RNA–Protein interactions for RNA: ENST00000441310.6

PMS1-213, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMS1, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-213ENST00000441310 ANKZF1Q9H8Y5 726 aa19.21■□□□□ 0.67
PMS1-213ENST00000441310 RHOXF2BP0C7M4 288 aa19.21■□□□□ 0.67
PMS1-213ENST00000441310 SF3A1Q15459 793 aaKnown RBP19.21■□□□□ 0.67
PMS1-213ENST00000441310 KIFC2Q96AC6 838 aa19.21■□□□□ 0.67
PMS1-213ENST00000441310 RHOXF2Q9BQY4 288 aa19.21■□□□□ 0.67
PMS1-213ENST00000441310 ARHGAP6O43182 974 aa19.21■□□□□ 0.67
PMS1-213ENST00000441310 WDHD1O75717 1129 aaPredicted RBP19.21■□□□□ 0.67
PMS1-213ENST00000441310 LIG3P49916 1009 aa19.21■□□□□ 0.67
PMS1-213ENST00000441310 SCRN1Q12765 414 aa19.2■□□□□ 0.66
PMS1-213ENST00000441310 HLFQ16534 295 aa19.2■□□□□ 0.66
PMS1-213ENST00000441310 ATG9AQ7Z3C6 839 aa19.2■□□□□ 0.66
PMS1-213ENST00000441310 AFDNP55196 1824 aaKnown RBP19.2■□□□□ 0.66
PMS1-213ENST00000441310 GOLIM4O00461 696 aa19.2■□□□□ 0.66
PMS1-213ENST00000441310 SWT1Q5T5J6 900 aaKnown RBP19.2■□□□□ 0.66
PMS1-213ENST00000441310 ZNF622Q969S3 477 aaKnown RBP eCLIP19.2■□□□□ 0.66
PMS1-213ENST00000441310 ACSBG1Q96GR2 724 aa19.2■□□□□ 0.66
PMS1-213ENST00000441310 ERLIN1O75477 346 aa19.19■□□□□ 0.66
PMS1-213ENST00000441310 NLRP12P59046 1061 aa19.19■□□□□ 0.66
PMS1-213ENST00000441310 DNAJC21Q5F1R6 531 aaKnown RBP19.19■□□□□ 0.66
PMS1-213ENST00000441310 FAM212AQ96EL1 285 aa19.19■□□□□ 0.66
PMS1-213ENST00000441310 SLC4A9Q96Q91 983 aa19.19■□□□□ 0.66
PMS1-213ENST00000441310 BPIFA3Q9BQP9 254 aa19.19■□□□□ 0.66
PMS1-213ENST00000441310 SNRKQ9NRH2 765 aa19.19■□□□□ 0.66
PMS1-213ENST00000441310 SUFUQ9UMX1 484 aa19.19■□□□□ 0.66
PMS1-213ENST00000441310 TBC1D2BQ9UPU7 963 aa19.19■□□□□ 0.66
PMS1-213ENST00000441310 EXOC5O00471 708 aa19.19■□□□□ 0.66
PMS1-213ENST00000441310 DHX37Q8IY37 1157 aaKnown RBP19.19■□□□□ 0.66
PMS1-213ENST00000441310 BAG1Q99933 345 aaPredicted RBP19.19■□□□□ 0.66
PMS1-213ENST00000441310 KCNG1Q9UIX4 513 aa19.19■□□□□ 0.66
PMS1-213ENST00000441310 L1RE1Q9UN81 338 aa19.19■□□□□ 0.66
PMS1-213ENST00000441310 A0A087WUV0 522 aaPredicted RBP19.19■□□□□ 0.66
PMS1-213ENST00000441310 PPFIA4O75335 1185 aa19.19■□□□□ 0.66
PMS1-213ENST00000441310 ATP5JP18859 108 aa19.19■□□□□ 0.66
PMS1-213ENST00000441310 GSCP56915 257 aaPredicted RBP19.19■□□□□ 0.66
PMS1-213ENST00000441310 TCIRG1Q13488 830 aa19.18■□□□□ 0.66
PMS1-213ENST00000441310 CASP8Q14790 479 aa19.18■□□□□ 0.66
PMS1-213ENST00000441310 KIF6Q6ZMV9 814 aa19.18■□□□□ 0.66
PMS1-213ENST00000441310 SRGAP1Q7Z6B7 1085 aa19.18■□□□□ 0.66
PMS1-213ENST00000441310 TMEM139Q8IV31 216 aa19.18■□□□□ 0.66
PMS1-213ENST00000441310 KAT2BQ92831 832 aa19.18■□□□□ 0.66
PMS1-213ENST00000441310 STARD3NLO95772 234 aa19.18■□□□□ 0.66
PMS1-213ENST00000441310 CPP00450 1065 aa19.18■□□□□ 0.66
PMS1-213ENST00000441310 TFRCP02786 760 aaKnown RBP19.18■□□□□ 0.66
PMS1-213ENST00000441310 ATP6V1AP38606 617 aa19.18■□□□□ 0.66
PMS1-213ENST00000441310 CCT2P78371 535 aaKnown RBP19.18■□□□□ 0.66
PMS1-213ENST00000441310 FCHSD1Q86WN1 690 aa19.18■□□□□ 0.66
PMS1-213ENST00000441310 DONSONQ9NYP3 566 aa19.18■□□□□ 0.66
PMS1-213ENST00000441310 KCPQ6ZWJ8 1503 aa19.18■□□□□ 0.66
PMS1-213ENST00000441310 ADKP55263 362 aaKnown RBP19.17■□□□□ 0.66
PMS1-213ENST00000441310 VSTM4Q8IW00 320 aa19.17■□□□□ 0.66
PMS1-213ENST00000441310 CEP89Q96ST8 783 aa19.17■□□□□ 0.66
PMS1-213ENST00000441310 HSD3B7Q9H2F3 369 aa19.17■□□□□ 0.66
PMS1-213ENST00000441310 ARFGEF2Q9Y6D5 1785 aa19.17■□□□□ 0.66
PMS1-213ENST00000441310 ABCC6O95255 1503 aa19.17■□□□□ 0.66
PMS1-213ENST00000441310 CUTAO60888 179 aa19.17■□□□□ 0.66
PMS1-213ENST00000441310 ERLIN2O94905 339 aa19.17■□□□□ 0.66
PMS1-213ENST00000441310 PIP4K2BP78356 416 aa19.17■□□□□ 0.66
PMS1-213ENST00000441310 FAM71BQ8TC56 605 aa19.17■□□□□ 0.66
PMS1-213ENST00000441310 HNRNPLLQ8WVV9 542 aaKnown RBP19.17■□□□□ 0.66
PMS1-213ENST00000441310 LZTFL1Q9NQ48 299 aa19.17■□□□□ 0.66
PMS1-213ENST00000441310 ZBTB1Q9Y2K1 713 aa19.17■□□□□ 0.66
PMS1-213ENST00000441310 CBFA2T2O43439 604 aa19.17■□□□□ 0.66
PMS1-213ENST00000441310 STK38Q15208 465 aa19.17■□□□□ 0.66
PMS1-213ENST00000441310 CCDC57Q2TAC2 916 aa19.17■□□□□ 0.66
PMS1-213ENST00000441310 NEK1Q96PY6 1258 aa19.17■□□□□ 0.66
PMS1-213ENST00000441310 GLI3P10071 1580 aa19.16■□□□□ 0.66
PMS1-213ENST00000441310 PTPDC1A2A3K4 754 aa19.16■□□□□ 0.66
PMS1-213ENST00000441310 HIP1O00291 1037 aa19.16■□□□□ 0.66
PMS1-213ENST00000441310 FBXW10Q5XX13 1052 aa19.16■□□□□ 0.66
PMS1-213ENST00000441310 GOLGA6L9A6NEM1 432 aa19.16■□□□□ 0.66
PMS1-213ENST00000441310 EYA2O00167 538 aa19.16■□□□□ 0.66
PMS1-213ENST00000441310 VSNL1P62760 191 aa19.16■□□□□ 0.66
PMS1-213ENST00000441310 ALDH8A1Q9H2A2 487 aaPredicted RBP19.16■□□□□ 0.66
PMS1-213ENST00000441310 PARP4Q9UKK3 1724 aaKnown RBP19.16■□□□□ 0.66
PMS1-213ENST00000441310 NAA16Q6N069 864 aaPredicted RBP19.15■□□□□ 0.66
PMS1-213ENST00000441310 FKBP4Q02790 459 aaKnown RBP eCLIP19.15■□□□□ 0.66
PMS1-213ENST00000441310 ADALQ6DHV7 355 aa19.15■□□□□ 0.66
PMS1-213ENST00000441310 ILDR1Q86SU0 546 aaPredicted RBP19.15■□□□□ 0.66
PMS1-213ENST00000441310 NSUN7Q8NE18 718 aaKnown RBP19.15■□□□□ 0.66
PMS1-213ENST00000441310 CLIC6Q96NY7 704 aa19.15■□□□□ 0.66
PMS1-213ENST00000441310 ISCA1Q9BUE6 129 aa19.15■□□□□ 0.66
PMS1-213ENST00000441310 RABEP2Q9H5N1 569 aa19.15■□□□□ 0.66
PMS1-213ENST00000441310 MRPL44Q9H9J2 332 aaKnown RBP19.15■□□□□ 0.66
PMS1-213ENST00000441310 NCOA5Q9HCD5 579 aaKnown RBP19.15■□□□□ 0.66
PMS1-213ENST00000441310 TAF5LO75529 589 aa19.14■□□□□ 0.66
PMS1-213ENST00000441310 MTF1Q14872 753 aa19.14■□□□□ 0.66
PMS1-213ENST00000441310 LRRIQ3A6PVS8 624 aaPredicted RBP19.14■□□□□ 0.65
PMS1-213ENST00000441310 RNF40O75150 1001 aa19.14■□□□□ 0.65
PMS1-213ENST00000441310 ZNF202O95125 648 aa19.14■□□□□ 0.65
PMS1-213ENST00000441310 ADORA1P30542 326 aa19.14■□□□□ 0.65
PMS1-213ENST00000441310 EIF5P55010 431 aaKnown RBP19.14■□□□□ 0.65
PMS1-213ENST00000441310 CEP126Q9P2H0 1117 aa19.14■□□□□ 0.65
PMS1-213ENST00000441310 POLR3DP05423 398 aaPredicted RBP19.13■□□□□ 0.65
PMS1-213ENST00000441310 HNRNPH1P31943 449 aaKnown RBP19.13■□□□□ 0.65
PMS1-213ENST00000441310 IL15P40933 162 aaPredicted RBP19.13■□□□□ 0.65
PMS1-213ENST00000441310 OTUD7BQ6GQQ9 843 aa19.13■□□□□ 0.65
PMS1-213ENST00000441310 SMARCC2Q8TAQ2 1214 aa19.13■□□□□ 0.65
PMS1-213ENST00000441310 AFAP1L1Q8TED9 768 aa19.13■□□□□ 0.65
PMS1-213ENST00000441310 CLIC4Q9Y696 253 aa19.13■□□□□ 0.65
PMS1-213ENST00000441310 COL15A1P39059 1388 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms