RNA–Protein interactions for RNA: ENST00000454428.5

UBE2D4-209, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 3

Gene UBE2D4, Length 288 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-209ENST00000454428 DIS3LQ8TF46 1054 aaKnown RBP21.63■■□□□ 1.05
UBE2D4-209ENST00000454428 GDF15Q99988 308 aa21.63■■□□□ 1.05
UBE2D4-209ENST00000454428 TFRCP02786 760 aaKnown RBP21.62■■□□□ 1.05
UBE2D4-209ENST00000454428 PRDX5P30044 214 aa21.62■■□□□ 1.05
UBE2D4-209ENST00000454428 PUM3Q15397 648 aaKnown RBP21.62■■□□□ 1.05
UBE2D4-209ENST00000454428 PAWRQ96IZ0 340 aaKnown RBP21.62■■□□□ 1.05
UBE2D4-209ENST00000454428 SALL2Q9Y467 1007 aaPredicted RBP21.62■■□□□ 1.05
UBE2D4-209ENST00000454428 AFG3L2Q9Y4W6 797 aa21.62■■□□□ 1.05
UBE2D4-209ENST00000454428 SLURP2P0DP57 97 aa21.61■■□□□ 1.05
UBE2D4-209ENST00000454428 PTPRAP18433 802 aa21.61■■□□□ 1.05
UBE2D4-209ENST00000454428 WDR66Q8TBY9 1149 aa21.61■■□□□ 1.05
UBE2D4-209ENST00000454428 ZHX2Q9Y6X8 837 aa21.61■■□□□ 1.05
UBE2D4-209ENST00000454428 IFIT1P09914 478 aaKnown RBP21.6■■□□□ 1.05
UBE2D4-209ENST00000454428 MNX1P50219 401 aaPredicted RBP21.6■■□□□ 1.05
UBE2D4-209ENST00000454428 SH3BP5LQ7L8J4 393 aa21.6■■□□□ 1.05
UBE2D4-209ENST00000454428 FASTKD5Q7L8L6 764 aaKnown RBP21.6■■□□□ 1.05
UBE2D4-209ENST00000454428 SCYL3Q8IZE3 742 aa21.6■■□□□ 1.05
UBE2D4-209ENST00000454428 SLC45A1Q9Y2W3 748 aa21.6■■□□□ 1.05
UBE2D4-209ENST00000454428 DOCK1Q14185 1865 aa21.6■■□□□ 1.05
UBE2D4-209ENST00000454428 EYSQ5T1H1 3165 aa21.59■■□□□ 1.05
UBE2D4-209ENST00000454428 TNPO2O14787 897 aaKnown RBP21.59■■□□□ 1.05
UBE2D4-209ENST00000454428 CAPN2P17655 700 aa21.59■■□□□ 1.05
UBE2D4-209ENST00000454428 BMP8BP34820 402 aa21.59■■□□□ 1.05
UBE2D4-209ENST00000454428 USP40Q9NVE5 1235 aa21.59■■□□□ 1.05
UBE2D4-209ENST00000454428 RFX7Q2KHR2 1363 aa21.59■■□□□ 1.05
UBE2D4-209ENST00000454428 RFX5P48382 616 aaPredicted RBP21.58■■□□□ 1.05
UBE2D4-209ENST00000454428 MAP3K10Q02779 954 aa21.58■■□□□ 1.05
UBE2D4-209ENST00000454428 GADL1Q6ZQY3 521 aa21.58■■□□□ 1.05
UBE2D4-209ENST00000454428 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.58■■□□□ 1.05
UBE2D4-209ENST00000454428 SPTBN5Q9NRC6 3674 aaKnown RBP21.58■■□□□ 1.04
UBE2D4-209ENST00000454428 GPR153Q6NV75 609 aa21.57■■□□□ 1.04
UBE2D4-209ENST00000454428 Q7L0L9 218 aa21.57■■□□□ 1.04
UBE2D4-209ENST00000454428 LPIN2Q92539 896 aa21.57■■□□□ 1.04
UBE2D4-209ENST00000454428 MYH2Q9UKX2 1941 aa21.57■■□□□ 1.04
UBE2D4-209ENST00000454428 RGS3P49796 1198 aa21.56■■□□□ 1.04
UBE2D4-209ENST00000454428 NECAB2Q7Z6G3 386 aa21.56■■□□□ 1.04
UBE2D4-209ENST00000454428 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.56■■□□□ 1.04
UBE2D4-209ENST00000454428 PICK1Q9NRD5 415 aa21.56■■□□□ 1.04
UBE2D4-209ENST00000454428 DDX60LQ5H9U9 1706 aaKnown RBP21.55■■□□□ 1.04
UBE2D4-209ENST00000454428 SLC5A1P13866 664 aa21.55■■□□□ 1.04
UBE2D4-209ENST00000454428 ATG9AQ7Z3C6 839 aa21.55■■□□□ 1.04
UBE2D4-209ENST00000454428 CCDC84Q86UT8 332 aaPredicted RBP21.55■■□□□ 1.04
UBE2D4-209ENST00000454428 C7orf61Q8IZ16 206 aa21.55■■□□□ 1.04
UBE2D4-209ENST00000454428 DEFB123Q8N688 67 aa21.55■■□□□ 1.04
UBE2D4-209ENST00000454428 ANKRD13CQ8N6S4 541 aa21.55■■□□□ 1.04
UBE2D4-209ENST00000454428 IDI2Q9BXS1 227 aa21.55■■□□□ 1.04
UBE2D4-209ENST00000454428 ZMYND8Q9ULU4 1186 aaPredicted RBP21.55■■□□□ 1.04
UBE2D4-209ENST00000454428 PLXNB2O15031 1838 aa21.55■■□□□ 1.04
UBE2D4-209ENST00000454428 DNAH12Q6ZR08 3092 aa21.54■■□□□ 1.04
UBE2D4-209ENST00000454428 DDTLA6NHG4 134 aaPredicted RBP21.54■■□□□ 1.04
UBE2D4-209ENST00000454428 EYA2O00167 538 aa21.54■■□□□ 1.04
UBE2D4-209ENST00000454428 LDHBP07195 334 aaKnown RBP21.54■■□□□ 1.04
UBE2D4-209ENST00000454428 TREML2Q5T2D2 321 aa21.54■■□□□ 1.04
UBE2D4-209ENST00000454428 SMCR8Q8TEV9 937 aaPredicted RBP21.54■■□□□ 1.04
UBE2D4-209ENST00000454428 USP44Q9H0E7 712 aa21.54■■□□□ 1.04
UBE2D4-209ENST00000454428 TAOK2Q9UL54 1235 aa21.54■■□□□ 1.04
UBE2D4-209ENST00000454428 SALL1Q9NSC2 1324 aa21.54■■□□□ 1.04
UBE2D4-209ENST00000454428 LOC285556D6RIA3 1793 aa21.53■■□□□ 1.04
UBE2D4-209ENST00000454428 TRIM75PA6NK02 468 aa21.53■■□□□ 1.04
UBE2D4-209ENST00000454428 ENTPD3O75355 529 aa21.53■■□□□ 1.04
UBE2D4-209ENST00000454428 TRIM32Q13049 653 aa21.53■■□□□ 1.04
UBE2D4-209ENST00000454428 ANKLE1Q8NAG6 615 aa21.53■■□□□ 1.04
UBE2D4-209ENST00000454428 DDX4Q9NQI0 724 aaKnown RBP21.53■■□□□ 1.04
UBE2D4-209ENST00000454428 AGTPBP1Q9UPW5 1226 aa21.53■■□□□ 1.04
UBE2D4-209ENST00000454428 GAKO14976 1311 aa21.53■■□□□ 1.04
UBE2D4-209ENST00000454428 CTNND1O60716 968 aaKnown RBP21.52■■□□□ 1.04
UBE2D4-209ENST00000454428 ZEB1P37275 1124 aaPredicted RBP21.52■■□□□ 1.04
UBE2D4-209ENST00000454428 LRIT3Q3SXY7 679 aa21.52■■□□□ 1.04
UBE2D4-209ENST00000454428 COA7Q96BR5 231 aa21.52■■□□□ 1.04
UBE2D4-209ENST00000454428 GJD2Q9UKL4 321 aa21.52■■□□□ 1.04
UBE2D4-209ENST00000454428 STXBP5LQ9Y2K9 1186 aa21.52■■□□□ 1.04
UBE2D4-209ENST00000454428 SYN1P17600 705 aa21.51■■□□□ 1.03
UBE2D4-209ENST00000454428 MAGEA10P43363 369 aaPredicted RBP21.51■■□□□ 1.03
UBE2D4-209ENST00000454428 FAM110CQ1W6H9 321 aa21.51■■□□□ 1.03
UBE2D4-209ENST00000454428 MRPL50Q8N5N7 158 aaKnown RBP21.51■■□□□ 1.03
UBE2D4-209ENST00000454428 MTMR10Q9NXD2 777 aa21.51■■□□□ 1.03
UBE2D4-209ENST00000454428 HMGCRP04035 888 aa21.5■■□□□ 1.03
UBE2D4-209ENST00000454428 PHKA1P46020 1223 aa21.5■■□□□ 1.03
UBE2D4-209ENST00000454428 LRRFIP2Q9Y608 721 aaKnown RBP21.5■■□□□ 1.03
UBE2D4-209ENST00000454428 CDH23Q9H251 3354 aa21.5■■□□□ 1.03
UBE2D4-209ENST00000454428 ZSCAN29Q8IWY8 852 aaPredicted RBP21.48■■□□□ 1.03
UBE2D4-209ENST00000454428 TDHQ8IZJ6 230 aa21.48■■□□□ 1.03
UBE2D4-209ENST00000454428 NBPF3Q9H094 633 aa21.48■■□□□ 1.03
UBE2D4-209ENST00000454428 RPTORQ8N122 1335 aa21.48■■□□□ 1.03
UBE2D4-209ENST00000454428 ATAD5Q96QE3 1844 aa21.48■■□□□ 1.03
UBE2D4-209ENST00000454428 ZBTB22O15209 634 aa21.47■■□□□ 1.03
UBE2D4-209ENST00000454428 ATP2B3Q16720 1220 aa21.47■■□□□ 1.03
UBE2D4-209ENST00000454428 C11orf49Q9H6J7 331 aa21.47■■□□□ 1.03
UBE2D4-209ENST00000454428 OGDHLQ9ULD0 1010 aa21.47■■□□□ 1.03
UBE2D4-209ENST00000454428 DENND2AQ9ULE3 1009 aa21.47■■□□□ 1.03
UBE2D4-209ENST00000454428 PFASO15067 1338 aa21.47■■□□□ 1.03
UBE2D4-209ENST00000454428 PRUNE2Q8WUY3 3088 aa21.46■■□□□ 1.03
UBE2D4-209ENST00000454428 SEMA3EO15041 775 aa21.46■■□□□ 1.03
UBE2D4-209ENST00000454428 PROCA1Q8NCQ7 364 aaPredicted RBP21.46■■□□□ 1.03
UBE2D4-209ENST00000454428 COL25A1Q9BXS0 654 aaPredicted RBP21.46■■□□□ 1.03
UBE2D4-209ENST00000454428 HMX1Q9NP08 348 aaPredicted RBP21.46■■□□□ 1.03
UBE2D4-209ENST00000454428 PNMA3Q9UL41 463 aa21.46■■□□□ 1.03
UBE2D4-209ENST00000454428 FAM196BA6NMK8 535 aa21.45■■□□□ 1.02
UBE2D4-209ENST00000454428 TBC1D12O60347 775 aa21.45■■□□□ 1.02
UBE2D4-209ENST00000454428 ADORA1P30542 326 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 118.4 ms