RNA–Protein interactions for RNA: ENST00000460616.5

SSR4-206, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 2,482 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-206ENST00000460616 PAPPAQ13219 1627 aa17.76■□□□□ 0.43
SSR4-206ENST00000460616 A0A1B0GUL7 405 aa17.76■□□□□ 0.43
SSR4-206ENST00000460616 SYKP43405 635 aa17.76■□□□□ 0.43
SSR4-206ENST00000460616 TNNI3KQ59H18 835 aa17.76■□□□□ 0.43
SSR4-206ENST00000460616 ANO1Q5XXA6 986 aa17.76■□□□□ 0.43
SSR4-206ENST00000460616 BRAPQ7Z569 592 aa17.76■□□□□ 0.43
SSR4-206ENST00000460616 YY1AP1Q9H869 796 aa17.76■□□□□ 0.43
SSR4-206ENST00000460616 FPGT-TNNI3KV9GXZ4 949 aa17.76■□□□□ 0.43
SSR4-206ENST00000460616 RFX7Q2KHR2 1363 aa17.76■□□□□ 0.43
SSR4-206ENST00000460616 CHMP4BP1P59074 171 aa17.75■□□□□ 0.43
SSR4-206ENST00000460616 AIMP1Q12904 312 aaKnown RBP17.75■□□□□ 0.43
SSR4-206ENST00000460616 TBX2Q13207 712 aaPredicted RBP17.75■□□□□ 0.43
SSR4-206ENST00000460616 BEND6Q5SZJ8 279 aaPredicted RBP17.75■□□□□ 0.43
SSR4-206ENST00000460616 C5P01031 1676 aa17.75■□□□□ 0.43
SSR4-206ENST00000460616 WDHD1O75717 1129 aaPredicted RBP17.75■□□□□ 0.43
SSR4-206ENST00000460616 DDX58O95786 925 aaKnown RBP17.75■□□□□ 0.43
SSR4-206ENST00000460616 TFCP2Q12800 502 aa17.75■□□□□ 0.43
SSR4-206ENST00000460616 SRGAP1Q7Z6B7 1085 aa17.75■□□□□ 0.43
SSR4-206ENST00000460616 HAUS7Q99871 368 aa17.75■□□□□ 0.43
SSR4-206ENST00000460616 EIF3JO75822 258 aaKnown RBP17.74■□□□□ 0.43
SSR4-206ENST00000460616 MARCKSP29966 332 aaPredicted RBP17.74■□□□□ 0.43
SSR4-206ENST00000460616 MAGEA9P43362 315 aa17.74■□□□□ 0.43
SSR4-206ENST00000460616 ADKP55263 362 aaKnown RBP17.74■□□□□ 0.43
SSR4-206ENST00000460616 INTS13Q9NVM9 706 aa17.74■□□□□ 0.43
SSR4-206ENST00000460616 RPS6KA5O75582 802 aa17.74■□□□□ 0.43
SSR4-206ENST00000460616 PNOCQ13519 176 aa17.74■□□□□ 0.43
SSR4-206ENST00000460616 KARSQ15046 597 aaKnown RBP17.74■□□□□ 0.43
SSR4-206ENST00000460616 TC2NQ8N9U0 490 aa17.74■□□□□ 0.43
SSR4-206ENST00000460616 DSCC1Q9BVC3 393 aa17.74■□□□□ 0.43
SSR4-206ENST00000460616 UBR2Q8IWV8 1755 aa17.74■□□□□ 0.43
SSR4-206ENST00000460616 SBF2Q86WG5 1849 aa17.74■□□□□ 0.43
SSR4-206ENST00000460616 A0A0G2JLW4 131 aa17.73■□□□□ 0.43
SSR4-206ENST00000460616 ERVV-2B6SEH9 535 aa17.73■□□□□ 0.43
SSR4-206ENST00000460616 PTF1AQ7RTS3 328 aa17.73■□□□□ 0.43
SSR4-206ENST00000460616 ANKZF1Q9H8Y5 726 aa17.73■□□□□ 0.43
SSR4-206ENST00000460616 SH3TC1Q8TE82 1336 aa17.73■□□□□ 0.43
SSR4-206ENST00000460616 PRAMEF22A3QJZ6 481 aa17.73■□□□□ 0.43
SSR4-206ENST00000460616 KCNQ2O43526 872 aa17.73■□□□□ 0.43
SSR4-206ENST00000460616 CUTAO60888 179 aa17.73■□□□□ 0.43
SSR4-206ENST00000460616 ERLIN1O75477 346 aa17.73■□□□□ 0.43
SSR4-206ENST00000460616 USP5P45974 858 aa17.73■□□□□ 0.43
SSR4-206ENST00000460616 SLC39A14Q15043 492 aa17.73■□□□□ 0.43
SSR4-206ENST00000460616 TTC31Q49AM3 519 aaPredicted RBP17.73■□□□□ 0.43
SSR4-206ENST00000460616 FOXR1Q6PIV2 292 aa17.73■□□□□ 0.43
SSR4-206ENST00000460616 KBTBD3Q8NAB2 608 aa17.73■□□□□ 0.43
SSR4-206ENST00000460616 PIGBQ92521 554 aa17.73■□□□□ 0.43
SSR4-206ENST00000460616 DESI2Q9BSY9 194 aa17.73■□□□□ 0.43
SSR4-206ENST00000460616 MROH7-TTC4A0A0A0MT08 1334 aa17.72■□□□□ 0.43
SSR4-206ENST00000460616 POTEB2H3BUK9 544 aa17.72■□□□□ 0.43
SSR4-206ENST00000460616 N4BP1O75113 896 aaKnown RBP17.72■□□□□ 0.43
SSR4-206ENST00000460616 IGKV5-2P06315 115 aa17.72■□□□□ 0.43
SSR4-206ENST00000460616 EPHA10Q5JZY3 1008 aa17.72■□□□□ 0.43
SSR4-206ENST00000460616 SPECC1LQ69YQ0 1117 aa17.72■□□□□ 0.43
SSR4-206ENST00000460616 MSL3Q8N5Y2 521 aaKnown RBP17.72■□□□□ 0.43
SSR4-206ENST00000460616 DBNDD2Q9BQY9 259 aa17.72■□□□□ 0.43
SSR4-206ENST00000460616 IRX2Q9BZI1 471 aaPredicted RBP17.72■□□□□ 0.43
SSR4-206ENST00000460616 GJB4Q9NTQ9 266 aa17.72■□□□□ 0.43
SSR4-206ENST00000460616 TMOD3Q9NYL9 352 aa17.72■□□□□ 0.43
SSR4-206ENST00000460616 PUF60Q9UHX1 559 aaKnown RBP17.72■□□□□ 0.43
SSR4-206ENST00000460616 FAN1Q9Y2M0 1017 aa17.72■□□□□ 0.43
SSR4-206ENST00000460616 HSP90AA4PQ58FG1 418 aa17.72■□□□□ 0.43
SSR4-206ENST00000460616 ZNF790Q6PG37 636 aa17.72■□□□□ 0.43
SSR4-206ENST00000460616 COPRSQ9NQ92 184 aa17.72■□□□□ 0.43
SSR4-206ENST00000460616 HELLSQ9NRZ9 838 aa17.72■□□□□ 0.43
SSR4-206ENST00000460616 RAB21Q9UL25 225 aa17.72■□□□□ 0.43
SSR4-206ENST00000460616 L1RE1Q9UN81 338 aa17.72■□□□□ 0.43
SSR4-206ENST00000460616 EIF3CLB5ME19 914 aaKnown RBP17.71■□□□□ 0.43
SSR4-206ENST00000460616 KIF28PB7ZC32 967 aa17.71■□□□□ 0.43
SSR4-206ENST00000460616 RIC3Q7Z5B4 369 aa17.71■□□□□ 0.43
SSR4-206ENST00000460616 PACS2Q86VP3 889 aa17.71■□□□□ 0.43
SSR4-206ENST00000460616 CEP112Q8N8E3 955 aa17.71■□□□□ 0.43
SSR4-206ENST00000460616 EIF3CQ99613 913 aaKnown RBP17.71■□□□□ 0.43
SSR4-206ENST00000460616 MKRN1Q9UHC7 482 aaKnown RBP17.71■□□□□ 0.43
SSR4-206ENST00000460616 JRKLQ9Y4A0 524 aa17.71■□□□□ 0.43
SSR4-206ENST00000460616 BCL9O00512 1426 aa17.71■□□□□ 0.43
SSR4-206ENST00000460616 HSPD1P10809 573 aaKnown RBP17.71■□□□□ 0.42
SSR4-206ENST00000460616 ABCB6Q9NP58 842 aa17.71■□□□□ 0.42
SSR4-206ENST00000460616 GEMIN8Q9NWZ8 242 aaKnown RBP17.71■□□□□ 0.42
SSR4-206ENST00000460616 HPSEQ9Y251 543 aa17.71■□□□□ 0.42
SSR4-206ENST00000460616 CCDC175P0C221 793 aa17.7■□□□□ 0.42
SSR4-206ENST00000460616 RXRBP28702 533 aa17.7■□□□□ 0.42
SSR4-206ENST00000460616 PNKPQ96T60 521 aa17.7■□□□□ 0.42
SSR4-206ENST00000460616 MRPL44Q9H9J2 332 aaKnown RBP17.7■□□□□ 0.42
SSR4-206ENST00000460616 GPHNQ9NQX3 736 aaPredicted RBP17.7■□□□□ 0.42
SSR4-206ENST00000460616 ASAP1Q9ULH1 1129 aa17.7■□□□□ 0.42
SSR4-206ENST00000460616 KCPQ6ZWJ8 1503 aa17.7■□□□□ 0.42
SSR4-206ENST00000460616 KIF23Q02241 960 aaPredicted RBP17.7■□□□□ 0.42
SSR4-206ENST00000460616 HSP90B2PQ58FF3 399 aa17.7■□□□□ 0.42
SSR4-206ENST00000460616 SHC4Q6S5L8 630 aa17.7■□□□□ 0.42
SSR4-206ENST00000460616 MSANTD4Q8NCY6 345 aa17.7■□□□□ 0.42
SSR4-206ENST00000460616 ZNF496Q96IT1 587 aaPredicted RBP17.7■□□□□ 0.42
SSR4-206ENST00000460616 LZTFL1Q9NQ48 299 aa17.7■□□□□ 0.42
SSR4-206ENST00000460616 CDC23Q9UJX2 597 aa17.7■□□□□ 0.42
SSR4-206ENST00000460616 TUBB4BP68371 445 aa17.69■□□□□ 0.42
SSR4-206ENST00000460616 NEXNQ0ZGT2 675 aa17.69■□□□□ 0.42
SSR4-206ENST00000460616 WWC2Q6AWC2 1192 aa17.69■□□□□ 0.42
SSR4-206ENST00000460616 FOXP4Q8IVH2 680 aaPredicted RBP17.69■□□□□ 0.42
SSR4-206ENST00000460616 FBXL16Q8N461 479 aa17.69■□□□□ 0.42
SSR4-206ENST00000460616 SUGCTQ9HAC7 445 aa17.69■□□□□ 0.42
SSR4-206ENST00000460616 BRMS1Q9HCU9 246 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms