RNA–Protein interactions for RNA: ENST00000438571.5

GTF3A-204, Transcript of general transcription factor IIIA, humanhuman

TSL 5

Gene GTF3A, Length 792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-204ENST00000438571 DDTLA6NHG4 134 aaPredicted RBP22.5■■□□□ 1.19
GTF3A-204ENST00000438571 WDHD1O75717 1129 aaPredicted RBP22.5■■□□□ 1.19
GTF3A-204ENST00000438571 MYCP01106 439 aaPredicted RBP22.5■■□□□ 1.19
GTF3A-204ENST00000438571 BTDP43251 543 aa22.5■■□□□ 1.19
GTF3A-204ENST00000438571 ATF7IPQ6VMQ6 1270 aa22.5■■□□□ 1.19
GTF3A-204ENST00000438571 ZGPATQ8N5A5 531 aaKnown RBP22.5■■□□□ 1.19
GTF3A-204ENST00000438571 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.5■■□□□ 1.19
GTF3A-204ENST00000438571 MROH7-TTC4A0A0A0MT08 1334 aa22.5■■□□□ 1.19
GTF3A-204ENST00000438571 PHF20L1A8MW92 1017 aa22.49■■□□□ 1.19
GTF3A-204ENST00000438571 PDHXO00330 501 aa22.49■■□□□ 1.19
GTF3A-204ENST00000438571 PICALMQ13492 652 aa22.49■■□□□ 1.19
GTF3A-204ENST00000438571 C17orf99Q6UX52 265 aa22.49■■□□□ 1.19
GTF3A-204ENST00000438571 ANKRD23Q86SG2 305 aa22.49■■□□□ 1.19
GTF3A-204ENST00000438571 SH3TC2Q8TF17 1288 aa22.49■■□□□ 1.19
GTF3A-204ENST00000438571 NEUROD6Q96NK8 337 aa22.49■■□□□ 1.19
GTF3A-204ENST00000438571 HMG20BQ9P0W2 317 aa22.49■■□□□ 1.19
GTF3A-204ENST00000438571 ENTPD3O75355 529 aa22.48■■□□□ 1.19
GTF3A-204ENST00000438571 MECOMQ03112 1051 aa22.48■■□□□ 1.19
GTF3A-204ENST00000438571 SLC9C1Q4G0N8 1177 aa22.48■■□□□ 1.19
GTF3A-204ENST00000438571 RHBDL3P58872 404 aa22.47■■□□□ 1.19
GTF3A-204ENST00000438571 MVPQ14764 893 aaKnown RBP22.47■■□□□ 1.19
GTF3A-204ENST00000438571 GPAT2Q6NUI2 795 aa22.47■■□□□ 1.19
GTF3A-204ENST00000438571 TBC1D9Q6ZT07 1266 aa22.47■■□□□ 1.19
GTF3A-204ENST00000438571 CCDC84Q86UT8 332 aaPredicted RBP22.47■■□□□ 1.19
GTF3A-204ENST00000438571 TMEM57Q8N5G2 664 aa22.47■■□□□ 1.19
GTF3A-204ENST00000438571 AKAP2Q9Y2D5 859 aa22.47■■□□□ 1.19
GTF3A-204ENST00000438571 FAM196BA6NMK8 535 aa22.46■■□□□ 1.19
GTF3A-204ENST00000438571 GNAI2P04899 355 aa22.46■■□□□ 1.19
GTF3A-204ENST00000438571 ERICH6Q7L0X2 663 aa22.46■■□□□ 1.19
GTF3A-204ENST00000438571 ZSCAN29Q8IWY8 852 aaPredicted RBP22.46■■□□□ 1.19
GTF3A-204ENST00000438571 SCYL3Q8IZE3 742 aa22.46■■□□□ 1.19
GTF3A-204ENST00000438571 FAM163AQ96GL9 167 aaPredicted RBP22.46■■□□□ 1.19
GTF3A-204ENST00000438571 CYP2C8P10632 490 aa22.45■■□□□ 1.18
GTF3A-204ENST00000438571 MCAMP43121 646 aa22.45■■□□□ 1.18
GTF3A-204ENST00000438571 TRIM47Q96LD4 638 aa22.45■■□□□ 1.18
GTF3A-204ENST00000438571 MYH1P12882 1939 aa22.45■■□□□ 1.18
GTF3A-204ENST00000438571 GPR75-ASB3A0A0A6YYF3 556 aa22.44■■□□□ 1.18
GTF3A-204ENST00000438571 IPO8O15397 1037 aaKnown RBP22.44■■□□□ 1.18
GTF3A-204ENST00000438571 PTPRAP18433 802 aa22.44■■□□□ 1.18
GTF3A-204ENST00000438571 ARID4AP29374 1257 aaPredicted RBP22.44■■□□□ 1.18
GTF3A-204ENST00000438571 KIF22Q14807 665 aa22.44■■□□□ 1.18
GTF3A-204ENST00000438571 ARHGEF6Q15052 776 aa22.44■■□□□ 1.18
GTF3A-204ENST00000438571 SPATA5Q8NB90 893 aa22.44■■□□□ 1.18
GTF3A-204ENST00000438571 PSMC4P43686 418 aa22.43■■□□□ 1.18
GTF3A-204ENST00000438571 MAP3K10Q02779 954 aa22.43■■□□□ 1.18
GTF3A-204ENST00000438571 SPTY2D1Q68D10 685 aaPredicted RBP22.43■■□□□ 1.18
GTF3A-204ENST00000438571 NSUN4Q96CB9 384 aaKnown RBP22.43■■□□□ 1.18
GTF3A-204ENST00000438571 C1orf115Q9H7X2 142 aa22.43■■□□□ 1.18
GTF3A-204ENST00000438571 ZHX2Q9Y6X8 837 aa22.43■■□□□ 1.18
GTF3A-204ENST00000438571 A0A0G2JLL6 359 aaPredicted RBP22.42■■□□□ 1.18
GTF3A-204ENST00000438571 CXCL11O14625 94 aa22.42■■□□□ 1.18
GTF3A-204ENST00000438571 OSBPP22059 807 aa22.42■■□□□ 1.18
GTF3A-204ENST00000438571 PRRT2Q7Z6L0 340 aaPredicted RBP22.42■■□□□ 1.18
GTF3A-204ENST00000438571 SLF2Q8IX21 1173 aa22.42■■□□□ 1.18
GTF3A-204ENST00000438571 TMEM106CQ9BVX2 250 aa22.42■■□□□ 1.18
GTF3A-204ENST00000438571 AFG3L2Q9Y4W6 797 aa22.42■■□□□ 1.18
GTF3A-204ENST00000438571 BCRP11274 1271 aa22.41■■□□□ 1.18
GTF3A-204ENST00000438571 G3BP1Q13283 466 aaKnown RBP eCLIP22.41■■□□□ 1.18
GTF3A-204ENST00000438571 MTFR1Q15390 333 aa22.41■■□□□ 1.18
GTF3A-204ENST00000438571 SLC4A8Q2Y0W8 1093 aa22.41■■□□□ 1.18
GTF3A-204ENST00000438571 NBPF11Q86T75 865 aa22.41■■□□□ 1.18
GTF3A-204ENST00000438571 PICK1Q9NRD5 415 aa22.41■■□□□ 1.18
GTF3A-204ENST00000438571 POLA2Q14181 598 aa22.4■■□□□ 1.18
GTF3A-204ENST00000438571 GORABQ5T7V8 394 aa22.4■■□□□ 1.18
GTF3A-204ENST00000438571 ZKSCAN2Q63HK3 967 aa22.4■■□□□ 1.18
GTF3A-204ENST00000438571 GADL1Q6ZQY3 521 aa22.4■■□□□ 1.18
GTF3A-204ENST00000438571 PARK7Q99497 189 aaKnown RBP22.4■■□□□ 1.18
GTF3A-204ENST00000438571 SNRKQ9NRH2 765 aa22.4■■□□□ 1.18
GTF3A-204ENST00000438571 RAI14Q9P0K7 980 aa22.4■■□□□ 1.18
GTF3A-204ENST00000438571 SRRDQ9UH36 339 aa22.4■■□□□ 1.18
GTF3A-204ENST00000438571 MYPNQ86TC9 1320 aa22.39■■□□□ 1.18
GTF3A-204ENST00000438571 PLXNB2O15031 1838 aa22.39■■□□□ 1.17
GTF3A-204ENST00000438571 RRP1BQ14684 758 aaKnown RBP22.39■■□□□ 1.17
GTF3A-204ENST00000438571 DBNDD2Q9BQY9 259 aa22.39■■□□□ 1.17
GTF3A-204ENST00000438571 COL2A1P02458 1487 aaPredicted RBP22.39■■□□□ 1.17
GTF3A-204ENST00000438571 TRIM75PA6NK02 468 aa22.38■■□□□ 1.17
GTF3A-204ENST00000438571 FMNL1O95466 1100 aaPredicted RBP22.38■■□□□ 1.17
GTF3A-204ENST00000438571 GNRH1P01148 92 aa22.38■■□□□ 1.17
GTF3A-204ENST00000438571 SHISA4Q96DD7 197 aa22.38■■□□□ 1.17
GTF3A-204ENST00000438571 OSBPL5Q9H0X9 879 aaPredicted RBP22.38■■□□□ 1.17
GTF3A-204ENST00000438571 ALPK3Q96L96 1907 aa22.37■■□□□ 1.17
GTF3A-204ENST00000438571 CTNND1O60716 968 aaKnown RBP22.37■■□□□ 1.17
GTF3A-204ENST00000438571 RLBP1P12271 317 aa22.37■■□□□ 1.17
GTF3A-204ENST00000438571 HNRNPUQ00839 825 aaKnown RBP eCLIP22.37■■□□□ 1.17
GTF3A-204ENST00000438571 PRKCZQ05513 592 aa22.37■■□□□ 1.17
GTF3A-204ENST00000438571 TNNI3KQ59H18 835 aa22.37■■□□□ 1.17
GTF3A-204ENST00000438571 SH3RF3Q8TEJ3 882 aaPredicted RBP22.37■■□□□ 1.17
GTF3A-204ENST00000438571 GABRQQ9UN88 632 aa22.37■■□□□ 1.17
GTF3A-204ENST00000438571 FPGT-TNNI3KV9GXZ4 949 aa22.37■■□□□ 1.17
GTF3A-204ENST00000438571 PRMT2P55345 433 aa22.36■■□□□ 1.17
GTF3A-204ENST00000438571 ADGRA1Q86SQ6 560 aa22.36■■□□□ 1.17
GTF3A-204ENST00000438571 SSH3Q8TE77 659 aa22.36■■□□□ 1.17
GTF3A-204ENST00000438571 NPM3O75607 178 aaKnown RBP22.35■■□□□ 1.17
GTF3A-204ENST00000438571 GSTO1P78417 241 aa22.35■■□□□ 1.17
GTF3A-204ENST00000438571 ATP8B2P98198 1209 aa22.35■■□□□ 1.17
GTF3A-204ENST00000438571 TREML2Q5T2D2 321 aa22.35■■□□□ 1.17
GTF3A-204ENST00000438571 FASTKD5Q7L8L6 764 aaKnown RBP22.35■■□□□ 1.17
GTF3A-204ENST00000438571 TEX11Q8IYF3 940 aa22.35■■□□□ 1.17
GTF3A-204ENST00000438571 MIER1Q8N108 512 aa22.35■■□□□ 1.17
GTF3A-204ENST00000438571 RAET1EQ8TD07 263 aa22.35■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms