RNA–Protein interactions for RNA: ENST00000441998.5

NELFE-205, Transcript of negative elongation factor complex member E, humanhuman

APPRIS ALT2 TSL 5

Gene NELFE, Length 1,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-205ENST00000441998 RFX7Q2KHR2 1363 aa13.67□□□□□ -0.22
NELFE-205ENST00000441998 CXCL11O14625 94 aa13.66□□□□□ -0.22
NELFE-205ENST00000441998 IRF6O14896 467 aa13.66□□□□□ -0.22
NELFE-205ENST00000441998 RHBDL3P58872 404 aa13.66□□□□□ -0.22
NELFE-205ENST00000441998 MIGA2Q7L4E1 593 aa13.66□□□□□ -0.22
NELFE-205ENST00000441998 ZNF384Q8TF68 577 aa13.66□□□□□ -0.22
NELFE-205ENST00000441998 OTUD5Q96G74 571 aa13.66□□□□□ -0.22
NELFE-205ENST00000441998 R3HDMLQ9H3Y0 253 aa13.66□□□□□ -0.22
NELFE-205ENST00000441998 C1orf115Q9H7X2 142 aa13.66□□□□□ -0.22
NELFE-205ENST00000441998 RAI14Q9P0K7 980 aa13.66□□□□□ -0.22
NELFE-205ENST00000441998 ATRNL1Q5VV63 1379 aa13.66□□□□□ -0.22
NELFE-205ENST00000441998 AKAP11Q9UKA4 1901 aa13.65□□□□□ -0.22
NELFE-205ENST00000441998 CTNND1O60716 968 aaKnown RBP13.65□□□□□ -0.22
NELFE-205ENST00000441998 SP3Q02447 781 aa13.65□□□□□ -0.22
NELFE-205ENST00000441998 CRHR2Q13324 411 aa13.65□□□□□ -0.22
NELFE-205ENST00000441998 EAF2Q96CJ1 260 aaPredicted RBP13.65□□□□□ -0.22
NELFE-205ENST00000441998 DBNDD2Q9BQY9 259 aa13.65□□□□□ -0.22
NELFE-205ENST00000441998 NOL10Q9BSC4 688 aaKnown RBP13.65□□□□□ -0.22
NELFE-205ENST00000441998 DBNLQ9UJU6 430 aaKnown RBP13.65□□□□□ -0.22
NELFE-205ENST00000441998 COL2A1P02458 1487 aaPredicted RBP13.64□□□□□ -0.23
NELFE-205ENST00000441998 PHF20L1A8MW92 1017 aa13.64□□□□□ -0.23
NELFE-205ENST00000441998 RAB11FIP3O75154 756 aa13.64□□□□□ -0.23
NELFE-205ENST00000441998 INPP5BP32019 993 aa13.64□□□□□ -0.23
NELFE-205ENST00000441998 NAA16Q6N069 864 aaPredicted RBP13.64□□□□□ -0.23
NELFE-205ENST00000441998 PI16Q6UXB8 463 aa13.64□□□□□ -0.23
NELFE-205ENST00000441998 TBC1D9Q6ZT07 1266 aa13.64□□□□□ -0.23
NELFE-205ENST00000441998 ANKRD23Q86SG2 305 aa13.64□□□□□ -0.23
NELFE-205ENST00000441998 ZFPM1Q8IX07 1006 aa13.64□□□□□ -0.23
NELFE-205ENST00000441998 CNKSR2Q8WXI2 1034 aa13.64□□□□□ -0.23
NELFE-205ENST00000441998 TBC1D2Q9BYX2 928 aa13.64□□□□□ -0.23
NELFE-205ENST00000441998 DHX36Q9H2U1 1008 aaKnown RBP13.64□□□□□ -0.23
NELFE-205ENST00000441998 HPS5Q9UPZ3 1129 aa13.64□□□□□ -0.23
NELFE-205ENST00000441998 CASP8AP2Q9UKL3 1982 aa13.63□□□□□ -0.23
NELFE-205ENST00000441998 TLR2O60603 784 aa13.63□□□□□ -0.23
NELFE-205ENST00000441998 GNRH1P01148 92 aa13.63□□□□□ -0.23
NELFE-205ENST00000441998 CYP2E1P05181 493 aaPredicted RBP13.63□□□□□ -0.23
NELFE-205ENST00000441998 TAF1CQ15572 869 aaPredicted RBP13.63□□□□□ -0.23
NELFE-205ENST00000441998 SH3BP5LQ7L8J4 393 aa13.63□□□□□ -0.23
NELFE-205ENST00000441998 ZSCAN29Q8IWY8 852 aaPredicted RBP13.63□□□□□ -0.23
NELFE-205ENST00000441998 SCYL3Q8IZE3 742 aa13.63□□□□□ -0.23
NELFE-205ENST00000441998 RHPN1Q8TCX5 695 aa13.63□□□□□ -0.23
NELFE-205ENST00000441998 KIF1BPQ96EK5 621 aa13.63□□□□□ -0.23
NELFE-205ENST00000441998 PICK1Q9NRD5 415 aa13.63□□□□□ -0.23
NELFE-205ENST00000441998 DDTLA6NHG4 134 aaPredicted RBP13.62□□□□□ -0.23
NELFE-205ENST00000441998 BTBD19C9JJ37 291 aa13.62□□□□□ -0.23
NELFE-205ENST00000441998 MLLT1Q03111 559 aaPredicted RBP13.62□□□□□ -0.23
NELFE-205ENST00000441998 FASTKD5Q7L8L6 764 aaKnown RBP13.62□□□□□ -0.23
NELFE-205ENST00000441998 OTOP1Q7RTM1 612 aa13.62□□□□□ -0.23
NELFE-205ENST00000441998 CLASRPQ8N2M8 674 aaKnown RBP13.62□□□□□ -0.23
NELFE-205ENST00000441998 FAM43AQ8N2R8 423 aa13.62□□□□□ -0.23
NELFE-205ENST00000441998 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.62□□□□□ -0.23
NELFE-205ENST00000441998 OSBPL5Q9H0X9 879 aaPredicted RBP13.62□□□□□ -0.23
NELFE-205ENST00000441998 DDX4Q9NQI0 724 aaKnown RBP13.62□□□□□ -0.23
NELFE-205ENST00000441998 GINM1Q9NU53 330 aa13.62□□□□□ -0.23
NELFE-205ENST00000441998 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.62□□□□□ -0.23
NELFE-205ENST00000441998 PI4KBQ9UBF8 816 aa13.62□□□□□ -0.23
NELFE-205ENST00000441998 HERC5Q9UII4 1024 aaKnown RBP13.62□□□□□ -0.23
NELFE-205ENST00000441998 SLC45A1Q9Y2W3 748 aa13.62□□□□□ -0.23
NELFE-205ENST00000441998 PTPRAP18433 802 aa13.61□□□□□ -0.23
NELFE-205ENST00000441998 TTF1Q15361 905 aaPredicted RBP13.61□□□□□ -0.23
NELFE-205ENST00000441998 METTL16Q86W50 562 aaKnown RBP13.61□□□□□ -0.23
NELFE-205ENST00000441998 FOXP4Q8IVH2 680 aaPredicted RBP13.61□□□□□ -0.23
NELFE-205ENST00000441998 TEX11Q8IYF3 940 aa13.61□□□□□ -0.23
NELFE-205ENST00000441998 CCDC8Q9H0W5 538 aaPredicted RBP13.61□□□□□ -0.23
NELFE-205ENST00000441998 EFCC1Q9HA90 598 aa13.61□□□□□ -0.23
NELFE-205ENST00000441998 EXOC6BQ9Y2D4 811 aa13.61□□□□□ -0.23
NELFE-205ENST00000441998 COG6Q9Y2V7 657 aa13.61□□□□□ -0.23
NELFE-205ENST00000441998 ZAP70P43403 619 aa13.6□□□□□ -0.23
NELFE-205ENST00000441998 PRMT2P55345 433 aa13.6□□□□□ -0.23
NELFE-205ENST00000441998 MAP3K12Q12852 859 aa13.6□□□□□ -0.23
NELFE-205ENST00000441998 PICALMQ13492 652 aa13.6□□□□□ -0.23
NELFE-205ENST00000441998 AACSQ86V21 672 aa13.6□□□□□ -0.23
NELFE-205ENST00000441998 SNRKQ9NRH2 765 aa13.6□□□□□ -0.23
NELFE-205ENST00000441998 PTPN22Q9Y2R2 807 aa13.6□□□□□ -0.23
NELFE-205ENST00000441998 AFG3L2Q9Y4W6 797 aa13.6□□□□□ -0.23
NELFE-205ENST00000441998 TRIM17Q9Y577 477 aa13.6□□□□□ -0.23
NELFE-205ENST00000441998 ZHX2Q9Y6X8 837 aa13.6□□□□□ -0.23
NELFE-205ENST00000441998 LAMB1P07942 1786 aa13.59□□□□□ -0.23
NELFE-205ENST00000441998 A0A0G2JLL6 359 aaPredicted RBP13.59□□□□□ -0.23
NELFE-205ENST00000441998 MOGSQ13724 837 aa13.59□□□□□ -0.23
NELFE-205ENST00000441998 KIF22Q14807 665 aa13.59□□□□□ -0.23
NELFE-205ENST00000441998 C17orf99Q6UX52 265 aa13.59□□□□□ -0.23
NELFE-205ENST00000441998 PRRT2Q7Z6L0 340 aaPredicted RBP13.59□□□□□ -0.23
NELFE-205ENST00000441998 SIRT2Q8IXJ6 389 aa13.59□□□□□ -0.23
NELFE-205ENST00000441998 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.59□□□□□ -0.23
NELFE-205ENST00000441998 TAOK2Q9UL54 1235 aa13.59□□□□□ -0.23
NELFE-205ENST00000441998 PDHXO00330 501 aa13.58□□□□□ -0.24
NELFE-205ENST00000441998 CD99L2Q8TCZ2 262 aa13.58□□□□□ -0.24
NELFE-205ENST00000441998 SH3RF3Q8TEJ3 882 aaPredicted RBP13.58□□□□□ -0.24
NELFE-205ENST00000441998 PARK7Q99497 189 aaKnown RBP13.58□□□□□ -0.24
NELFE-205ENST00000441998 PIH1D3Q9NQM4 214 aaKnown RBP13.58□□□□□ -0.24
NELFE-205ENST00000441998 AATFQ9NY61 560 aaKnown RBP eCLIP13.58□□□□□ -0.24
NELFE-205ENST00000441998 TLR7Q9NYK1 1049 aaKnown RBP13.58□□□□□ -0.24
NELFE-205ENST00000441998 IFIT2P09913 472 aaKnown RBP13.57□□□□□ -0.24
NELFE-205ENST00000441998 CYP7A1P22680 504 aa13.57□□□□□ -0.24
NELFE-205ENST00000441998 CAP2P40123 477 aa13.57□□□□□ -0.24
NELFE-205ENST00000441998 LACTBP83111 547 aaPredicted RBP13.57□□□□□ -0.24
NELFE-205ENST00000441998 ARMC5Q96C12 935 aa13.57□□□□□ -0.24
NELFE-205ENST00000441998 IDH1O75874 414 aaKnown RBP13.56□□□□□ -0.24
NELFE-205ENST00000441998 HOXD10P28358 340 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms