9orf78-203ENST00000461539 TIAM2Q8IVF5 1701 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms