RNA–Protein interactions for RNA: ENST00000434278.5

LMBR1-208, Transcript of limb development membrane protein 1, humanhuman

TSL 5

Gene LMBR1, Length 678 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-208ENST00000434278 PICALMQ13492 652 aa24.76■■□□□ 1.55
LMBR1-208ENST00000434278 ERO1BQ86YB8 467 aa24.76■■□□□ 1.55
LMBR1-208ENST00000434278 RHPN1Q8TCX5 695 aa24.76■■□□□ 1.55
LMBR1-208ENST00000434278 IL1RAPL2Q9NP60 686 aa24.76■■□□□ 1.55
LMBR1-208ENST00000434278 DDTLA6NHG4 134 aaPredicted RBP24.75■■□□□ 1.55
LMBR1-208ENST00000434278 HSP90AB4PQ58FF6 505 aa24.75■■□□□ 1.55
LMBR1-208ENST00000434278 AACSQ86V21 672 aa24.75■■□□□ 1.55
LMBR1-208ENST00000434278 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.75■■□□□ 1.55
LMBR1-208ENST00000434278 BRI3BPQ8WY22 251 aa24.75■■□□□ 1.55
LMBR1-208ENST00000434278 CHMP4BQ9H444 224 aaKnown RBP24.75■■□□□ 1.55
LMBR1-208ENST00000434278 PIH1D3Q9NQM4 214 aaKnown RBP24.75■■□□□ 1.55
LMBR1-208ENST00000434278 DOCK2Q92608 1830 aa24.75■■□□□ 1.55
LMBR1-208ENST00000434278 HMMRO75330 724 aa24.74■■□□□ 1.55
LMBR1-208ENST00000434278 GTF2A2P52657 109 aa24.74■■□□□ 1.55
LMBR1-208ENST00000434278 CTU1Q7Z7A3 348 aaKnown RBP24.74■■□□□ 1.55
LMBR1-208ENST00000434278 ZSCAN29Q8IWY8 852 aaPredicted RBP24.74■■□□□ 1.55
LMBR1-208ENST00000434278 MAST2Q6P0Q8 1798 aa24.74■■□□□ 1.55
LMBR1-208ENST00000434278 MYO5AQ9Y4I1 1855 aaKnown RBP24.74■■□□□ 1.55
LMBR1-208ENST00000434278 CCL15-CCL14A0A0B4J2E2 113 aa24.73■■□□□ 1.55
LMBR1-208ENST00000434278 APBB1O00213 710 aa24.73■■□□□ 1.55
LMBR1-208ENST00000434278 IRF6O14896 467 aa24.73■■□□□ 1.55
LMBR1-208ENST00000434278 SLURP2P0DP57 97 aa24.73■■□□□ 1.55
LMBR1-208ENST00000434278 CCL15Q16663 113 aa24.73■■□□□ 1.55
LMBR1-208ENST00000434278 OTUD7BQ6GQQ9 843 aa24.73■■□□□ 1.55
LMBR1-208ENST00000434278 CCDC85CA6NKD9 419 aa24.72■■□□□ 1.55
LMBR1-208ENST00000434278 FKTNO75072 461 aa24.72■■□□□ 1.55
LMBR1-208ENST00000434278 MAP4K4O95819 1239 aaPredicted RBP24.72■■□□□ 1.55
LMBR1-208ENST00000434278 CRHR2Q13324 411 aa24.72■■□□□ 1.55
LMBR1-208ENST00000434278 PPIL2Q13356 520 aa24.72■■□□□ 1.55
LMBR1-208ENST00000434278 NAA16Q6N069 864 aaPredicted RBP24.72■■□□□ 1.55
LMBR1-208ENST00000434278 ADGRA1Q86SQ6 560 aa24.72■■□□□ 1.55
LMBR1-208ENST00000434278 NDUFB9Q9Y6M9 179 aa24.72■■□□□ 1.55
LMBR1-208ENST00000434278 PHF20L1A8MW92 1017 aa24.71■■□□□ 1.55
LMBR1-208ENST00000434278 NPM3O75607 178 aaKnown RBP24.71■■□□□ 1.55
LMBR1-208ENST00000434278 MAP3K10Q02779 954 aa24.71■■□□□ 1.55
LMBR1-208ENST00000434278 PPATQ06203 517 aa24.71■■□□□ 1.55
LMBR1-208ENST00000434278 NOL9Q5SY16 702 aaKnown RBP24.71■■□□□ 1.55
LMBR1-208ENST00000434278 SH3RF3Q8TEJ3 882 aaPredicted RBP24.71■■□□□ 1.55
LMBR1-208ENST00000434278 FAM43AQ8N2R8 423 aa24.7■■□□□ 1.54
LMBR1-208ENST00000434278 KIF1BPQ96EK5 621 aa24.7■■□□□ 1.54
LMBR1-208ENST00000434278 AATFQ9NY61 560 aaKnown RBP eCLIP24.7■■□□□ 1.54
LMBR1-208ENST00000434278 TEX11Q8IYF3 940 aa24.69■■□□□ 1.54
LMBR1-208ENST00000434278 ANTXR1Q9H6X2 564 aa24.69■■□□□ 1.54
LMBR1-208ENST00000434278 RAB11FIP3O75154 756 aa24.68■■□□□ 1.54
LMBR1-208ENST00000434278 CETPP11597 493 aa24.68■■□□□ 1.54
LMBR1-208ENST00000434278 PPP4CP60510 307 aa24.68■■□□□ 1.54
LMBR1-208ENST00000434278 SNAPC2Q13487 334 aa24.68■■□□□ 1.54
LMBR1-208ENST00000434278 CLASRPQ8N2M8 674 aaKnown RBP24.68■■□□□ 1.54
LMBR1-208ENST00000434278 NOL10Q9BSC4 688 aaKnown RBP24.68■■□□□ 1.54
LMBR1-208ENST00000434278 OSBPL5Q9H0X9 879 aaPredicted RBP24.68■■□□□ 1.54
LMBR1-208ENST00000434278 IGSF3O75054 1194 aa24.67■■□□□ 1.54
LMBR1-208ENST00000434278 BAG3O95817 575 aa24.67■■□□□ 1.54
LMBR1-208ENST00000434278 COL2A1P02458 1487 aaPredicted RBP24.66■■□□□ 1.54
LMBR1-208ENST00000434278 IDH1O75874 414 aaKnown RBP24.66■■□□□ 1.54
LMBR1-208ENST00000434278 BCL11AQ9H165 835 aa24.66■■□□□ 1.54
LMBR1-208ENST00000434278 KCNH4Q9UQ05 1017 aa24.66■■□□□ 1.54
LMBR1-208ENST00000434278 FAM196BA6NMK8 535 aa24.65■■□□□ 1.54
LMBR1-208ENST00000434278 BTBD19C9JJ37 291 aa24.65■■□□□ 1.54
LMBR1-208ENST00000434278 TAF1CQ15572 869 aaPredicted RBP24.65■■□□□ 1.54
LMBR1-208ENST00000434278 SCYL3Q8IZE3 742 aa24.65■■□□□ 1.54
LMBR1-208ENST00000434278 TBC1D12O60347 775 aa24.64■■□□□ 1.54
LMBR1-208ENST00000434278 IFIT2P09913 472 aaKnown RBP24.64■■□□□ 1.54
LMBR1-208ENST00000434278 CYP7A1P22680 504 aa24.64■■□□□ 1.54
LMBR1-208ENST00000434278 DYNLL1P63167 89 aaKnown RBP24.64■■□□□ 1.54
LMBR1-208ENST00000434278 PKN2Q16513 984 aaKnown RBP24.64■■□□□ 1.54
LMBR1-208ENST00000434278 CDK5RAP2Q96SN8 1893 aa24.64■■□□□ 1.53
LMBR1-208ENST00000434278 PLCG2P16885 1265 aa24.63■■□□□ 1.53
LMBR1-208ENST00000434278 MAGEB6Q8N7X4 407 aa24.63■■□□□ 1.53
LMBR1-208ENST00000434278 TGFBRAP1Q8WUH2 860 aa24.63■■□□□ 1.53
LMBR1-208ENST00000434278 YTHDC1Q96MU7 727 aaKnown RBP24.63■■□□□ 1.53
LMBR1-208ENST00000434278 ZFYVE28Q9HCC9 887 aa24.63■■□□□ 1.53
LMBR1-208ENST00000434278 CTNND1O60716 968 aaKnown RBP24.62■■□□□ 1.53
LMBR1-208ENST00000434278 PTPRAP18433 802 aa24.62■■□□□ 1.53
LMBR1-208ENST00000434278 MOGSQ13724 837 aa24.62■■□□□ 1.53
LMBR1-208ENST00000434278 MAPKAPK5Q8IW41 473 aa24.62■■□□□ 1.53
LMBR1-208ENST00000434278 XPO5Q9HAV4 1204 aaKnown RBP eCLIP24.62■■□□□ 1.539e-7■■□□□ 13
LMBR1-208ENST00000434278 PICK1Q9NRD5 415 aa24.62■■□□□ 1.53
LMBR1-208ENST00000434278 HPS5Q9UPZ3 1129 aa24.62■■□□□ 1.53
LMBR1-208ENST00000434278 ZHX2Q9Y6X8 837 aa24.62■■□□□ 1.53
LMBR1-208ENST00000434278 DOCK1Q14185 1865 aa24.62■■□□□ 1.53
LMBR1-208ENST00000434278 FOCADQ5VW36 1801 aa24.61■■□□□ 1.53
LMBR1-208ENST00000434278 CAP1Q01518 475 aa24.61■■□□□ 1.53
LMBR1-208ENST00000434278 SP3Q02447 781 aa24.61■■□□□ 1.53
LMBR1-208ENST00000434278 MIGA1Q8NAN2 632 aa24.61■■□□□ 1.53
LMBR1-208ENST00000434278 CD99L2Q8TCZ2 262 aa24.61■■□□□ 1.53
LMBR1-208ENST00000434278 PPIL4Q8WUA2 492 aaKnown RBP eCLIP24.61■■□□□ 1.53
LMBR1-208ENST00000434278 ZCCHC17Q9NP64 241 aaKnown RBP24.61■■□□□ 1.53
LMBR1-208ENST00000434278 FRMD4AQ9P2Q2 1039 aaPredicted RBP24.61■■□□□ 1.53
LMBR1-208ENST00000434278 SIPA1L1O43166 1804 aa24.61■■□□□ 1.53
LMBR1-208ENST00000434278 FLT1P17948 1338 aa24.61■■□□□ 1.53
LMBR1-208ENST00000434278 CXCL11O14625 94 aa24.6■■□□□ 1.53
LMBR1-208ENST00000434278 MAP3K12Q12852 859 aa24.6■■□□□ 1.53
LMBR1-208ENST00000434278 ERO1AQ96HE7 468 aa24.6■■□□□ 1.53
LMBR1-208ENST00000434278 TRIM17Q9Y577 477 aa24.6■■□□□ 1.53
LMBR1-208ENST00000434278 RRP1BQ14684 758 aaKnown RBP24.59■■□□□ 1.53
LMBR1-208ENST00000434278 FBXO46Q6PJ61 603 aaPredicted RBP24.59■■□□□ 1.53
LMBR1-208ENST00000434278 OTOP1Q7RTM1 612 aa24.59■■□□□ 1.53
LMBR1-208ENST00000434278 ANKRD23Q86SG2 305 aa24.59■■□□□ 1.53
LMBR1-208ENST00000434278 CCDC84Q86UT8 332 aaPredicted RBP24.59■■□□□ 1.53
LMBR1-208ENST00000434278 AFG3L2Q9Y4W6 797 aa24.59■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms