RNA–Protein interactions for RNA: ENST00000427785.5

RFC4-206, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-206ENST00000427785 USP17L21D6R901 530 aa14.31□□□□□ -0.12
RFC4-206ENST00000427785 USP17L8P0C7I0 530 aa14.31□□□□□ -0.12
RFC4-206ENST00000427785 PICALMQ13492 652 aa14.31□□□□□ -0.12
RFC4-206ENST00000427785 CFAP100Q494V2 611 aa14.31□□□□□ -0.12
RFC4-206ENST00000427785 APOBEC3HQ6NTF7 200 aaKnown RBP14.31□□□□□ -0.12
RFC4-206ENST00000427785 CDC42EP5Q6NZY7 148 aa14.31□□□□□ -0.12
RFC4-206ENST00000427785 GIMAP6Q6P9H5 292 aa14.31□□□□□ -0.12
RFC4-206ENST00000427785 CTR9Q6PD62 1173 aa14.31□□□□□ -0.12
RFC4-206ENST00000427785 RALYLQ86SE5 291 aaKnown RBP14.31□□□□□ -0.12
RFC4-206ENST00000427785 NKX2-3Q8TAU0 364 aa14.31□□□□□ -0.12
RFC4-206ENST00000427785 ZDHHC15Q96MV8 337 aa14.31□□□□□ -0.12
RFC4-206ENST00000427785 LRRC2Q9BYS8 371 aa14.31□□□□□ -0.12
RFC4-206ENST00000427785 ATP8A2Q9NTI2 1148 aa14.31□□□□□ -0.12
RFC4-206ENST00000427785 MCM9Q9NXL9 1143 aa14.31□□□□□ -0.12
RFC4-206ENST00000427785 ARPP21Q9UBL0 812 aaPredicted RBP14.31□□□□□ -0.12
RFC4-206ENST00000427785 SHTN1A0MZ66 631 aa14.3□□□□□ -0.12
RFC4-206ENST00000427785 LMNB1P20700 586 aa14.3□□□□□ -0.12
RFC4-206ENST00000427785 EIF6P56537 245 aaKnown RBP14.3□□□□□ -0.12
RFC4-206ENST00000427785 HDLBPQ00341 1268 aaKnown RBP14.3□□□□□ -0.12
RFC4-206ENST00000427785 MB21D2Q8IYB1 491 aaPredicted RBP14.3□□□□□ -0.12
RFC4-206ENST00000427785 SPRYD3Q8NCJ5 442 aa14.3□□□□□ -0.12
RFC4-206ENST00000427785 STAG1Q8WVM7 1258 aa14.3□□□□□ -0.12
RFC4-206ENST00000427785 LARP6Q9BRS8 491 aaKnown RBP14.3□□□□□ -0.12
RFC4-206ENST00000427785 DDX4Q9NQI0 724 aaKnown RBP14.3□□□□□ -0.12
RFC4-206ENST00000427785 INCENPQ9NQS7 918 aa14.3□□□□□ -0.12
RFC4-206ENST00000427785 USP40Q9NVE5 1235 aa14.3□□□□□ -0.12
RFC4-206ENST00000427785 MKRN1Q9UHC7 482 aaKnown RBP14.3□□□□□ -0.12
RFC4-206ENST00000427785 SERPINA10Q9UK55 444 aa14.3□□□□□ -0.12
RFC4-206ENST00000427785 GJA3Q9Y6H8 435 aa14.3□□□□□ -0.12
RFC4-206ENST00000427785 GOLGB1Q14789 3259 aaKnown RBP14.3□□□□□ -0.12
RFC4-206ENST00000427785 ROBO3Q96MS0 1386 aa14.3□□□□□ -0.12
RFC4-206ENST00000427785 MYH6P13533 1939 aa14.29□□□□□ -0.12
RFC4-206ENST00000427785 B4E1Z4 1266 aa14.29□□□□□ -0.12
RFC4-206ENST00000427785 FZD9O00144 591 aa14.29□□□□□ -0.12
RFC4-206ENST00000427785 WDHD1O75717 1129 aaPredicted RBP14.29□□□□□ -0.12
RFC4-206ENST00000427785 CACNB3P54284 484 aa14.29□□□□□ -0.12
RFC4-206ENST00000427785 ANTXR2P58335 489 aa14.29□□□□□ -0.12
RFC4-206ENST00000427785 TNIP1Q15025 636 aa14.29□□□□□ -0.12
RFC4-206ENST00000427785 RRP12Q5JTH9 1297 aaKnown RBP14.29□□□□□ -0.12
RFC4-206ENST00000427785 AKNAD1Q5T1N1 836 aa14.29□□□□□ -0.12
RFC4-206ENST00000427785 CHST3Q7LGC8 479 aa14.29□□□□□ -0.12
RFC4-206ENST00000427785 AGBL3Q8NEM8 1001 aa14.29□□□□□ -0.12
RFC4-206ENST00000427785 NCOA7Q8NI08 942 aa14.29□□□□□ -0.12
RFC4-206ENST00000427785 TOMM22Q9NS69 142 aa14.29□□□□□ -0.12
RFC4-206ENST00000427785 HDAC9Q9UKV0 1011 aa14.29□□□□□ -0.12
RFC4-206ENST00000427785 GREB1LQ9C091 1923 aaPredicted RBP14.29□□□□□ -0.12
RFC4-206ENST00000427785 MYH4Q9Y623 1939 aa14.29□□□□□ -0.12
RFC4-206ENST00000427785 LARGE1O95461 756 aa14.28□□□□□ -0.12
RFC4-206ENST00000427785 POLR2AP24928 1970 aaKnown RBP14.28□□□□□ -0.12
RFC4-206ENST00000427785 GMPSP49915 693 aaPredicted RBP14.28□□□□□ -0.12
RFC4-206ENST00000427785 NFIAQ12857 509 aa14.28□□□□□ -0.12
RFC4-206ENST00000427785 TRDNQ13061 729 aa14.28□□□□□ -0.12
RFC4-206ENST00000427785 TOB2Q14106 344 aaPredicted RBP14.28□□□□□ -0.12
RFC4-206ENST00000427785 ATAD5Q96QE3 1844 aa14.28□□□□□ -0.12
RFC4-206ENST00000427785 FOXD4L1Q9NU39 408 aa14.28□□□□□ -0.12
RFC4-206ENST00000427785 RNF181Q9P0P0 153 aa14.28□□□□□ -0.12
RFC4-206ENST00000427785 ANAPC4Q9UJX5 808 aa14.28□□□□□ -0.12
RFC4-206ENST00000427785 PRC1O43663 620 aa14.27□□□□□ -0.13
RFC4-206ENST00000427785 HMGB1P09429 215 aaKnown RBP14.27□□□□□ -0.13
RFC4-206ENST00000427785 SBK1Q52WX2 424 aa14.27□□□□□ -0.13
RFC4-206ENST00000427785 MFSD6Q6ZSS7 791 aa14.27□□□□□ -0.13
RFC4-206ENST00000427785 Q6ZUG5 572 aa14.27□□□□□ -0.13
RFC4-206ENST00000427785 CYB5R4Q7L1T6 521 aa14.27□□□□□ -0.13
RFC4-206ENST00000427785 DHX32Q7L7V1 743 aaKnown RBP14.27□□□□□ -0.13
RFC4-206ENST00000427785 AMOTL1Q8IY63 956 aa14.27□□□□□ -0.13
RFC4-206ENST00000427785 TMX3Q96JJ7 454 aa14.27□□□□□ -0.13
RFC4-206ENST00000427785 MRIQ9BWK5 157 aa14.27□□□□□ -0.13
RFC4-206ENST00000427785 RNF41Q9H4P4 317 aaPredicted RBP14.27□□□□□ -0.13
RFC4-206ENST00000427785 TDRD3Q9H7E2 651 aaKnown RBP14.27□□□□□ -0.13
RFC4-206ENST00000427785 CLRN2A0PK11 232 aa14.26□□□□□ -0.13
RFC4-206ENST00000427785 SPDYE2BA6NHP3 402 aa14.26□□□□□ -0.13
RFC4-206ENST00000427785 KDM4AO75164 1064 aa14.26□□□□□ -0.13
RFC4-206ENST00000427785 PRDM1O75626 825 aa14.26□□□□□ -0.13
RFC4-206ENST00000427785 POLR3DP05423 398 aaPredicted RBP14.26□□□□□ -0.13
RFC4-206ENST00000427785 SPDYE6P0CI01 402 aa14.26□□□□□ -0.13
RFC4-206ENST00000427785 MCM2P49736 904 aa14.26□□□□□ -0.13
RFC4-206ENST00000427785 FGD1P98174 961 aa14.26□□□□□ -0.13
RFC4-206ENST00000427785 EXOSC10Q01780 885 aaKnown RBP14.26□□□□□ -0.13
RFC4-206ENST00000427785 DLGAP5Q15398 846 aa14.26□□□□□ -0.13
RFC4-206ENST00000427785 C12orf60Q5U649 245 aa14.26□□□□□ -0.13
RFC4-206ENST00000427785 OGFOD1Q8N543 542 aa14.26□□□□□ -0.13
RFC4-206ENST00000427785 SLC44A5Q8NCS7 719 aa14.26□□□□□ -0.13
RFC4-206ENST00000427785 DYNLL2Q96FJ2 89 aa14.26□□□□□ -0.13
RFC4-206ENST00000427785 PRMT6Q96LA8 375 aaPredicted RBP14.26□□□□□ -0.13
RFC4-206ENST00000427785 OSBPL5Q9H0X9 879 aaPredicted RBP14.26□□□□□ -0.13
RFC4-206ENST00000427785 CNNM2Q9H8M5 875 aa14.26□□□□□ -0.13
RFC4-206ENST00000427785 GPHNQ9NQX3 736 aaPredicted RBP14.26□□□□□ -0.13
RFC4-206ENST00000427785 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.26□□□□□ -0.13
RFC4-206ENST00000427785 HSP90AA1P07900 732 aaKnown RBP14.25□□□□□ -0.13
RFC4-206ENST00000427785 RPS12P25398 132 aaKnown RBP14.25□□□□□ -0.13
RFC4-206ENST00000427785 MCM5P33992 734 aa14.25□□□□□ -0.13
RFC4-206ENST00000427785 PLCD1P51178 756 aa14.25□□□□□ -0.13
RFC4-206ENST00000427785 TCP10Q12799 353 aa14.25□□□□□ -0.13
RFC4-206ENST00000427785 GPR162Q16538 588 aa14.25□□□□□ -0.13
RFC4-206ENST00000427785 MICALL2Q8IY33 904 aa14.25□□□□□ -0.13
RFC4-206ENST00000427785 BRF1Q92994 677 aa14.25□□□□□ -0.13
RFC4-206ENST00000427785 KRT23Q9C075 422 aa14.25□□□□□ -0.13
RFC4-206ENST00000427785 SLKQ9H2G2 1235 aaPredicted RBP14.25□□□□□ -0.13
RFC4-206ENST00000427785 FAM198AQ9UFP1 575 aa14.25□□□□□ -0.13
RFC4-206ENST00000427785 COL2A1P02458 1487 aaPredicted RBP14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms