RNA–Protein interactions for RNA: ENST00000431742.2

CSTF3-202, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 2 BASIC

Gene CSTF3, Length 715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-202ENST00000431742 ATRNL1Q5VV63 1379 aa17.36■□□□□ 0.37
CSTF3-202ENST00000431742 MBD4O95243 580 aa17.35■□□□□ 0.37
CSTF3-202ENST00000431742 SDSP20132 328 aa17.35■□□□□ 0.37
CSTF3-202ENST00000431742 CDAN1Q8IWY9 1227 aa17.35■□□□□ 0.37
CSTF3-202ENST00000431742 OSBP2Q969R2 916 aa17.35■□□□□ 0.37
CSTF3-202ENST00000431742 RILPL2Q969X0 211 aa17.35■□□□□ 0.37
CSTF3-202ENST00000431742 MYH8P13535 1937 aa17.35■□□□□ 0.37
CSTF3-202ENST00000431742 FLT1P17948 1338 aa17.34■□□□□ 0.37
CSTF3-202ENST00000431742 TCP10Q12799 353 aa17.34■□□□□ 0.37
CSTF3-202ENST00000431742 PRAMEF18Q5VWM3 479 aa17.34■□□□□ 0.37
CSTF3-202ENST00000431742 CST9Q5W186 159 aa17.34■□□□□ 0.37
CSTF3-202ENST00000431742 ZFPM1Q8IX07 1006 aa17.34■□□□□ 0.37
CSTF3-202ENST00000431742 ARMT1Q9H993 441 aa17.34■□□□□ 0.37
CSTF3-202ENST00000431742 ATAD5Q96QE3 1844 aa17.33■□□□□ 0.37
CSTF3-202ENST00000431742 M0R2C6 588 aa17.33■□□□□ 0.36
CSTF3-202ENST00000431742 APLP1P51693 650 aa17.33■□□□□ 0.36
CSTF3-202ENST00000431742 PICALMQ13492 652 aa17.33■□□□□ 0.36
CSTF3-202ENST00000431742 BMP2KLQ5H9B9 411 aa17.33■□□□□ 0.36
CSTF3-202ENST00000431742 NBPF12Q5TAG4 269 aaPredicted RBP17.33■□□□□ 0.36
CSTF3-202ENST00000431742 SH3BP5LQ7L8J4 393 aa17.33■□□□□ 0.36
CSTF3-202ENST00000431742 CRNKL1Q9BZJ0 848 aaKnown RBP17.33■□□□□ 0.36
CSTF3-202ENST00000431742 OSBPL5Q9H0X9 879 aaPredicted RBP17.33■□□□□ 0.36
CSTF3-202ENST00000431742 MKRN1Q9UHC7 482 aaKnown RBP17.33■□□□□ 0.36
CSTF3-202ENST00000431742 LAMA4Q16363 1823 aa17.33■□□□□ 0.36
CSTF3-202ENST00000431742 CELF2O95319 508 aaKnown RBP17.32■□□□□ 0.36
CSTF3-202ENST00000431742 TGFBRAP1Q8WUH2 860 aa17.32■□□□□ 0.36
CSTF3-202ENST00000431742 AIDAQ96BJ3 306 aa17.32■□□□□ 0.36
CSTF3-202ENST00000431742 STRBPQ96SI9 672 aaKnown RBP17.32■□□□□ 0.36
CSTF3-202ENST00000431742 SEC62Q99442 399 aaKnown RBP17.32■□□□□ 0.36
CSTF3-202ENST00000431742 DOCK1Q14185 1865 aa17.31■□□□□ 0.36
CSTF3-202ENST00000431742 A0A0D9SFI3 127 aa17.31■□□□□ 0.36
CSTF3-202ENST00000431742 GPAA1O43292 621 aa17.31■□□□□ 0.36
CSTF3-202ENST00000431742 NMIQ13287 307 aaPredicted RBP17.31■□□□□ 0.36
CSTF3-202ENST00000431742 SUPT20HL1Q3ZLR7 823 aa17.31■□□□□ 0.36
CSTF3-202ENST00000431742 MAPKAPK5Q8IW41 473 aa17.31■□□□□ 0.36
CSTF3-202ENST00000431742 FAM227BQ96M60 508 aa17.31■□□□□ 0.36
CSTF3-202ENST00000431742 HELLSQ9NRZ9 838 aa17.31■□□□□ 0.36
CSTF3-202ENST00000431742 DDTLA6NHG4 134 aaPredicted RBP17.3■□□□□ 0.36
CSTF3-202ENST00000431742 TMEM88BA6NKF7 163 aa17.3■□□□□ 0.36
CSTF3-202ENST00000431742 HIP1O00291 1037 aa17.3■□□□□ 0.36
CSTF3-202ENST00000431742 PRKAB2O43741 272 aa17.3■□□□□ 0.36
CSTF3-202ENST00000431742 HSPA6P17066 643 aa17.3■□□□□ 0.36
CSTF3-202ENST00000431742 NF2P35240 595 aa17.3■□□□□ 0.36
CSTF3-202ENST00000431742 FKBP1BP68106 108 aa17.3■□□□□ 0.36
CSTF3-202ENST00000431742 SDR42E1Q8WUS8 393 aa17.3■□□□□ 0.36
CSTF3-202ENST00000431742 ZNF408Q9H9D4 720 aa17.3■□□□□ 0.36
CSTF3-202ENST00000431742 GBA2Q9HCG7 927 aaPredicted RBP17.3■□□□□ 0.36
CSTF3-202ENST00000431742 USP5P45974 858 aa17.29■□□□□ 0.36
CSTF3-202ENST00000431742 DCP1AQ9NPI6 582 aaPredicted RBP17.29■□□□□ 0.36
CSTF3-202ENST00000431742 CREBZFQ9NS37 354 aa17.29■□□□□ 0.36
CSTF3-202ENST00000431742 GNAT2P19087 354 aa17.28■□□□□ 0.36
CSTF3-202ENST00000431742 MAP3K10Q02779 954 aa17.28■□□□□ 0.36
CSTF3-202ENST00000431742 MAP3K11Q16584 847 aa17.28■□□□□ 0.36
CSTF3-202ENST00000431742 MCMDC2Q4G0Z9 681 aa17.28■□□□□ 0.36
CSTF3-202ENST00000431742 CCDC129Q6ZRS4 1044 aa17.28■□□□□ 0.36
CSTF3-202ENST00000431742 HOOK2Q96ED9 719 aa17.28■□□□□ 0.36
CSTF3-202ENST00000431742 CSRNP1Q96S65 589 aa17.28■□□□□ 0.36
CSTF3-202ENST00000431742 RNF39Q9H2S5 420 aa17.28■□□□□ 0.36
CSTF3-202ENST00000431742 DHX36Q9H2U1 1008 aaKnown RBP17.28■□□□□ 0.36
CSTF3-202ENST00000431742 DIAPH3Q9NSV4 1193 aa17.28■□□□□ 0.36
CSTF3-202ENST00000431742 ATP8A2Q9NTI2 1148 aa17.28■□□□□ 0.36
CSTF3-202ENST00000431742 SLC4A4Q9Y6R1 1079 aa17.28■□□□□ 0.36
CSTF3-202ENST00000431742 THSD7BQ9C0I4 1608 aa17.28■□□□□ 0.36
CSTF3-202ENST00000431742 PHIPQ8WWQ0 1821 aa17.27■□□□□ 0.36
CSTF3-202ENST00000431742 GSG1L2A8MUP6 293 aa17.27■□□□□ 0.36
CSTF3-202ENST00000431742 FOXP2O15409 715 aa17.27■□□□□ 0.36
CSTF3-202ENST00000431742 CHMLP26374 656 aa17.27■□□□□ 0.36
CSTF3-202ENST00000431742 CACNB1Q02641 598 aaPredicted RBP17.27■□□□□ 0.36
CSTF3-202ENST00000431742 ZSCAN29Q8IWY8 852 aaPredicted RBP17.27■□□□□ 0.36
CSTF3-202ENST00000431742 C2orf69Q8N8R5 385 aa17.27■□□□□ 0.36
CSTF3-202ENST00000431742 EPB41L4AQ9HCS5 686 aaPredicted RBP17.27■□□□□ 0.36
CSTF3-202ENST00000431742 PALD1Q9ULE6 856 aa17.27■□□□□ 0.36
CSTF3-202ENST00000431742 TLL2Q9Y6L7 1015 aa17.27■□□□□ 0.36
CSTF3-202ENST00000431742 CCDC171Q6TFL3 1326 aa17.26■□□□□ 0.35
CSTF3-202ENST00000431742 DCAF15Q66K64 600 aa17.26■□□□□ 0.35
CSTF3-202ENST00000431742 GIMAP6Q6P9H5 292 aa17.26■□□□□ 0.35
CSTF3-202ENST00000431742 CWC27Q6UX04 472 aaKnown RBP17.26■□□□□ 0.35
CSTF3-202ENST00000431742 MOB2Q70IA6 237 aa17.26■□□□□ 0.35
CSTF3-202ENST00000431742 SAPCD2Q86UD0 394 aa17.26■□□□□ 0.35
CSTF3-202ENST00000431742 ZNF589Q86UQ0 364 aaPredicted RBP17.26■□□□□ 0.35
CSTF3-202ENST00000431742 METTL16Q86W50 562 aaKnown RBP17.26■□□□□ 0.35
CSTF3-202ENST00000431742 SAP30BPQ9UHR5 308 aaKnown RBP17.26■□□□□ 0.35
CSTF3-202ENST00000431742 FZD1Q9UP38 647 aa17.26■□□□□ 0.35
CSTF3-202ENST00000431742 RAD50Q92878 1312 aa17.25■□□□□ 0.35
CSTF3-202ENST00000431742 PPP1R12BO60237 982 aaPredicted RBP17.25■□□□□ 0.35
CSTF3-202ENST00000431742 TBC1D12O60347 775 aa17.25■□□□□ 0.35
CSTF3-202ENST00000431742 USP2O75604 605 aaPredicted RBP17.25■□□□□ 0.35
CSTF3-202ENST00000431742 LDLRAD1Q5T700 205 aa17.25■□□□□ 0.35
CSTF3-202ENST00000431742 EHD4Q9H223 541 aa17.25■□□□□ 0.35
CSTF3-202ENST00000431742 IL25Q9H293 177 aa17.25■□□□□ 0.35
CSTF3-202ENST00000431742 MCM9Q9NXL9 1143 aa17.25■□□□□ 0.35
CSTF3-202ENST00000431742 PI4KBQ9UBF8 816 aa17.25■□□□□ 0.35
CSTF3-202ENST00000431742 ANGEL1Q9UNK9 670 aaKnown RBP17.25■□□□□ 0.35
CSTF3-202ENST00000431742 GTF3C3Q9Y5Q9 886 aa17.25■□□□□ 0.35
CSTF3-202ENST00000431742 PTPRFP10586 1907 aa17.24■□□□□ 0.35
CSTF3-202ENST00000431742 GREB1LQ9C091 1923 aaPredicted RBP17.24■□□□□ 0.35
CSTF3-202ENST00000431742 PATL2C9JE40 543 aaKnown RBP17.24■□□□□ 0.35
CSTF3-202ENST00000431742 PRKG1Q13976 671 aa17.24■□□□□ 0.35
CSTF3-202ENST00000431742 VPS53Q5VIR6 699 aa17.24■□□□□ 0.35
CSTF3-202ENST00000431742 ARMC9Q7Z3E5 817 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms