RNA–Protein interactions for RNA: ENST00000445654.2

SHANK2-209, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 3

Gene SHANK2, Length 522 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-209ENST00000445654 FAM109BQ6ICB4 259 aaPredicted RBP17.53■□□□□ 0.4
SHANK2-209ENST00000445654 TCP10Q12799 353 aa17.52■□□□□ 0.4
SHANK2-209ENST00000445654 DIS3LQ8TF46 1054 aaKnown RBP17.52■□□□□ 0.4
SHANK2-209ENST00000445654 PUS3Q9BZE2 481 aaKnown RBP17.52■□□□□ 0.4
SHANK2-209ENST00000445654 AFG3L2Q9Y4W6 797 aa17.52■□□□□ 0.4
SHANK2-209ENST00000445654 GCLCP48506 637 aaPredicted RBP17.51■□□□□ 0.39
SHANK2-209ENST00000445654 PABPC4Q13310 644 aaKnown RBP eCLIP17.51■□□□□ 0.39
SHANK2-209ENST00000445654 NCBP3Q53F19 620 aaKnown RBP17.51■□□□□ 0.39
SHANK2-209ENST00000445654 CDC42EP5Q6NZY7 148 aa17.51■□□□□ 0.39
SHANK2-209ENST00000445654 AGTPBP1Q9UPW5 1226 aa17.51■□□□□ 0.39
SHANK2-209ENST00000445654 LRRFIP2Q9Y608 721 aaKnown RBP17.51■□□□□ 0.39
SHANK2-209ENST00000445654 DOCK2Q92608 1830 aa17.5■□□□□ 0.39
SHANK2-209ENST00000445654 F6X3S4 739 aa17.5■□□□□ 0.39
SHANK2-209ENST00000445654 PTPRAP18433 802 aa17.5■□□□□ 0.39
SHANK2-209ENST00000445654 WWC1Q8IX03 1113 aa17.5■□□□□ 0.39
SHANK2-209ENST00000445654 SRCIN1Q9C0H9 1055 aa17.5■□□□□ 0.39
SHANK2-209ENST00000445654 DAGLAQ9Y4D2 1042 aa17.5■□□□□ 0.39
SHANK2-209ENST00000445654 MYH13Q9UKX3 1938 aa17.5■□□□□ 0.39
SHANK2-209ENST00000445654 DDX60LQ5H9U9 1706 aaKnown RBP17.5■□□□□ 0.39
SHANK2-209ENST00000445654 CTNND1O60716 968 aaKnown RBP17.49■□□□□ 0.39
SHANK2-209ENST00000445654 ENTPD3O75355 529 aa17.49■□□□□ 0.39
SHANK2-209ENST00000445654 SYN1P17600 705 aa17.49■□□□□ 0.39
SHANK2-209ENST00000445654 DDX10Q13206 875 aaKnown RBP17.49■□□□□ 0.39
SHANK2-209ENST00000445654 PUM3Q15397 648 aaKnown RBP17.49■□□□□ 0.39
SHANK2-209ENST00000445654 ANKRD13CQ8N6S4 541 aa17.49■□□□□ 0.39
SHANK2-209ENST00000445654 OGDHLQ9ULD0 1010 aa17.49■□□□□ 0.39
SHANK2-209ENST00000445654 UNC80Q8N2C7 3258 aa17.48■□□□□ 0.39
SHANK2-209ENST00000445654 PHF20L1A8MW92 1017 aa17.48■□□□□ 0.39
SHANK2-209ENST00000445654 VAMP4O75379 141 aa17.48■□□□□ 0.39
SHANK2-209ENST00000445654 TRMT44Q8IYL2 757 aaKnown RBP17.48■□□□□ 0.39
SHANK2-209ENST00000445654 PROCA1Q8NCQ7 364 aaPredicted RBP17.48■□□□□ 0.39
SHANK2-209ENST00000445654 TBC1D2Q9BYX2 928 aa17.48■□□□□ 0.39
SHANK2-209ENST00000445654 USP40Q9NVE5 1235 aa17.48■□□□□ 0.39
SHANK2-209ENST00000445654 FAM198AQ9UFP1 575 aa17.48■□□□□ 0.39
SHANK2-209ENST00000445654 PTPRFP10586 1907 aa17.47■□□□□ 0.39
SHANK2-209ENST00000445654 LDHBP07195 334 aaKnown RBP17.47■□□□□ 0.39
SHANK2-209ENST00000445654 SLC5A1P13866 664 aa17.47■□□□□ 0.39
SHANK2-209ENST00000445654 NFIAQ12857 509 aa17.47■□□□□ 0.39
SHANK2-209ENST00000445654 ZSCAN29Q8IWY8 852 aaPredicted RBP17.47■□□□□ 0.39
SHANK2-209ENST00000445654 VGLL2Q8N8G2 317 aa17.47■□□□□ 0.39
SHANK2-209ENST00000445654 SUCLG2Q96I99 432 aa17.47■□□□□ 0.39
SHANK2-209ENST00000445654 PRKRIP1Q9H875 184 aaPredicted RBP17.47■□□□□ 0.39
SHANK2-209ENST00000445654 SPINK5Q9NQ38 1064 aaPredicted RBP17.47■□□□□ 0.39
SHANK2-209ENST00000445654 DOCK1Q14185 1865 aa17.47■□□□□ 0.39
SHANK2-209ENST00000445654 MAP3K10Q02779 954 aa17.46■□□□□ 0.39
SHANK2-209ENST00000445654 RABL6Q3YEC7 729 aaPredicted RBP17.46■□□□□ 0.39
SHANK2-209ENST00000445654 IDI2Q9BXS1 227 aa17.46■□□□□ 0.39
SHANK2-209ENST00000445654 GNL3LQ9NVN8 582 aaKnown RBP17.46■□□□□ 0.39
SHANK2-209ENST00000445654 FANCIQ9NVI1 1328 aa17.46■□□□□ 0.38
SHANK2-209ENST00000445654 ATRNL1Q5VV63 1379 aa17.45■□□□□ 0.38
SHANK2-209ENST00000445654 TRIM75PA6NK02 468 aa17.45■□□□□ 0.38
SHANK2-209ENST00000445654 POTEB2H3BUK9 544 aa17.45■□□□□ 0.38
SHANK2-209ENST00000445654 LRRC24Q50LG9 513 aa17.45■□□□□ 0.38
SHANK2-209ENST00000445654 SLC4A10Q6U841 1118 aa17.45■□□□□ 0.38
SHANK2-209ENST00000445654 SLF2Q8IX21 1173 aa17.45■□□□□ 0.38
SHANK2-209ENST00000445654 ZGPATQ8N5A5 531 aaKnown RBP17.45■□□□□ 0.38
SHANK2-209ENST00000445654 SYMPKQ92797 1274 aaKnown RBP17.45■□□□□ 0.38
SHANK2-209ENST00000445654 LBHD1Q9BQE6 289 aaPredicted RBP17.45■□□□□ 0.38
SHANK2-209ENST00000445654 PRDM6Q9NQX0 595 aa17.45■□□□□ 0.38
SHANK2-209ENST00000445654 UTYO14607 1347 aa17.45■□□□□ 0.38
SHANK2-209ENST00000445654 FGFR2P21802 821 aa17.44■□□□□ 0.38
SHANK2-209ENST00000445654 RGS3P49796 1198 aa17.44■□□□□ 0.38
SHANK2-209ENST00000445654 DIXDC1Q155Q3 683 aa17.44■□□□□ 0.38
SHANK2-209ENST00000445654 ZNF697Q5TEC3 545 aa17.44■□□□□ 0.38
SHANK2-209ENST00000445654 LPIN2Q92539 896 aa17.44■□□□□ 0.38
SHANK2-209ENST00000445654 SALL1Q9NSC2 1324 aa17.44■□□□□ 0.38
SHANK2-209ENST00000445654 SEMA3EO15041 775 aa17.43■□□□□ 0.38
SHANK2-209ENST00000445654 SOCS4Q8WXH5 440 aa17.43■□□□□ 0.38
SHANK2-209ENST00000445654 BICC1Q9H694 974 aaKnown RBP17.43■□□□□ 0.38
SHANK2-209ENST00000445654 GJD2Q9UKL4 321 aa17.43■□□□□ 0.38
SHANK2-209ENST00000445654 DOCK3Q8IZD9 2030 aa17.43■□□□□ 0.38
SHANK2-209ENST00000445654 PHIPQ8WWQ0 1821 aa17.42■□□□□ 0.38
SHANK2-209ENST00000445654 XRCC5P13010 732 aaKnown RBP17.42■□□□□ 0.38
SHANK2-209ENST00000445654 MAP3K21Q5TCX8 1036 aa17.42■□□□□ 0.38
SHANK2-209ENST00000445654 WDR63Q8IWG1 891 aa17.42■□□□□ 0.38
SHANK2-209ENST00000445654 KAZALD1Q96I82 304 aa17.42■□□□□ 0.38
SHANK2-209ENST00000445654 GUCD1Q96NT3 240 aa17.42■□□□□ 0.38
SHANK2-209ENST00000445654 COL2A1P02458 1487 aaPredicted RBP17.42■□□□□ 0.38
SHANK2-209ENST00000445654 TBC1D12O60347 775 aa17.41■□□□□ 0.38
SHANK2-209ENST00000445654 COL6A1P12109 1028 aa17.41■□□□□ 0.38
SHANK2-209ENST00000445654 PRDX5P30044 214 aa17.41■□□□□ 0.38
SHANK2-209ENST00000445654 EXOSC9Q06265 439 aaKnown RBP17.41■□□□□ 0.38
SHANK2-209ENST00000445654 NUDT12Q9BQG2 462 aa17.41■□□□□ 0.38
SHANK2-209ENST00000445654 OSBPL5Q9H0X9 879 aaPredicted RBP17.41■□□□□ 0.38
SHANK2-209ENST00000445654 MORF4L1Q9UBU8 362 aa17.41■□□□□ 0.38
SHANK2-209ENST00000445654 DENND2AQ9ULE3 1009 aa17.41■□□□□ 0.38
SHANK2-209ENST00000445654 PFASO15067 1338 aa17.41■□□□□ 0.38
SHANK2-209ENST00000445654 LOC285556D6RIA3 1793 aa17.4■□□□□ 0.38
SHANK2-209ENST00000445654 NBPF7P0C2Y1 421 aaPredicted RBP17.4■□□□□ 0.38
SHANK2-209ENST00000445654 PRKAR2AP13861 404 aaKnown RBP17.4■□□□□ 0.38
SHANK2-209ENST00000445654 MDM2Q00987 491 aaPredicted RBP17.4■□□□□ 0.38
SHANK2-209ENST00000445654 PDE3AQ14432 1141 aa17.4■□□□□ 0.38
SHANK2-209ENST00000445654 TREML2Q5T2D2 321 aa17.4■□□□□ 0.38
SHANK2-209ENST00000445654 ZFPM1Q8IX07 1006 aa17.4■□□□□ 0.38
SHANK2-209ENST00000445654 TRIB2Q92519 343 aa17.4■□□□□ 0.38
SHANK2-209ENST00000445654 PRKAG2Q9UGJ0 569 aa17.4■□□□□ 0.38
SHANK2-209ENST00000445654 ZBTB22O15209 634 aa17.39■□□□□ 0.37
SHANK2-209ENST00000445654 ZKSCAN1P17029 563 aaPredicted RBP17.39■□□□□ 0.37
SHANK2-209ENST00000445654 ZNF280CQ8ND82 737 aa17.39■□□□□ 0.37
SHANK2-209ENST00000445654 AS3MTQ9HBK9 375 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms