RNA–Protein interactions for RNA: ENST00000455546.6

GTF3C3-208, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 4

Gene GTF3C3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-208ENST00000455546 SCARF1Q14162 830 aa6□□□□□ -1.45
GTF3C3-208ENST00000455546 KIF4BQ2VIQ3 1234 aa6□□□□□ -1.45
GTF3C3-208ENST00000455546 LINC01559Q495D7 138 aa6□□□□□ -1.45
GTF3C3-208ENST00000455546 PRAMEF18Q5VWM3 479 aa6□□□□□ -1.45
GTF3C3-208ENST00000455546 PTCRAQ6ISU1 281 aaPredicted RBP6□□□□□ -1.45
GTF3C3-208ENST00000455546 UBE3BQ7Z3V4 1068 aa6□□□□□ -1.45
GTF3C3-208ENST00000455546 TXNRD3Q86VQ6 643 aa6□□□□□ -1.45
GTF3C3-208ENST00000455546 FAM9BQ8IZU0 186 aa6□□□□□ -1.45
GTF3C3-208ENST00000455546 PNMA1Q8ND90 353 aa6□□□□□ -1.45
GTF3C3-208ENST00000455546 STK31Q9BXU1 1019 aa6□□□□□ -1.45
GTF3C3-208ENST00000455546 MINPP1Q9UNW1 487 aa6□□□□□ -1.45
GTF3C3-208ENST00000455546 SNAP23O00161 211 aa5.99□□□□□ -1.45
GTF3C3-208ENST00000455546 HSP90B1P14625 803 aaKnown RBP5.99□□□□□ -1.45
GTF3C3-208ENST00000455546 RFX1P22670 979 aa5.99□□□□□ -1.45
GTF3C3-208ENST00000455546 ATP2B4P23634 1241 aa5.99□□□□□ -1.45
GTF3C3-208ENST00000455546 RPS12P25398 132 aaKnown RBP5.99□□□□□ -1.45
GTF3C3-208ENST00000455546 KLRK1P26718 216 aa5.99□□□□□ -1.45
GTF3C3-208ENST00000455546 MAP2K2P36507 400 aa5.99□□□□□ -1.45
GTF3C3-208ENST00000455546 NEXNQ0ZGT2 675 aa5.99□□□□□ -1.45
GTF3C3-208ENST00000455546 FKBP5Q13451 457 aaPredicted RBP5.99□□□□□ -1.45
GTF3C3-208ENST00000455546 GCKRQ14397 625 aa5.99□□□□□ -1.45
GTF3C3-208ENST00000455546 CCDC27Q2M243 656 aa5.99□□□□□ -1.45
GTF3C3-208ENST00000455546 ANGEL2Q5VTE6 544 aaKnown RBP5.99□□□□□ -1.45
GTF3C3-208ENST00000455546 SPNS2Q8IVW8 549 aa5.99□□□□□ -1.45
GTF3C3-208ENST00000455546 CDC5LQ99459 802 aaKnown RBP5.99□□□□□ -1.45
GTF3C3-208ENST00000455546 UNC93B1Q9H1C4 597 aa5.99□□□□□ -1.45
GTF3C3-208ENST00000455546 GBA2Q9HCG7 927 aaPredicted RBP5.99□□□□□ -1.45
GTF3C3-208ENST00000455546 EVA1BQ9NVM1 165 aa5.99□□□□□ -1.45
GTF3C3-208ENST00000455546 BSDC1Q9NW68 430 aaPredicted RBP5.99□□□□□ -1.45
GTF3C3-208ENST00000455546 FCF1Q9Y324 198 aaKnown RBP5.99□□□□□ -1.45
GTF3C3-208ENST00000455546 PSME4Q14997 1843 aa5.99□□□□□ -1.45
GTF3C3-208ENST00000455546 XDHP47989 1333 aa5.99□□□□□ -1.45
GTF3C3-208ENST00000455546 CDHR2Q9BYE9 1310 aa5.99□□□□□ -1.45
GTF3C3-208ENST00000455546 FANCIQ9NVI1 1328 aa5.99□□□□□ -1.45
GTF3C3-208ENST00000455546 USP17L3A6NCW0 530 aa5.98□□□□□ -1.45
GTF3C3-208ENST00000455546 USP17L4A6NCW7 530 aa5.98□□□□□ -1.45
GTF3C3-208ENST00000455546 CCDC85CA6NKD9 419 aa5.98□□□□□ -1.45
GTF3C3-208ENST00000455546 ZBBXA8MT70 800 aa5.98□□□□□ -1.45
GTF3C3-208ENST00000455546 FAM155AB1AL88 458 aaPredicted RBP5.98□□□□□ -1.45
GTF3C3-208ENST00000455546 ANP32CO43423 234 aa5.98□□□□□ -1.45
GTF3C3-208ENST00000455546 TAF5LO75529 589 aa5.98□□□□□ -1.45
GTF3C3-208ENST00000455546 ITGA6P23229 1130 aa5.98□□□□□ -1.45
GTF3C3-208ENST00000455546 CCT4P50991 539 aaKnown RBP5.98□□□□□ -1.45
GTF3C3-208ENST00000455546 ZNF157P51786 506 aaPredicted RBP5.98□□□□□ -1.45
GTF3C3-208ENST00000455546 CASP7P55210 303 aa5.98□□□□□ -1.45
GTF3C3-208ENST00000455546 NR1H3Q13133 447 aa5.98□□□□□ -1.45
GTF3C3-208ENST00000455546 SEMA3FQ13275 785 aa5.98□□□□□ -1.45
GTF3C3-208ENST00000455546 NBPF9Q3BBW0 867 aa5.98□□□□□ -1.45
GTF3C3-208ENST00000455546 RGMBQ6NW40 437 aa5.98□□□□□ -1.45
GTF3C3-208ENST00000455546 MOB2Q70IA6 237 aa5.98□□□□□ -1.45
GTF3C3-208ENST00000455546 USP17L1Q7RTZ2 530 aa5.98□□□□□ -1.45
GTF3C3-208ENST00000455546 C2orf69Q8N8R5 385 aa5.98□□□□□ -1.45
GTF3C3-208ENST00000455546 AGBL3Q8NEM8 1001 aa5.98□□□□□ -1.45
GTF3C3-208ENST00000455546 DNAAF4Q8WXU2 420 aa5.98□□□□□ -1.45
GTF3C3-208ENST00000455546 ABHD8Q96I13 439 aa5.98□□□□□ -1.45
GTF3C3-208ENST00000455546 GMLQ99445 158 aa5.98□□□□□ -1.45
GTF3C3-208ENST00000455546 CHMP4AQ9BY43 222 aa5.98□□□□□ -1.45
GTF3C3-208ENST00000455546 MYOZ2Q9NPC6 264 aa5.98□□□□□ -1.45
GTF3C3-208ENST00000455546 GGA3Q9NZ52 723 aa5.98□□□□□ -1.45
GTF3C3-208ENST00000455546 PLIN1O60240 522 aa5.97□□□□□ -1.45
GTF3C3-208ENST00000455546 CSF1RP07333 972 aa5.97□□□□□ -1.45
GTF3C3-208ENST00000455546 IGHMBP2P38935 993 aaKnown RBP5.97□□□□□ -1.45
GTF3C3-208ENST00000455546 ZNF280AP59817 542 aaPredicted RBP5.97□□□□□ -1.45
GTF3C3-208ENST00000455546 FOXO4P98177 505 aa5.97□□□□□ -1.45
GTF3C3-208ENST00000455546 KIF23Q02241 960 aaPredicted RBP5.97□□□□□ -1.45
GTF3C3-208ENST00000455546 CHRNDQ07001 517 aa5.97□□□□□ -1.45
GTF3C3-208ENST00000455546 TTLL5Q6EMB2 1281 aa5.97□□□□□ -1.45
GTF3C3-208ENST00000455546 PODNQ7Z5L7 613 aa5.97□□□□□ -1.45
GTF3C3-208ENST00000455546 WDR63Q8IWG1 891 aa5.97□□□□□ -1.45
GTF3C3-208ENST00000455546 CDCA5Q96FF9 252 aa5.97□□□□□ -1.45
GTF3C3-208ENST00000455546 ZNF594Q96JF6 807 aaPredicted RBP5.97□□□□□ -1.45
GTF3C3-208ENST00000455546 HHIPL1Q96JK4 782 aa5.97□□□□□ -1.45
GTF3C3-208ENST00000455546 UCN2Q96RP3 112 aa5.97□□□□□ -1.45
GTF3C3-208ENST00000455546 MPHOSPH8Q99549 860 aa5.97□□□□□ -1.45
GTF3C3-208ENST00000455546 PLA2G12BQ9BX93 195 aa5.97□□□□□ -1.45
GTF3C3-208ENST00000455546 ALG2Q9H553 416 aa5.97□□□□□ -1.45
GTF3C3-208ENST00000455546 CHMP3Q9Y3E7 222 aa5.97□□□□□ -1.45
GTF3C3-208ENST00000455546 ZNF804BA4D1E1 1349 aa5.97□□□□□ -1.45
GTF3C3-208ENST00000455546 IL16Q14005 1332 aa5.97□□□□□ -1.45
GTF3C3-208ENST00000455546 ANKRD18BA2A2Z9 1011 aa5.96□□□□□ -1.46
GTF3C3-208ENST00000455546 UBE2Q2LH0YL09 131 aa5.96□□□□□ -1.46
GTF3C3-208ENST00000455546 PIK3CDO00329 1044 aa5.96□□□□□ -1.46
GTF3C3-208ENST00000455546 TRPA1O75762 1119 aa5.96□□□□□ -1.46
GTF3C3-208ENST00000455546 GTF2IP78347 998 aa5.96□□□□□ -1.46
GTF3C3-208ENST00000455546 KCNC4Q03721 635 aa5.96□□□□□ -1.46
GTF3C3-208ENST00000455546 NOGQ13253 232 aa5.96□□□□□ -1.46
GTF3C3-208ENST00000455546 PRKG1Q13976 671 aa5.96□□□□□ -1.46
GTF3C3-208ENST00000455546 EPHA10Q5JZY3 1008 aa5.96□□□□□ -1.46
GTF3C3-208ENST00000455546 DACT2Q5SW24 774 aa5.96□□□□□ -1.46
GTF3C3-208ENST00000455546 BEND3Q5T5X7 828 aa5.96□□□□□ -1.46
GTF3C3-208ENST00000455546 SLC4A10Q6U841 1118 aa5.96□□□□□ -1.46
GTF3C3-208ENST00000455546 KIAA0825Q8IV33 1275 aa5.96□□□□□ -1.46
GTF3C3-208ENST00000455546 LINS1Q8NG48 757 aa5.96□□□□□ -1.46
GTF3C3-208ENST00000455546 BAP1Q92560 729 aa5.96□□□□□ -1.46
GTF3C3-208ENST00000455546 CSRNP1Q96S65 589 aa5.96□□□□□ -1.46
GTF3C3-208ENST00000455546 OCSTAMPQ9BR26 566 aa5.96□□□□□ -1.46
GTF3C3-208ENST00000455546 COA1Q9GZY4 146 aa5.96□□□□□ -1.46
GTF3C3-208ENST00000455546 MYH16Q9H6N6 1097 aa5.96□□□□□ -1.46
GTF3C3-208ENST00000455546 RNF186Q9NXI6 227 aa5.96□□□□□ -1.46
GTF3C3-208ENST00000455546 HCSTQ9UBK5 93 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms