RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 TDO2P48775 406 aa21.65■■□□□ 1.06
HMGN1-206ENST00000431390 MCM2P49736 904 aa21.65■■□□□ 1.06
HMGN1-206ENST00000431390 HDLBPQ00341 1268 aaKnown RBP21.65■■□□□ 1.06
HMGN1-206ENST00000431390 HHIPL2Q6UWX4 724 aa21.65■■□□□ 1.06
HMGN1-206ENST00000431390 RUFY3Q7L099 469 aa21.65■■□□□ 1.06
HMGN1-206ENST00000431390 SDR42E1Q8WUS8 393 aa21.65■■□□□ 1.06
HMGN1-206ENST00000431390 ATP8A2Q9NTI2 1148 aa21.65■■□□□ 1.06
HMGN1-206ENST00000431390 WBP1LQ9NX94 342 aa21.65■■□□□ 1.06
HMGN1-206ENST00000431390 CYP46A1Q9Y6A2 500 aa21.65■■□□□ 1.06
HMGN1-206ENST00000431390 TRPM7Q96QT4 1865 aa21.65■■□□□ 1.06
HMGN1-206ENST00000431390 BTDP43251 543 aa21.65■■□□□ 1.06
HMGN1-206ENST00000431390 BLOC1S2Q6QNY1 142 aa21.65■■□□□ 1.06
HMGN1-206ENST00000431390 NEK1Q96PY6 1258 aa21.65■■□□□ 1.06
HMGN1-206ENST00000431390 BAZ2AQ9UIF9 1905 aaKnown RBP21.64■■□□□ 1.05
HMGN1-206ENST00000431390 RASSF10A6NK89 507 aa21.64■■□□□ 1.05
HMGN1-206ENST00000431390 CD2BP2O95400 341 aaKnown RBP21.64■■□□□ 1.05
HMGN1-206ENST00000431390 HMGB1P09429 215 aaKnown RBP21.64■■□□□ 1.05
HMGN1-206ENST00000431390 LBX1P52954 281 aa21.64■■□□□ 1.05
HMGN1-206ENST00000431390 DEFB115Q30KQ5 88 aa21.64■■□□□ 1.05
HMGN1-206ENST00000431390 JDP2Q8WYK2 163 aa21.64■■□□□ 1.05
HMGN1-206ENST00000431390 TEKT1Q969V4 418 aa21.64■■□□□ 1.05
HMGN1-206ENST00000431390 DAGLAQ9Y4D2 1042 aa21.64■■□□□ 1.05
HMGN1-206ENST00000431390 FOCADQ5VW36 1801 aa21.64■■□□□ 1.05
HMGN1-206ENST00000431390 LAMB1P07942 1786 aa21.63■■□□□ 1.05
HMGN1-206ENST00000431390 E7EWF7 191 aa21.63■■□□□ 1.05
HMGN1-206ENST00000431390 F8W031 263 aaPredicted RBP21.63■■□□□ 1.05
HMGN1-206ENST00000431390 VIL1P09327 827 aaKnown RBP21.63■■□□□ 1.05
HMGN1-206ENST00000431390 HAND2P61296 217 aa21.63■■□□□ 1.05
HMGN1-206ENST00000431390 RSBN1LQ6PCB5 846 aaPredicted RBP21.63■■□□□ 1.05
HMGN1-206ENST00000431390 STOX1Q6ZVD7 989 aa21.63■■□□□ 1.05
HMGN1-206ENST00000431390 TTC14Q96N46 770 aa21.63■■□□□ 1.05
HMGN1-206ENST00000431390 GJA3Q9Y6H8 435 aa21.63■■□□□ 1.05
HMGN1-206ENST00000431390 NAV1Q8NEY1 1877 aa21.62■■□□□ 1.05
HMGN1-206ENST00000431390 K7ELQ4 463 aaPredicted RBP21.62■■□□□ 1.05
HMGN1-206ENST00000431390 SH3RF3Q8TEJ3 882 aaPredicted RBP21.62■■□□□ 1.05
HMGN1-206ENST00000431390 ABT1Q9ULW3 272 aaKnown RBP21.62■■□□□ 1.05
HMGN1-206ENST00000431390 THSD7BQ9C0I4 1608 aa21.61■■□□□ 1.05
HMGN1-206ENST00000431390 PSMD14O00487 310 aa21.61■■□□□ 1.05
HMGN1-206ENST00000431390 RPS6KB1P23443 525 aa21.61■■□□□ 1.05
HMGN1-206ENST00000431390 EIF6P56537 245 aaKnown RBP21.61■■□□□ 1.05
HMGN1-206ENST00000431390 KIAA0825Q8IV33 1275 aa21.61■■□□□ 1.05
HMGN1-206ENST00000431390 ALDH8A1Q9H2A2 487 aaPredicted RBP21.61■■□□□ 1.05
HMGN1-206ENST00000431390 DCP1AQ9NPI6 582 aaPredicted RBP21.61■■□□□ 1.05
HMGN1-206ENST00000431390 ECM29Q5VYK3 1845 aa21.61■■□□□ 1.05
HMGN1-206ENST00000431390 WDR33Q9C0J8 1336 aaKnown RBP21.61■■□□□ 1.05
HMGN1-206ENST00000431390 RAD17O75943 681 aa21.61■■□□□ 1.05
HMGN1-206ENST00000431390 CRKP46108 304 aa21.61■■□□□ 1.05
HMGN1-206ENST00000431390 RHBDL3P58872 404 aa21.61■■□□□ 1.05
HMGN1-206ENST00000431390 PDRG1Q9NUG6 133 aa21.61■■□□□ 1.05
HMGN1-206ENST00000431390 ANAPC4Q9UJX5 808 aa21.61■■□□□ 1.05
HMGN1-206ENST00000431390 SERPINA10Q9UK55 444 aa21.61■■□□□ 1.05
HMGN1-206ENST00000431390 HSPA8P11142 646 aaKnown RBP21.6■■□□□ 1.05
HMGN1-206ENST00000431390 SCNN1DP51172 638 aa21.6■■□□□ 1.05
HMGN1-206ENST00000431390 ZDHHC15Q96MV8 337 aa21.6■■□□□ 1.05
HMGN1-206ENST00000431390 NBPF3Q9H094 633 aa21.6■■□□□ 1.05
HMGN1-206ENST00000431390 ARPP21Q9UBL0 812 aaPredicted RBP21.6■■□□□ 1.05
HMGN1-206ENST00000431390 CPA1P15085 419 aa21.59■■□□□ 1.05
HMGN1-206ENST00000431390 LMOD1P29536 600 aaPredicted RBP21.59■■□□□ 1.05
HMGN1-206ENST00000431390 USP5P45974 858 aa21.59■■□□□ 1.05
HMGN1-206ENST00000431390 FMR1Q06787 632 aaKnown RBP eCLIP21.59■■□□□ 1.052e-6■□□□□ 10.3
HMGN1-206ENST00000431390 PPARAQ07869 468 aa21.59■■□□□ 1.05
HMGN1-206ENST00000431390 SBK1Q52WX2 424 aa21.59■■□□□ 1.05
HMGN1-206ENST00000431390 TBC1D10CQ8IV04 446 aa21.59■■□□□ 1.05
HMGN1-206ENST00000431390 TEX11Q8IYF3 940 aa21.59■■□□□ 1.05
HMGN1-206ENST00000431390 NCOA7Q8NI08 942 aa21.59■■□□□ 1.05
HMGN1-206ENST00000431390 GMLQ99445 158 aa21.59■■□□□ 1.05
HMGN1-206ENST00000431390 DDX60LQ5H9U9 1706 aaKnown RBP21.59■■□□□ 1.05
HMGN1-206ENST00000431390 EPS15P42566 896 aa21.58■■□□□ 1.05
HMGN1-206ENST00000431390 SLC4A3P48751 1232 aa21.58■■□□□ 1.05
HMGN1-206ENST00000431390 CXCL9Q07325 125 aa21.58■■□□□ 1.05
HMGN1-206ENST00000431390 CIAPIN1Q6FI81 312 aa21.58■■□□□ 1.05
HMGN1-206ENST00000431390 CTR9Q6PD62 1173 aa21.58■■□□□ 1.05
HMGN1-206ENST00000431390 DHX32Q7L7V1 743 aaKnown RBP21.58■■□□□ 1.05
HMGN1-206ENST00000431390 AGBL3Q8NEM8 1001 aa21.58■■□□□ 1.05
HMGN1-206ENST00000431390 TRDNQ13061 729 aa21.57■■□□□ 1.04
HMGN1-206ENST00000431390 TNIP1Q15025 636 aa21.57■■□□□ 1.04
HMGN1-206ENST00000431390 STAG1Q8WVM7 1258 aa21.57■■□□□ 1.04
HMGN1-206ENST00000431390 RNF41Q9H4P4 317 aaPredicted RBP21.57■■□□□ 1.04
HMGN1-206ENST00000431390 AK2P54819 239 aa21.57■■□□□ 1.04
HMGN1-206ENST00000431390 ANKRD1Q15327 319 aa21.57■■□□□ 1.04
HMGN1-206ENST00000431390 AKNAD1Q5T1N1 836 aa21.57■■□□□ 1.04
HMGN1-206ENST00000431390 APOBEC3HQ6NTF7 200 aaKnown RBP21.57■■□□□ 1.04
HMGN1-206ENST00000431390 RALYLQ86SE5 291 aaKnown RBP21.57■■□□□ 1.04
HMGN1-206ENST00000431390 TGFBRAP1Q8WUH2 860 aa21.57■■□□□ 1.04
HMGN1-206ENST00000431390 CNNM2Q9H8M5 875 aa21.57■■□□□ 1.04
HMGN1-206ENST00000431390 HDAC9Q9UKV0 1011 aa21.57■■□□□ 1.04
HMGN1-206ENST00000431390 MYH1P12882 1939 aa21.57■■□□□ 1.04
HMGN1-206ENST00000431390 WDR19Q8NEZ3 1342 aa21.56■■□□□ 1.04
HMGN1-206ENST00000431390 MINDY4BA8MYZ0 360 aa21.56■■□□□ 1.04
HMGN1-206ENST00000431390 USP17L12C9JPN9 530 aa21.56■■□□□ 1.04
HMGN1-206ENST00000431390 USP17L21D6R901 530 aa21.56■■□□□ 1.04
HMGN1-206ENST00000431390 PCP11498 1178 aaKnown RBP21.56■■□□□ 1.04
HMGN1-206ENST00000431390 MMP14P50281 582 aa21.56■■□□□ 1.04
HMGN1-206ENST00000431390 EXOSC10Q01780 885 aaKnown RBP21.56■■□□□ 1.04
HMGN1-206ENST00000431390 MAP2K1Q02750 393 aaPredicted RBP21.56■■□□□ 1.04
HMGN1-206ENST00000431390 CTDSPL2Q05D32 466 aa21.56■■□□□ 1.04
HMGN1-206ENST00000431390 COL9A3Q14050 684 aaPredicted RBP21.56■■□□□ 1.04
HMGN1-206ENST00000431390 MB21D2Q8IYB1 491 aaPredicted RBP21.56■■□□□ 1.04
HMGN1-206ENST00000431390 MFSD6Q6ZSS7 791 aa21.55■■□□□ 1.04
HMGN1-206ENST00000431390 AMOTL1Q8IY63 956 aa21.55■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms