RNA–Protein interactions for RNA: ENST00000449502.5

RFC4-210, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-210ENST00000449502 LRRC37AA6NMS7 1700 aa11.4□□□□□ -0.58
RFC4-210ENST00000449502 IFIT3O14879 490 aaKnown RBP11.4□□□□□ -0.58
RFC4-210ENST00000449502 RANBP6O60518 1105 aaKnown RBP11.4□□□□□ -0.58
RFC4-210ENST00000449502 KDM4AO75164 1064 aa11.4□□□□□ -0.58
RFC4-210ENST00000449502 NT5C2P49902 561 aa11.4□□□□□ -0.58
RFC4-210ENST00000449502 EIF6P56537 245 aaKnown RBP11.4□□□□□ -0.58
RFC4-210ENST00000449502 STK3Q13188 491 aa11.4□□□□□ -0.58
RFC4-210ENST00000449502 TNIP1Q15025 636 aa11.4□□□□□ -0.58
RFC4-210ENST00000449502 TMEM67Q5HYA8 995 aa11.4□□□□□ -0.58
RFC4-210ENST00000449502 CIAPIN1Q6FI81 312 aa11.4□□□□□ -0.58
RFC4-210ENST00000449502 CCDC83Q8IWF9 413 aa11.4□□□□□ -0.58
RFC4-210ENST00000449502 NLGN2Q8NFZ4 835 aa11.4□□□□□ -0.58
RFC4-210ENST00000449502 ZDHHC15Q96MV8 337 aa11.4□□□□□ -0.58
RFC4-210ENST00000449502 MKNK2Q9HBH9 465 aa11.4□□□□□ -0.58
RFC4-210ENST00000449502 KCNQ5Q9NR82 932 aa11.4□□□□□ -0.58
RFC4-210ENST00000449502 TMOD2Q9NZR1 351 aa11.4□□□□□ -0.58
RFC4-210ENST00000449502 SAP30BPQ9UHR5 308 aaKnown RBP11.4□□□□□ -0.58
RFC4-210ENST00000449502 SERPINA10Q9UK55 444 aa11.4□□□□□ -0.58
RFC4-210ENST00000449502 NEDD4P46934 1319 aa11.39□□□□□ -0.59
RFC4-210ENST00000449502 CCDC69A6NI79 296 aa11.39□□□□□ -0.59
RFC4-210ENST00000449502 YDJCA8MPS7 323 aa11.39□□□□□ -0.59
RFC4-210ENST00000449502 PSMD14O00487 310 aa11.39□□□□□ -0.59
RFC4-210ENST00000449502 DHX16O60231 1041 aaKnown RBP11.39□□□□□ -0.59
RFC4-210ENST00000449502 HLA-DOAP06340 250 aa11.39□□□□□ -0.59
RFC4-210ENST00000449502 USP17L8P0C7I0 530 aa11.39□□□□□ -0.59
RFC4-210ENST00000449502 APOBRQ0VD83 1088 aa11.39□□□□□ -0.59
RFC4-210ENST00000449502 PICALMQ13492 652 aa11.39□□□□□ -0.59
RFC4-210ENST00000449502 TOB2Q14106 344 aaPredicted RBP11.39□□□□□ -0.59
RFC4-210ENST00000449502 ME3Q16798 604 aa11.39□□□□□ -0.59
RFC4-210ENST00000449502 ARHGAP27Q6ZUM4 889 aa11.39□□□□□ -0.59
RFC4-210ENST00000449502 ILDR2Q71H61 639 aa11.39□□□□□ -0.59
RFC4-210ENST00000449502 TTC6Q86TZ1 520 aa11.39□□□□□ -0.59
RFC4-210ENST00000449502 IQCA1Q86XH1 822 aa11.39□□□□□ -0.59
RFC4-210ENST00000449502 TMTC2Q8N394 836 aa11.39□□□□□ -0.59
RFC4-210ENST00000449502 NECAB1Q8N987 351 aa11.39□□□□□ -0.59
RFC4-210ENST00000449502 ANGEL1Q9UNK9 670 aaKnown RBP11.39□□□□□ -0.59
RFC4-210ENST00000449502 AKAP11Q9UKA4 1901 aa11.39□□□□□ -0.59
RFC4-210ENST00000449502 A0A1B0GUL6 1792 aa11.39□□□□□ -0.59
RFC4-210ENST00000449502 CASZ1Q86V15 1759 aa11.39□□□□□ -0.59
RFC4-210ENST00000449502 CYP2D7A0A087X1C5 515 aa11.38□□□□□ -0.59
RFC4-210ENST00000449502 KLF18A0A0U1RQI7 1052 aa11.38□□□□□ -0.59
RFC4-210ENST00000449502 VIL1P09327 827 aaKnown RBP11.38□□□□□ -0.59
RFC4-210ENST00000449502 CYP2D6P10635 497 aa11.38□□□□□ -0.59
RFC4-210ENST00000449502 RHBDL3P58872 404 aa11.38□□□□□ -0.59
RFC4-210ENST00000449502 DLGAP5Q15398 846 aa11.38□□□□□ -0.59
RFC4-210ENST00000449502 SLC4A8Q2Y0W8 1093 aa11.38□□□□□ -0.59
RFC4-210ENST00000449502 CFAP100Q494V2 611 aa11.38□□□□□ -0.59
RFC4-210ENST00000449502 C12orf60Q5U649 245 aa11.38□□□□□ -0.59
RFC4-210ENST00000449502 CPLX2Q6PUV4 134 aaKnown RBP11.38□□□□□ -0.59
RFC4-210ENST00000449502 ZNF444Q8N0Y2 327 aaPredicted RBP11.38□□□□□ -0.59
RFC4-210ENST00000449502 FBXL16Q8N461 479 aa11.38□□□□□ -0.59
RFC4-210ENST00000449502 AGBL3Q8NEM8 1001 aa11.38□□□□□ -0.59
RFC4-210ENST00000449502 ZNF274Q96GC6 653 aaPredicted RBP11.38□□□□□ -0.59
RFC4-210ENST00000449502 MTA3Q9BTC8 594 aa11.38□□□□□ -0.59
RFC4-210ENST00000449502 TRIM34Q9BYJ4 488 aa11.38□□□□□ -0.59
RFC4-210ENST00000449502 FHDC1Q9C0D6 1143 aaPredicted RBP11.38□□□□□ -0.59
RFC4-210ENST00000449502 NBPF3Q9H094 633 aa11.38□□□□□ -0.59
RFC4-210ENST00000449502 KIF3AQ9Y496 699 aa11.38□□□□□ -0.59
RFC4-210ENST00000449502 FLT1P17948 1338 aa11.37□□□□□ -0.59
RFC4-210ENST00000449502 LTBP3Q9NS15 1303 aa11.37□□□□□ -0.59
RFC4-210ENST00000449502 SNED1Q8TER0 1413 aa11.37□□□□□ -0.59
RFC4-210ENST00000449502 TSPY2A6NKD2 308 aa11.37□□□□□ -0.59
RFC4-210ENST00000449502 GOLGA8BA8MQT2 603 aa11.37□□□□□ -0.59
RFC4-210ENST00000449502 SH2B2O14492 632 aaPredicted RBP11.37□□□□□ -0.59
RFC4-210ENST00000449502 CPLX1O14810 134 aa11.37□□□□□ -0.59
RFC4-210ENST00000449502 MYO1BO43795 1136 aa11.37□□□□□ -0.59
RFC4-210ENST00000449502 PFKFB2O60825 505 aa11.37□□□□□ -0.59
RFC4-210ENST00000449502 MMP14P50281 582 aa11.37□□□□□ -0.59
RFC4-210ENST00000449502 WTAPQ15007 396 aa11.37□□□□□ -0.59
RFC4-210ENST00000449502 CCDC178Q5BJE1 867 aa11.37□□□□□ -0.59
RFC4-210ENST00000449502 APOBEC3HQ6NTF7 200 aaKnown RBP11.37□□□□□ -0.59
RFC4-210ENST00000449502 CDC42EP5Q6NZY7 148 aa11.37□□□□□ -0.59
RFC4-210ENST00000449502 CYB5R4Q7L1T6 521 aa11.37□□□□□ -0.59
RFC4-210ENST00000449502 FAM184AQ8NB25 1140 aa11.37□□□□□ -0.59
RFC4-210ENST00000449502 INCENPQ9NQS7 918 aa11.37□□□□□ -0.59
RFC4-210ENST00000449502 ZSWIM5Q9P217 1185 aa11.37□□□□□ -0.59
RFC4-210ENST00000449502 SLC12A7Q9Y666 1083 aa11.37□□□□□ -0.59
RFC4-210ENST00000449502 SLX4Q8IY92 1834 aa11.37□□□□□ -0.59
RFC4-210ENST00000449502 LTBP1Q14766 1721 aa11.36□□□□□ -0.59
RFC4-210ENST00000449502 NFKBIEO00221 500 aa11.36□□□□□ -0.59
RFC4-210ENST00000449502 ORC4O43929 436 aa11.36□□□□□ -0.59
RFC4-210ENST00000449502 PRDM1O75626 825 aa11.36□□□□□ -0.59
RFC4-210ENST00000449502 LARGE1O95461 756 aa11.36□□□□□ -0.59
RFC4-210ENST00000449502 PDIA4P13667 645 aaKnown RBP11.36□□□□□ -0.59
RFC4-210ENST00000449502 PDCP20941 246 aa11.36□□□□□ -0.59
RFC4-210ENST00000449502 ANTXR2P58335 489 aa11.36□□□□□ -0.59
RFC4-210ENST00000449502 RASSF7Q02833 373 aa11.36□□□□□ -0.59
RFC4-210ENST00000449502 CXCL9Q07325 125 aa11.36□□□□□ -0.59
RFC4-210ENST00000449502 ZSCAN29Q8IWY8 852 aaPredicted RBP11.36□□□□□ -0.59
RFC4-210ENST00000449502 GTF3C6Q969F1 213 aa11.36□□□□□ -0.59
RFC4-210ENST00000449502 LLPHQ9BRT6 129 aaKnown RBP11.36□□□□□ -0.59
RFC4-210ENST00000449502 AGXT2Q9BYV1 514 aa11.36□□□□□ -0.59
RFC4-210ENST00000449502 GOLGA8AA7E2F4 631 aa11.35□□□□□ -0.59
RFC4-210ENST00000449502 ZBTB43O43298 467 aa11.35□□□□□ -0.59
RFC4-210ENST00000449502 CDKL5O76039 1030 aa11.35□□□□□ -0.59
RFC4-210ENST00000449502 TSPY3P0CV98 308 aa11.35□□□□□ -0.59
RFC4-210ENST00000449502 TSPY8P0CW00 308 aa11.35□□□□□ -0.59
RFC4-210ENST00000449502 RPS12P25398 132 aaKnown RBP11.35□□□□□ -0.59
RFC4-210ENST00000449502 GJB2P29033 226 aa11.35□□□□□ -0.59
RFC4-210ENST00000449502 PDIA3P30101 505 aaKnown RBP11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms