RNA–Protein interactions for RNA: ENST00000415788.2

SGCE-202, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-202ENST00000415788 CLEC11AQ9Y240 323 aa17.31■□□□□ 0.36
SGCE-202ENST00000415788 PPP2R3BQ9Y5P8 575 aa17.31■□□□□ 0.36
SGCE-202ENST00000415788 SLC4A4Q9Y6R1 1079 aa17.31■□□□□ 0.36
SGCE-202ENST00000415788 ASTN2O75129 1339 aaPredicted RBP17.31■□□□□ 0.36
SGCE-202ENST00000415788 GOLGA6L3A6NEY3 463 aa17.31■□□□□ 0.36
SGCE-202ENST00000415788 USP5P45974 858 aa17.31■□□□□ 0.36
SGCE-202ENST00000415788 GIMAP6Q6P9H5 292 aa17.31■□□□□ 0.36
SGCE-202ENST00000415788 SULF1Q8IWU6 871 aa17.31■□□□□ 0.36
SGCE-202ENST00000415788 TGFBRAP1Q8WUH2 860 aa17.31■□□□□ 0.36
SGCE-202ENST00000415788 ESYT1Q9BSJ8 1104 aa17.31■□□□□ 0.36
SGCE-202ENST00000415788 FSD2A1L4K1 749 aa17.3■□□□□ 0.36
SGCE-202ENST00000415788 KIF3CO14782 793 aa17.3■□□□□ 0.36
SGCE-202ENST00000415788 CACNB3P54284 484 aa17.3■□□□□ 0.36
SGCE-202ENST00000415788 NFIAQ12857 509 aa17.3■□□□□ 0.36
SGCE-202ENST00000415788 CCDC129Q6ZRS4 1044 aa17.3■□□□□ 0.36
SGCE-202ENST00000415788 ZNF589Q86UQ0 364 aaPredicted RBP17.3■□□□□ 0.36
SGCE-202ENST00000415788 NACAP1Q9BZK3 213 aa17.3■□□□□ 0.36
SGCE-202ENST00000415788 FLT1P17948 1338 aa17.29■□□□□ 0.36
SGCE-202ENST00000415788 TCP10L2B9ZVM9 353 aa17.29■□□□□ 0.36
SGCE-202ENST00000415788 PATL2C9JE40 543 aaKnown RBP17.29■□□□□ 0.36
SGCE-202ENST00000415788 PICALMQ13492 652 aa17.29■□□□□ 0.36
SGCE-202ENST00000415788 CDC37L1Q7L3B6 337 aa17.29■□□□□ 0.36
SGCE-202ENST00000415788 FAM151AQ8WW52 585 aa17.29■□□□□ 0.36
SGCE-202ENST00000415788 FAM198AQ9UFP1 575 aa17.29■□□□□ 0.36
SGCE-202ENST00000415788 ECM29Q5VYK3 1845 aa17.29■□□□□ 0.36
SGCE-202ENST00000415788 POTEIP0CG38 1075 aa17.29■□□□□ 0.36
SGCE-202ENST00000415788 POTEJP0CG39 1038 aa17.29■□□□□ 0.36
SGCE-202ENST00000415788 KIAA1211Q6ZU35 1233 aa17.29■□□□□ 0.36
SGCE-202ENST00000415788 KRT26Q7Z3Y9 468 aa17.29■□□□□ 0.36
SGCE-202ENST00000415788 SDR42E1Q8WUS8 393 aa17.29■□□□□ 0.36
SGCE-202ENST00000415788 OSBPL5Q9H0X9 879 aaPredicted RBP17.29■□□□□ 0.36
SGCE-202ENST00000415788 DEFB129Q9H1M3 183 aa17.29■□□□□ 0.36
SGCE-202ENST00000415788 DCP1AQ9NPI6 582 aaPredicted RBP17.29■□□□□ 0.36
SGCE-202ENST00000415788 ISY1Q9ULR0 285 aaKnown RBP17.29■□□□□ 0.36
SGCE-202ENST00000415788 COL2A1P02458 1487 aaPredicted RBP17.28■□□□□ 0.36
SGCE-202ENST00000415788 GSG1L2A8MUP6 293 aa17.28■□□□□ 0.36
SGCE-202ENST00000415788 PRKAB2O43741 272 aa17.28■□□□□ 0.36
SGCE-202ENST00000415788 APPP05067 770 aa17.28■□□□□ 0.36
SGCE-202ENST00000415788 MCM4P33991 863 aa17.28■□□□□ 0.36
SGCE-202ENST00000415788 RASA3Q14644 834 aa17.28■□□□□ 0.36
SGCE-202ENST00000415788 MAPKAPK5Q8IW41 473 aa17.28■□□□□ 0.36
SGCE-202ENST00000415788 DSCC1Q9BVC3 393 aa17.28■□□□□ 0.36
SGCE-202ENST00000415788 DHX36Q9H2U1 1008 aaKnown RBP17.28■□□□□ 0.36
SGCE-202ENST00000415788 DDX4Q9NQI0 724 aaKnown RBP17.28■□□□□ 0.36
SGCE-202ENST00000415788 RRAGDQ9NQL2 400 aaPredicted RBP17.28■□□□□ 0.36
SGCE-202ENST00000415788 CHMP5Q9NZZ3 219 aa17.28■□□□□ 0.36
SGCE-202ENST00000415788 MKRN1Q9UHC7 482 aaKnown RBP17.28■□□□□ 0.36
SGCE-202ENST00000415788 HSPD1P10809 573 aaKnown RBP17.27■□□□□ 0.36
SGCE-202ENST00000415788 CHADLQ6NUI6 762 aa17.27■□□□□ 0.36
SGCE-202ENST00000415788 AMOTL1Q8IY63 956 aa17.27■□□□□ 0.36
SGCE-202ENST00000415788 IL25Q9H293 177 aa17.27■□□□□ 0.36
SGCE-202ENST00000415788 CNTNAP1P78357 1384 aa17.27■□□□□ 0.36
SGCE-202ENST00000415788 TCP10Q12799 353 aa17.27■□□□□ 0.35
SGCE-202ENST00000415788 IFNL3Q8IZI9 196 aa17.27■□□□□ 0.35
SGCE-202ENST00000415788 ATRNL1Q5VV63 1379 aa17.26■□□□□ 0.35
SGCE-202ENST00000415788 ZMYM6O95789 1325 aa17.26■□□□□ 0.35
SGCE-202ENST00000415788 TOMM70O94826 608 aa17.26■□□□□ 0.35
SGCE-202ENST00000415788 REC8O95072 547 aa17.26■□□□□ 0.35
SGCE-202ENST00000415788 ALX1Q15699 326 aa17.26■□□□□ 0.35
SGCE-202ENST00000415788 HOOK2Q96ED9 719 aa17.26■□□□□ 0.35
SGCE-202ENST00000415788 NAPBQ9H115 298 aa17.26■□□□□ 0.35
SGCE-202ENST00000415788 MCM9Q9NXL9 1143 aa17.26■□□□□ 0.35
SGCE-202ENST00000415788 ARPP21Q9UBL0 812 aaPredicted RBP17.26■□□□□ 0.35
SGCE-202ENST00000415788 TDO2P48775 406 aa17.25■□□□□ 0.35
SGCE-202ENST00000415788 VPS53Q5VIR6 699 aa17.25■□□□□ 0.35
SGCE-202ENST00000415788 MAP1SQ66K74 1059 aaPredicted RBP17.25■□□□□ 0.35
SGCE-202ENST00000415788 ZSCAN29Q8IWY8 852 aaPredicted RBP17.25■□□□□ 0.35
SGCE-202ENST00000415788 SMC1BQ8NDV3 1235 aa17.25■□□□□ 0.35
SGCE-202ENST00000415788 RBM46Q8TBY0 533 aaKnown RBP17.25■□□□□ 0.35
SGCE-202ENST00000415788 TMEM39BQ9GZU3 492 aa17.25■□□□□ 0.35
SGCE-202ENST00000415788 EPB41L4AQ9HCS5 686 aaPredicted RBP17.25■□□□□ 0.35
SGCE-202ENST00000415788 CLCN1P35523 988 aa17.24■□□□□ 0.35
SGCE-202ENST00000415788 TTC6Q86TZ1 520 aa17.24■□□□□ 0.35
SGCE-202ENST00000415788 USP48Q86UV5 1035 aa17.24■□□□□ 0.35
SGCE-202ENST00000415788 ANO2Q9NQ90 1003 aa17.24■□□□□ 0.35
SGCE-202ENST00000415788 CTNNA3Q9UI47 895 aa17.24■□□□□ 0.35
SGCE-202ENST00000415788 TAOK2Q9UL54 1235 aa17.24■□□□□ 0.35
SGCE-202ENST00000415788 ADM5C9JUS6 153 aa17.24■□□□□ 0.35
SGCE-202ENST00000415788 FOXP2O15409 715 aa17.24■□□□□ 0.35
SGCE-202ENST00000415788 EPB41L2O43491 1005 aaKnown RBP17.24■□□□□ 0.35
SGCE-202ENST00000415788 POLR3DP05423 398 aaPredicted RBP17.24■□□□□ 0.35
SGCE-202ENST00000415788 HLA-DOAP06340 250 aa17.24■□□□□ 0.35
SGCE-202ENST00000415788 XRCC6P12956 609 aaKnown RBP eCLIP17.24■□□□□ 0.35
SGCE-202ENST00000415788 SUPT20HL1Q3ZLR7 823 aa17.24■□□□□ 0.35
SGCE-202ENST00000415788 SBK1Q52WX2 424 aa17.24■□□□□ 0.35
SGCE-202ENST00000415788 TEPSINQ96N21 525 aa17.24■□□□□ 0.35
SGCE-202ENST00000415788 MRE11P49959 708 aa17.23■□□□□ 0.35
SGCE-202ENST00000415788 ZFPM1Q8IX07 1006 aa17.23■□□□□ 0.35
SGCE-202ENST00000415788 CSRNP1Q96S65 589 aa17.23■□□□□ 0.35
SGCE-202ENST00000415788 GLIS2Q9BZE0 524 aaPredicted RBP17.23■□□□□ 0.35
SGCE-202ENST00000415788 PI4KBQ9UBF8 816 aa17.23■□□□□ 0.35
SGCE-202ENST00000415788 PALD1Q9ULE6 856 aa17.23■□□□□ 0.35
SGCE-202ENST00000415788 FOCADQ5VW36 1801 aa17.23■□□□□ 0.35
SGCE-202ENST00000415788 DDX11L8A8MPP1 907 aa17.22■□□□□ 0.35
SGCE-202ENST00000415788 USP17L12C9JPN9 530 aa17.22■□□□□ 0.35
SGCE-202ENST00000415788 USP17L21D6R901 530 aa17.22■□□□□ 0.35
SGCE-202ENST00000415788 FGAP02671 866 aa17.22■□□□□ 0.35
SGCE-202ENST00000415788 CTR9Q6PD62 1173 aa17.22■□□□□ 0.35
SGCE-202ENST00000415788 MAP4K1Q92918 833 aa17.22■□□□□ 0.35
SGCE-202ENST00000415788 LSG1Q9H089 658 aaKnown RBP17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms