RNA–Protein interactions for RNA: ENST00000456040.1

R3HDM1-212, Transcript of R3H domain containing 1, humanhuman

TSL 5

Gene R3HDM1, Length 851 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-212ENST00000456040 FAM105AQ9NUU6 356 aa6.75□□□□□ -1.33
R3HDM1-212ENST00000456040 TMEM238LA0A1B0GVL6 79 aa6.74□□□□□ -1.33
R3HDM1-212ENST00000456040 CD8BP10966 210 aa6.74□□□□□ -1.33
R3HDM1-212ENST00000456040 HNRNPUQ00839 825 aaKnown RBP eCLIP6.74□□□□□ -1.33
R3HDM1-212ENST00000456040 GRM2Q14416 872 aa6.74□□□□□ -1.33
R3HDM1-212ENST00000456040 ANKLE2Q86XL3 938 aa6.74□□□□□ -1.33
R3HDM1-212ENST00000456040 KRTAP4-5Q9BYR2 181 aa6.74□□□□□ -1.33
R3HDM1-212ENST00000456040 LGR6Q9HBX8 967 aa6.74□□□□□ -1.33
R3HDM1-212ENST00000456040 ABCB6Q9NP58 842 aa6.74□□□□□ -1.33
R3HDM1-212ENST00000456040 MBNL3Q9NUK0 354 aaKnown RBP6.74□□□□□ -1.33
R3HDM1-212ENST00000456040 PRRG2O14669 202 aa6.73□□□□□ -1.33
R3HDM1-212ENST00000456040 B3GALT4O96024 378 aa6.73□□□□□ -1.33
R3HDM1-212ENST00000456040 MAPK8P45983 427 aa6.73□□□□□ -1.33
R3HDM1-212ENST00000456040 KCNMB1Q16558 191 aa6.73□□□□□ -1.33
R3HDM1-212ENST00000456040 RPS26P11Q5JNZ5 115 aaPredicted RBP6.73□□□□□ -1.33
R3HDM1-212ENST00000456040 SIAH1Q8IUQ4 282 aa6.73□□□□□ -1.33
R3HDM1-212ENST00000456040 LRRN4CLQ8ND94 238 aa6.73□□□□□ -1.33
R3HDM1-212ENST00000456040 C1GALT1Q9NS00 363 aa6.73□□□□□ -1.33
R3HDM1-212ENST00000456040 B8ZZF3 427 aa6.72□□□□□ -1.33
R3HDM1-212ENST00000456040 FMR1Q06787 632 aaKnown RBP eCLIP6.72□□□□□ -1.33
R3HDM1-212ENST00000456040 MLANAQ16655 118 aa6.72□□□□□ -1.33
R3HDM1-212ENST00000456040 IFI16Q16666 785 aaKnown RBP6.72□□□□□ -1.33
R3HDM1-212ENST00000456040 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.72□□□□□ -1.33
R3HDM1-212ENST00000456040 ANGEL2Q5VTE6 544 aaKnown RBP6.72□□□□□ -1.33
R3HDM1-212ENST00000456040 ZSWIM9Q86XI8 627 aa6.72□□□□□ -1.33
R3HDM1-212ENST00000456040 FBF1Q8TES7 1133 aa6.72□□□□□ -1.33
R3HDM1-212ENST00000456040 HRASLS5Q96KN8 279 aa6.72□□□□□ -1.33
R3HDM1-212ENST00000456040 BCO2Q9BYV7 579 aa6.72□□□□□ -1.33
R3HDM1-212ENST00000456040 PIDD1Q9HB75 910 aa6.72□□□□□ -1.33
R3HDM1-212ENST00000456040 TMEM265A0A087WTH1 108 aa6.71□□□□□ -1.34
R3HDM1-212ENST00000456040 XRCC5P13010 732 aaKnown RBP6.71□□□□□ -1.34
R3HDM1-212ENST00000456040 FCGRTP55899 365 aa6.71□□□□□ -1.34
R3HDM1-212ENST00000456040 ATP2B2Q01814 1243 aa6.71□□□□□ -1.34
R3HDM1-212ENST00000456040 MESP2Q0VG99 397 aa6.71□□□□□ -1.34
R3HDM1-212ENST00000456040 AOC3Q16853 763 aa6.71□□□□□ -1.34
R3HDM1-212ENST00000456040 PI16Q6UXB8 463 aa6.71□□□□□ -1.34
R3HDM1-212ENST00000456040 DTHD1Q6ZMT9 781 aa6.71□□□□□ -1.34
R3HDM1-212ENST00000456040 SND1Q7KZF4 910 aaKnown RBP eCLIP6.71□□□□□ -1.34
R3HDM1-212ENST00000456040 PLD6Q8N2A8 252 aaKnown RBP6.71□□□□□ -1.34
R3HDM1-212ENST00000456040 NRSN2Q9GZP1 204 aa6.71□□□□□ -1.34
R3HDM1-212ENST00000456040 NCANO14594 1321 aa6.71□□□□□ -1.34
R3HDM1-212ENST00000456040 FAM87AP0C7U9 286 aa6.7□□□□□ -1.34
R3HDM1-212ENST00000456040 PDE3AQ14432 1141 aa6.7□□□□□ -1.34
R3HDM1-212ENST00000456040 ALG1LQ6GMV1 187 aa6.7□□□□□ -1.34
R3HDM1-212ENST00000456040 SLC23A3Q6PIS1 610 aa6.7□□□□□ -1.34
R3HDM1-212ENST00000456040 SEZ6L2Q6UXD5 910 aa6.7□□□□□ -1.34
R3HDM1-212ENST00000456040 LRRC56Q8IYG6 542 aaPredicted RBP6.7□□□□□ -1.34
R3HDM1-212ENST00000456040 MKNK2Q9HBH9 465 aa6.7□□□□□ -1.34
R3HDM1-212ENST00000456040 TSPAN15O95858 294 aa6.69□□□□□ -1.34
R3HDM1-212ENST00000456040 CFPP27918 469 aa6.69□□□□□ -1.34
R3HDM1-212ENST00000456040 AP3B2Q13367 1082 aa6.69□□□□□ -1.34
R3HDM1-212ENST00000456040 NXPE4Q6UWF7 544 aa6.69□□□□□ -1.34
R3HDM1-212ENST00000456040 FAM181AQ8N9Y4 354 aa6.69□□□□□ -1.34
R3HDM1-212ENST00000456040 TRIM56Q9BRZ2 755 aaKnown RBP6.69□□□□□ -1.34
R3HDM1-212ENST00000456040 GSX1Q9H4S2 264 aaPredicted RBP6.69□□□□□ -1.34
R3HDM1-212ENST00000456040 ADAMTS6Q9UKP5 1117 aa6.69□□□□□ -1.34
R3HDM1-212ENST00000456040 GIPC1O14908 333 aa6.68□□□□□ -1.34
R3HDM1-212ENST00000456040 DYNC1LI2O43237 492 aaPredicted RBP6.68□□□□□ -1.34
R3HDM1-212ENST00000456040 SLFN14P0C7P3 912 aa6.68□□□□□ -1.34
R3HDM1-212ENST00000456040 ZSCAN22P10073 491 aaPredicted RBP6.68□□□□□ -1.34
R3HDM1-212ENST00000456040 PPP2R3AQ06190 1150 aa6.68□□□□□ -1.34
R3HDM1-212ENST00000456040 WFDC3Q8IUB2 231 aa6.68□□□□□ -1.34
R3HDM1-212ENST00000456040 FLAD1Q8NFF5 587 aa6.68□□□□□ -1.34
R3HDM1-212ENST00000456040 SRCIN1Q9C0H9 1055 aa6.68□□□□□ -1.34
R3HDM1-212ENST00000456040 AOC2O75106 756 aa6.67□□□□□ -1.34
R3HDM1-212ENST00000456040 P4HBP07237 508 aaKnown RBP6.67□□□□□ -1.34
R3HDM1-212ENST00000456040 AFMP43652 599 aa6.67□□□□□ -1.34
R3HDM1-212ENST00000456040 ZNF157P51786 506 aaPredicted RBP6.67□□□□□ -1.34
R3HDM1-212ENST00000456040 FAAP100Q0VG06 881 aa6.67□□□□□ -1.34
R3HDM1-212ENST00000456040 MPZL3Q6UWV2 235 aa6.67□□□□□ -1.34
R3HDM1-212ENST00000456040 ATXN3LQ9H3M9 355 aa6.67□□□□□ -1.34
R3HDM1-212ENST00000456040 TMEM39AQ9NV64 488 aa6.67□□□□□ -1.34
R3HDM1-212ENST00000456040 GPN3Q9UHW5 284 aaPredicted RBP6.67□□□□□ -1.34
R3HDM1-212ENST00000456040 WWC3Q9ULE0 1092 aa6.67□□□□□ -1.34
R3HDM1-212ENST00000456040 SPG7Q9UQ90 795 aa6.67□□□□□ -1.34
R3HDM1-212ENST00000456040 AKAP2Q9Y2D5 859 aa6.67□□□□□ -1.34
R3HDM1-212ENST00000456040 SYNGAP1Q96PV0 1343 aa6.67□□□□□ -1.34
R3HDM1-212ENST00000456040 KRTAP9-7A8MTY7 169 aa6.66□□□□□ -1.34
R3HDM1-212ENST00000456040 NFIBO00712 420 aa6.66□□□□□ -1.34
R3HDM1-212ENST00000456040 LDHBP07195 334 aaKnown RBP6.66□□□□□ -1.34
R3HDM1-212ENST00000456040 GSTT1P30711 240 aa6.66□□□□□ -1.34
R3HDM1-212ENST00000456040 CDK5R2Q13319 367 aa6.66□□□□□ -1.34
R3HDM1-212ENST00000456040 LCE5AQ5TCM9 118 aa6.66□□□□□ -1.34
R3HDM1-212ENST00000456040 SYDE1Q6ZW31 735 aaPredicted RBP6.66□□□□□ -1.34
R3HDM1-212ENST00000456040 SETDB2Q96T68 719 aa6.66□□□□□ -1.34
R3HDM1-212ENST00000456040 RAPGEFL1Q9UHV5 662 aa6.66□□□□□ -1.34
R3HDM1-212ENST00000456040 CEACAM5P06731 702 aa6.65□□□□□ -1.34
R3HDM1-212ENST00000456040 CTSBP07858 339 aa6.65□□□□□ -1.34
R3HDM1-212ENST00000456040 FGD1P98174 961 aa6.65□□□□□ -1.34
R3HDM1-212ENST00000456040 ASB11Q8WXH4 323 aa6.65□□□□□ -1.34
R3HDM1-212ENST00000456040 FRMD6Q96NE9 622 aa6.65□□□□□ -1.34
R3HDM1-212ENST00000456040 ANKRD33BA6NCL7 494 aa6.64□□□□□ -1.35
R3HDM1-212ENST00000456040 ECEL1O95672 775 aa6.64□□□□□ -1.35
R3HDM1-212ENST00000456040 CD96P40200 585 aa6.64□□□□□ -1.35
R3HDM1-212ENST00000456040 SMYD4Q8IYR2 804 aaPredicted RBP6.64□□□□□ -1.35
R3HDM1-212ENST00000456040 C3orf58Q8NDZ4 430 aa6.64□□□□□ -1.35
R3HDM1-212ENST00000456040 OSBPL7Q9BZF2 842 aa6.64□□□□□ -1.35
R3HDM1-212ENST00000456040 SNX11Q9Y5W9 270 aa6.64□□□□□ -1.35
R3HDM1-212ENST00000456040 RNGTTO60942 597 aaKnown RBP6.63□□□□□ -1.35
R3HDM1-212ENST00000456040 GSTP1P09211 210 aaKnown RBP6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms