RNA–Protein interactions for RNA: ENST00000459854.5

UFD1-205, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best)

Gene UFD1, Length 5,038 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-205ENST00000459854 NUCB1Q02818 461 aa11.04□□□□□ -0.64
UFD1-205ENST00000459854 TYRO3Q06418 890 aa11.04□□□□□ -0.64
UFD1-205ENST00000459854 USP48Q86UV5 1035 aa11.04□□□□□ -0.64
UFD1-205ENST00000459854 MRPS27Q92552 414 aaKnown RBP11.04□□□□□ -0.64
UFD1-205ENST00000459854 EVI5LQ96CN4 794 aa11.04□□□□□ -0.64
UFD1-205ENST00000459854 DRC1Q96MC2 740 aa11.04□□□□□ -0.64
UFD1-205ENST00000459854 SUDS3Q9H7L9 328 aaPredicted RBP11.04□□□□□ -0.64
UFD1-205ENST00000459854 TTC12Q9H892 705 aaPredicted RBP11.04□□□□□ -0.64
UFD1-205ENST00000459854 COL15A1P39059 1388 aa11.04□□□□□ -0.64
UFD1-205ENST00000459854 RGS12O14924 1447 aa11.04□□□□□ -0.64
UFD1-205ENST00000459854 PRAMEF22A3QJZ6 481 aa11.04□□□□□ -0.64
UFD1-205ENST00000459854 RBBP5Q15291 538 aaKnown RBP11.04□□□□□ -0.64
UFD1-205ENST00000459854 ELP1O95163 1332 aa11.04□□□□□ -0.64
UFD1-205ENST00000459854 A0A1W2PRG0 241 aa11.04□□□□□ -0.64
UFD1-205ENST00000459854 TNNC1P63316 161 aa11.04□□□□□ -0.64
UFD1-205ENST00000459854 CCDC174Q6PII3 467 aa11.04□□□□□ -0.64
UFD1-205ENST00000459854 TCHPQ9BT92 498 aa11.04□□□□□ -0.64
UFD1-205ENST00000459854 HOMER2Q9NSB8 354 aa11.04□□□□□ -0.64
UFD1-205ENST00000459854 FBXO3Q9UK99 471 aa11.04□□□□□ -0.64
UFD1-205ENST00000459854 SLC15A2Q16348 729 aa11.03□□□□□ -0.64
UFD1-205ENST00000459854 GIMAP6Q6P9H5 292 aa11.03□□□□□ -0.64
UFD1-205ENST00000459854 TTLL7Q6ZT98 887 aa11.03□□□□□ -0.64
UFD1-205ENST00000459854 G2E3Q7L622 706 aa11.03□□□□□ -0.64
UFD1-205ENST00000459854 SLC16A10Q8TF71 515 aa11.03□□□□□ -0.64
UFD1-205ENST00000459854 AKAP2Q9Y2D5 859 aa11.03□□□□□ -0.64
UFD1-205ENST00000459854 F13A1P00488 732 aa11.03□□□□□ -0.64
UFD1-205ENST00000459854 EVCP57679 992 aa11.03□□□□□ -0.64
UFD1-205ENST00000459854 TMEM266Q2M3C6 531 aa11.03□□□□□ -0.64
UFD1-205ENST00000459854 ANAPC4Q9UJX5 808 aa11.03□□□□□ -0.64
UFD1-205ENST00000459854 IKBKGQ9Y6K9 419 aa11.03□□□□□ -0.64
UFD1-205ENST00000459854 N4BP3O15049 544 aa11.03□□□□□ -0.64
UFD1-205ENST00000459854 BUB1BO60566 1050 aaPredicted RBP11.03□□□□□ -0.64
UFD1-205ENST00000459854 PPFIA1Q13136 1202 aa11.03□□□□□ -0.64
UFD1-205ENST00000459854 TRIM14Q14142 442 aa11.03□□□□□ -0.64
UFD1-205ENST00000459854 BRD3Q15059 726 aa11.03□□□□□ -0.64
UFD1-205ENST00000459854 LINC00116Q8NCU8 138 aa11.03□□□□□ -0.64
UFD1-205ENST00000459854 GOLGA5Q8TBA6 731 aa11.03□□□□□ -0.64
UFD1-205ENST00000459854 RPGRIP1Q96KN7 1286 aa11.03□□□□□ -0.64
UFD1-205ENST00000459854 VCX3BQ9H321 246 aa11.03□□□□□ -0.64
UFD1-205ENST00000459854 CCDC160A6NGH7 325 aa11.03□□□□□ -0.64
UFD1-205ENST00000459854 IRS4O14654 1257 aaPredicted RBP11.03□□□□□ -0.64
UFD1-205ENST00000459854 PPFIA4O75335 1185 aa11.03□□□□□ -0.64
UFD1-205ENST00000459854 ARHGAP24Q8N264 748 aa11.03□□□□□ -0.64
UFD1-205ENST00000459854 STMN2Q93045 179 aa11.03□□□□□ -0.64
UFD1-205ENST00000459854 PPP1R9BQ96SB3 815 aa11.03□□□□□ -0.64
UFD1-205ENST00000459854 ZNF287Q9HBT7 754 aa11.03□□□□□ -0.64
UFD1-205ENST00000459854 MRVI1Q9Y6F6 885 aa11.03□□□□□ -0.64
UFD1-205ENST00000459854 NDUFAB1O14561 156 aa11.02□□□□□ -0.64
UFD1-205ENST00000459854 AKR1B10O60218 316 aa11.02□□□□□ -0.64
UFD1-205ENST00000459854 PPP2R3AQ06190 1150 aa11.02□□□□□ -0.64
UFD1-205ENST00000459854 ITPK1Q13572 414 aa11.02□□□□□ -0.64
UFD1-205ENST00000459854 CCDC40Q4G0X9 1142 aa11.02□□□□□ -0.64
UFD1-205ENST00000459854 KLHL10Q6JEL2 608 aa11.02□□□□□ -0.64
UFD1-205ENST00000459854 JAKMIP2Q96AA8 810 aa11.02□□□□□ -0.64
UFD1-205ENST00000459854 ATP2A1O14983 1001 aa11.02□□□□□ -0.64
UFD1-205ENST00000459854 KIF5AQ12840 1032 aa11.02□□□□□ -0.64
UFD1-205ENST00000459854 CNGA4Q8IV77 575 aa11.02□□□□□ -0.64
UFD1-205ENST00000459854 RIOK3O14730 519 aaKnown RBP11.02□□□□□ -0.65
UFD1-205ENST00000459854 WHAMMP3Q1A5X7 153 aa11.02□□□□□ -0.65
UFD1-205ENST00000459854 CPLX3Q8WVH0 158 aa11.02□□□□□ -0.65
UFD1-205ENST00000459854 ARHGEF1Q92888 912 aaKnown RBP11.02□□□□□ -0.65
UFD1-205ENST00000459854 LRRC45Q96CN5 670 aa11.02□□□□□ -0.65
UFD1-205ENST00000459854 RGS17Q9UGC6 210 aaPredicted RBP11.02□□□□□ -0.65
UFD1-205ENST00000459854 MTRF1LQ9UGC7 380 aaKnown RBP11.02□□□□□ -0.65
UFD1-205ENST00000459854 CIB2O75838 187 aa11.02□□□□□ -0.65
UFD1-205ENST00000459854 MAP4K4O95819 1239 aaPredicted RBP11.02□□□□□ -0.65
UFD1-205ENST00000459854 PCK1P35558 622 aa11.02□□□□□ -0.65
UFD1-205ENST00000459854 PDE6BP35913 854 aa11.02□□□□□ -0.65
UFD1-205ENST00000459854 SSRP1Q08945 709 aaKnown RBP11.02□□□□□ -0.65
UFD1-205ENST00000459854 RUFY4Q6ZNE9 571 aa11.02□□□□□ -0.65
UFD1-205ENST00000459854 ZHX3Q9H4I2 956 aa11.02□□□□□ -0.65
UFD1-205ENST00000459854 TTF2Q9UNY4 1162 aaKnown RBP11.02□□□□□ -0.65
UFD1-205ENST00000459854 SYKP43405 635 aa11.01□□□□□ -0.65
UFD1-205ENST00000459854 ZBTB17Q13105 803 aa11.01□□□□□ -0.65
UFD1-205ENST00000459854 ZSCAN26Q16670 478 aa11.01□□□□□ -0.65
UFD1-205ENST00000459854 STXBP4Q6ZWJ1 553 aa11.01□□□□□ -0.65
UFD1-205ENST00000459854 PHLDB2Q86SQ0 1253 aa11.01□□□□□ -0.65
UFD1-205ENST00000459854 ZNF830Q96NB3 372 aaPredicted RBP11.01□□□□□ -0.65
UFD1-205ENST00000459854 RNF41Q9H4P4 317 aaPredicted RBP11.01□□□□□ -0.65
UFD1-205ENST00000459854 SPATS2LQ9NUQ6 558 aaKnown RBP11.01□□□□□ -0.65
UFD1-205ENST00000459854 TSNARE1Q96NA8 513 aa11.01□□□□□ -0.65
UFD1-205ENST00000459854 MAP7Q14244 749 aa11.01□□□□□ -0.65
UFD1-205ENST00000459854 CLUL1Q15846 466 aa11.01□□□□□ -0.65
UFD1-205ENST00000459854 PROSER3Q2NL68 480 aa11.01□□□□□ -0.65
UFD1-205ENST00000459854 RBM17Q96I25 401 aaKnown RBP11.01□□□□□ -0.65
UFD1-205ENST00000459854 FERMT1Q9BQL6 677 aa11.01□□□□□ -0.65
UFD1-205ENST00000459854 H0YIN7 160 aa11.01□□□□□ -0.65
UFD1-205ENST00000459854 PTGS1P23219 599 aa11.01□□□□□ -0.65
UFD1-205ENST00000459854 CWF19L2Q2TBE0 894 aaKnown RBP11.01□□□□□ -0.65
UFD1-205ENST00000459854 SYT10Q6XYQ8 523 aa11.01□□□□□ -0.65
UFD1-205ENST00000459854 CCDC85AQ96PX6 553 aaPredicted RBP11.01□□□□□ -0.65
UFD1-205ENST00000459854 IQCGQ9H095 443 aaKnown RBP11.01□□□□□ -0.65
UFD1-205ENST00000459854 CEP126Q9P2H0 1117 aa11.01□□□□□ -0.65
UFD1-205ENST00000459854 ATP2C2O75185 946 aa11□□□□□ -0.65
UFD1-205ENST00000459854 INTS8Q75QN2 995 aaKnown RBP11□□□□□ -0.65
UFD1-205ENST00000459854 CTNNBL1Q8WYA6 563 aaPredicted RBP11□□□□□ -0.65
UFD1-205ENST00000459854 HMGB1P1B2RPK0 211 aaPredicted RBP11□□□□□ -0.65
UFD1-205ENST00000459854 PPP1R2P41236 205 aa11□□□□□ -0.65
UFD1-205ENST00000459854 R3HDM1Q15032 1099 aaKnown RBP11□□□□□ -0.65
UFD1-205ENST00000459854 GPR161Q8N6U8 529 aaKnown RBP11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms