RNA–Protein interactions for RNA: ENST00000443503.6

CTDSPL-206, Transcript of CTD small phosphatase like, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CTDSPL, Length 4,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-206ENST00000443503 GGA1Q9UJY5 639 aa25.36■■□□□ 1.65
CTDSPL-206ENST00000443503 LUC7L2Q9Y383 392 aaKnown RBP25.36■■□□□ 1.65
CTDSPL-206ENST00000443503 PTCH1Q13635 1447 aa25.36■■□□□ 1.65
CTDSPL-206ENST00000443503 TTC38Q5R3I4 469 aa25.36■■□□□ 1.65
CTDSPL-206ENST00000443503 ARHGAP30Q7Z6I6 1101 aaPredicted RBP25.36■■□□□ 1.65
CTDSPL-206ENST00000443503 RBM17Q96I25 401 aaKnown RBP25.36■■□□□ 1.65
CTDSPL-206ENST00000443503 PFKFB2O60825 505 aa25.35■■□□□ 1.65
CTDSPL-206ENST00000443503 FANCCQ00597 558 aa25.35■■□□□ 1.65
CTDSPL-206ENST00000443503 IFFO1Q0D2I5 559 aa25.35■■□□□ 1.65
CTDSPL-206ENST00000443503 ZNF589Q86UQ0 364 aaPredicted RBP25.35■■□□□ 1.65
CTDSPL-206ENST00000443503 BICDL2A1A5D9 508 aa25.35■■□□□ 1.65
CTDSPL-206ENST00000443503 GYG1P46976 350 aa25.35■■□□□ 1.65
CTDSPL-206ENST00000443503 BCAMP50895 628 aa25.35■■□□□ 1.65
CTDSPL-206ENST00000443503 CTNNBL1Q8WYA6 563 aaPredicted RBP25.35■■□□□ 1.65
CTDSPL-206ENST00000443503 USP17L12C9JPN9 530 aa25.35■■□□□ 1.65
CTDSPL-206ENST00000443503 USP17L21D6R901 530 aa25.35■■□□□ 1.65
CTDSPL-206ENST00000443503 VPS54Q9P1Q0 977 aa25.35■■□□□ 1.65
CTDSPL-206ENST00000443503 CYP21A2P08686 494 aa25.35■■□□□ 1.65
CTDSPL-206ENST00000443503 GUCA1BQ9UMX6 200 aa25.35■■□□□ 1.65
CTDSPL-206ENST00000443503 TUBB4AP04350 444 aa25.34■■□□□ 1.65
CTDSPL-206ENST00000443503 GOPCQ9HD26 462 aa25.34■■□□□ 1.65
CTDSPL-206ENST00000443503 UNC13BO14795 1591 aa25.34■■□□□ 1.65
CTDSPL-206ENST00000443503 MAP3K15Q6ZN16 1313 aa25.34■■□□□ 1.65
CTDSPL-206ENST00000443503 KIF5AQ12840 1032 aa25.34■■□□□ 1.65
CTDSPL-206ENST00000443503 BAG1Q99933 345 aaPredicted RBP25.34■■□□□ 1.65
CTDSPL-206ENST00000443503 ZBTB1Q9Y2K1 713 aa25.34■■□□□ 1.65
CTDSPL-206ENST00000443503 NR1I2O75469 434 aa25.34■■□□□ 1.65
CTDSPL-206ENST00000443503 PHKA1P46020 1223 aa25.34■■□□□ 1.65
CTDSPL-206ENST00000443503 GIGYF2Q6Y7W6 1299 aaKnown RBP25.34■■□□□ 1.65
CTDSPL-206ENST00000443503 IFNL3Q8IZI9 196 aa25.34■■□□□ 1.65
CTDSPL-206ENST00000443503 A2ML1A8K2U0 1454 aa25.34■■□□□ 1.65
CTDSPL-206ENST00000443503 GSTTP1A0A1W2PQM5 241 aa25.33■■□□□ 1.65
CTDSPL-206ENST00000443503 ARAP3Q8WWN8 1544 aa25.33■■□□□ 1.65
CTDSPL-206ENST00000443503 MCM6Q14566 821 aa25.33■■□□□ 1.65
CTDSPL-206ENST00000443503 ZNF654Q8IZM8 581 aa25.33■■□□□ 1.65
CTDSPL-206ENST00000443503 CARD10Q9BWT7 1032 aa25.33■■□□□ 1.65
CTDSPL-206ENST00000443503 SRRTQ9BXP5 876 aaKnown RBP25.33■■□□□ 1.65
CTDSPL-206ENST00000443503 NPHP4O75161 1426 aaPredicted RBP25.33■■□□□ 1.65
CTDSPL-206ENST00000443503 RNF17Q9BXT8 1623 aaKnown RBP25.33■■□□□ 1.65
CTDSPL-206ENST00000443503 CTAGE9A4FU28 777 aa25.33■■□□□ 1.65
CTDSPL-206ENST00000443503 ANKRD62A6NC57 917 aa25.33■■□□□ 1.65
CTDSPL-206ENST00000443503 MAPKAPK5Q8IW41 473 aa25.33■■□□□ 1.65
CTDSPL-206ENST00000443503 CMTR1Q8N1G2 835 aaKnown RBP25.33■■□□□ 1.65
CTDSPL-206ENST00000443503 VPS16Q9H269 839 aa25.33■■□□□ 1.65
CTDSPL-206ENST00000443503 PDE8BO95263 885 aa25.33■■□□□ 1.64
CTDSPL-206ENST00000443503 GTF2F1P35269 517 aaKnown RBP eCLIP25.33■■□□□ 1.648e-7■□□□□ 10.3
CTDSPL-206ENST00000443503 NFE2L3Q9Y4A8 694 aa25.33■■□□□ 1.64
CTDSPL-206ENST00000443503 KRT86O43790 486 aa25.32■■□□□ 1.64
CTDSPL-206ENST00000443503 DESP17661 470 aa25.32■■□□□ 1.64
CTDSPL-206ENST00000443503 MRPL12P52815 198 aaKnown RBP25.32■■□□□ 1.64
CTDSPL-206ENST00000443503 PPP2R5BQ15173 497 aa25.32■■□□□ 1.64
CTDSPL-206ENST00000443503 FAM47AQ5JRC9 791 aa25.32■■□□□ 1.64
CTDSPL-206ENST00000443503 TFAP4Q01664 338 aa25.32■■□□□ 1.64
CTDSPL-206ENST00000443503 PPARAQ07869 468 aa25.32■■□□□ 1.64
CTDSPL-206ENST00000443503 CCDC174Q6PII3 467 aa25.32■■□□□ 1.64
CTDSPL-206ENST00000443503 KRT222Q8N1A0 295 aa25.32■■□□□ 1.64
CTDSPL-206ENST00000443503 SDR42E1Q8WUS8 393 aa25.32■■□□□ 1.64
CTDSPL-206ENST00000443503 STAMQ92783 540 aa25.32■■□□□ 1.64
CTDSPL-206ENST00000443503 KRT83P78385 493 aa25.32■■□□□ 1.64
CTDSPL-206ENST00000443503 ZNF569Q5MCW4 686 aa25.32■■□□□ 1.64
CTDSPL-206ENST00000443503 BCCIPQ9P287 314 aaKnown RBP eCLIP25.32■■□□□ 1.64
CTDSPL-206ENST00000443503 TACC1O75410 805 aa25.31■■□□□ 1.64
CTDSPL-206ENST00000443503 CNGA4Q8IV77 575 aa25.31■■□□□ 1.64
CTDSPL-206ENST00000443503 CTR9Q6PD62 1173 aa25.31■■□□□ 1.64
CTDSPL-206ENST00000443503 AKR1B15C9JRZ8 316 aaPredicted RBP25.31■■□□□ 1.64
CTDSPL-206ENST00000443503 SASH1O94885 1247 aa25.31■■□□□ 1.64
CTDSPL-206ENST00000443503 PLCD1P51178 756 aa25.31■■□□□ 1.64
CTDSPL-206ENST00000443503 CKAP4Q07065 602 aaKnown RBP25.31■■□□□ 1.64
CTDSPL-206ENST00000443503 CPSF1Q10570 1443 aaKnown RBP25.31■■□□□ 1.64
CTDSPL-206ENST00000443503 ADALQ6DHV7 355 aa25.31■■□□□ 1.64
CTDSPL-206ENST00000443503 IGSF22Q8N9C0 903 aa25.31■■□□□ 1.64
CTDSPL-206ENST00000443503 MLKLQ8NB16 471 aa25.3■■□□□ 1.64
CTDSPL-206ENST00000443503 CTNND2Q9UQB3 1225 aa25.3■■□□□ 1.64
CTDSPL-206ENST00000443503 PTPN12Q05209 780 aaKnown RBP25.3■■□□□ 1.64
CTDSPL-206ENST00000443503 CUL4AQ13619 759 aa25.3■■□□□ 1.64
CTDSPL-206ENST00000443503 NLRP12P59046 1061 aa25.3■■□□□ 1.64
CTDSPL-206ENST00000443503 SHTN1A0MZ66 631 aa25.3■■□□□ 1.64
CTDSPL-206ENST00000443503 ZMYM1Q5SVZ6 1142 aa25.3■■□□□ 1.64
CTDSPL-206ENST00000443503 RBM26Q5T8P6 1007 aaKnown RBP25.3■■□□□ 1.64
CTDSPL-206ENST00000443503 BICD1Q96G01 975 aa25.29■■□□□ 1.64
CTDSPL-206ENST00000443503 ADCY9O60503 1353 aa25.29■■□□□ 1.64
CTDSPL-206ENST00000443503 PDIA3P30101 505 aaKnown RBP25.29■■□□□ 1.64
CTDSPL-206ENST00000443503 SV2BQ7L1I2 683 aa25.29■■□□□ 1.64
CTDSPL-206ENST00000443503 DYDC1Q8WWB3 177 aa25.29■■□□□ 1.64
CTDSPL-206ENST00000443503 WDR17Q8IZU2 1322 aa25.29■■□□□ 1.64
CTDSPL-206ENST00000443503 PDE4DQ08499 809 aa25.29■■□□□ 1.64
CTDSPL-206ENST00000443503 SCRN1Q12765 414 aa25.29■■□□□ 1.64
CTDSPL-206ENST00000443503 POLA2Q14181 598 aa25.29■■□□□ 1.64
CTDSPL-206ENST00000443503 TGFBRAP1Q8WUH2 860 aa25.29■■□□□ 1.64
CTDSPL-206ENST00000443503 LOC102724428A0A0B4J2F2 783 aa25.29■■□□□ 1.64
CTDSPL-206ENST00000443503 TXKP42681 527 aa25.29■■□□□ 1.64
CTDSPL-206ENST00000443503 SIK1P57059 783 aa25.29■■□□□ 1.64
CTDSPL-206ENST00000443503 NEK11Q8NG66 645 aa25.29■■□□□ 1.64
CTDSPL-206ENST00000443503 PUF60Q9UHX1 559 aaKnown RBP25.29■■□□□ 1.64
CTDSPL-206ENST00000443503 KRT13P13646 458 aa25.28■■□□□ 1.64
CTDSPL-206ENST00000443503 TBC1D8BQ0IIM8 1120 aa25.28■■□□□ 1.64
CTDSPL-206ENST00000443503 GPR108Q9NPR9 543 aa25.28■■□□□ 1.64
CTDSPL-206ENST00000443503 LMAN1P49257 510 aa25.28■■□□□ 1.64
CTDSPL-206ENST00000443503 IFI16Q16666 785 aaKnown RBP25.28■■□□□ 1.64
CTDSPL-206ENST00000443503 HS2ST1Q7LGA3 356 aa25.28■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms