RNA–Protein interactions for RNA: ENST00000414411.3

DDB1-202, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,904 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-202ENST00000414411 CERS3Q8IU89 383 aa11.85□□□□□ -0.51
DDB1-202ENST00000414411 BBXQ8WY36 941 aaPredicted RBP11.85□□□□□ -0.51
DDB1-202ENST00000414411 GBP4Q96PP9 640 aa11.85□□□□□ -0.51
DDB1-202ENST00000414411 CCDC171Q6TFL3 1326 aa11.85□□□□□ -0.51
DDB1-202ENST00000414411 WDR90Q96KV7 1748 aa11.85□□□□□ -0.51
DDB1-202ENST00000414411 SCN4AP35499 1836 aa11.85□□□□□ -0.51
DDB1-202ENST00000414411 RBM5P52756 815 aaKnown RBP eCLIP11.84□□□□□ -0.51
DDB1-202ENST00000414411 HIRAP54198 1017 aaPredicted RBP11.84□□□□□ -0.51
DDB1-202ENST00000414411 NBPF9Q3BBW0 867 aa11.84□□□□□ -0.51
DDB1-202ENST00000414411 SH3RF3Q8TEJ3 882 aaPredicted RBP11.84□□□□□ -0.51
DDB1-202ENST00000414411 BRPF3Q9ULD4 1205 aa11.84□□□□□ -0.51
DDB1-202ENST00000414411 CDK5RAP2Q96SN8 1893 aa11.84□□□□□ -0.51
DDB1-202ENST00000414411 GSG1L2A8MUP6 293 aa11.84□□□□□ -0.51
DDB1-202ENST00000414411 PRKAB2O43741 272 aa11.84□□□□□ -0.51
DDB1-202ENST00000414411 HSPD1P10809 573 aaKnown RBP11.84□□□□□ -0.51
DDB1-202ENST00000414411 PLCG2P16885 1265 aa11.84□□□□□ -0.51
DDB1-202ENST00000414411 TBC1D10BQ4KMP7 808 aaPredicted RBP11.84□□□□□ -0.51
DDB1-202ENST00000414411 VPS53Q5VIR6 699 aa11.84□□□□□ -0.51
DDB1-202ENST00000414411 NOL10Q9BSC4 688 aaKnown RBP11.84□□□□□ -0.51
DDB1-202ENST00000414411 TDRD3Q9H7E2 651 aaKnown RBP11.84□□□□□ -0.51
DDB1-202ENST00000414411 ADARB2Q9NS39 739 aaKnown RBP11.84□□□□□ -0.51
DDB1-202ENST00000414411 USP40Q9NVE5 1235 aa11.84□□□□□ -0.51
DDB1-202ENST00000414411 MKRN1Q9UHC7 482 aaKnown RBP11.84□□□□□ -0.51
DDB1-202ENST00000414411 WDHD1O75717 1129 aaPredicted RBP11.83□□□□□ -0.52
DDB1-202ENST00000414411 GNAT2P19087 354 aa11.83□□□□□ -0.52
DDB1-202ENST00000414411 LMOD1P29536 600 aaPredicted RBP11.83□□□□□ -0.52
DDB1-202ENST00000414411 PTH1RQ03431 593 aa11.83□□□□□ -0.52
DDB1-202ENST00000414411 KIF4BQ2VIQ3 1234 aa11.83□□□□□ -0.52
DDB1-202ENST00000414411 RBM26Q5T8P6 1007 aaKnown RBP11.83□□□□□ -0.52
DDB1-202ENST00000414411 IL27Q8NEV9 243 aa11.83□□□□□ -0.52
DDB1-202ENST00000414411 TRPM4Q8TD43 1214 aa11.83□□□□□ -0.52
DDB1-202ENST00000414411 UBE2Q2Q8WVN8 375 aa11.83□□□□□ -0.52
DDB1-202ENST00000414411 IDI2Q9BXS1 227 aa11.83□□□□□ -0.52
DDB1-202ENST00000414411 LSG1Q9H089 658 aaKnown RBP11.83□□□□□ -0.52
DDB1-202ENST00000414411 HACL1Q9UJ83 578 aa11.83□□□□□ -0.52
DDB1-202ENST00000414411 ECM29Q5VYK3 1845 aa11.83□□□□□ -0.52
DDB1-202ENST00000414411 PATL2C9JE40 543 aaKnown RBP11.82□□□□□ -0.52
DDB1-202ENST00000414411 HMGB1P09429 215 aaKnown RBP11.82□□□□□ -0.52
DDB1-202ENST00000414411 CLEC17AQ6ZS10 378 aa11.82□□□□□ -0.52
DDB1-202ENST00000414411 MAP4K1Q92918 833 aa11.82□□□□□ -0.52
DDB1-202ENST00000414411 CRNKL1Q9BZJ0 848 aaKnown RBP11.82□□□□□ -0.52
DDB1-202ENST00000414411 ZNF70Q9UC06 446 aaPredicted RBP11.82□□□□□ -0.52
DDB1-202ENST00000414411 SLC4A4Q9Y6R1 1079 aa11.82□□□□□ -0.52
DDB1-202ENST00000414411 POLR2AP24928 1970 aaKnown RBP11.82□□□□□ -0.52
DDB1-202ENST00000414411 FOCADQ5VW36 1801 aa11.82□□□□□ -0.52
DDB1-202ENST00000414411 RPAP1Q9BWH6 1393 aaPredicted RBP11.82□□□□□ -0.52
DDB1-202ENST00000414411 IQCA1LA6NCM1 817 aa11.82□□□□□ -0.52
DDB1-202ENST00000414411 NFIAQ12857 509 aa11.82□□□□□ -0.52
DDB1-202ENST00000414411 ALX1Q15699 326 aa11.82□□□□□ -0.52
DDB1-202ENST00000414411 L1TD1Q5T7N2 865 aaKnown RBP11.82□□□□□ -0.52
DDB1-202ENST00000414411 FKBP1CQ5VVH2 108 aa11.82□□□□□ -0.52
DDB1-202ENST00000414411 GIMAP6Q6P9H5 292 aa11.82□□□□□ -0.52
DDB1-202ENST00000414411 TEX11Q8IYF3 940 aa11.82□□□□□ -0.52
DDB1-202ENST00000414411 SDR42E1Q8WUS8 393 aa11.82□□□□□ -0.52
DDB1-202ENST00000414411 DSCC1Q9BVC3 393 aa11.82□□□□□ -0.52
DDB1-202ENST00000414411 TAF1DQ9H5J8 278 aaPredicted RBP11.82□□□□□ -0.52
DDB1-202ENST00000414411 ATP8A2Q9NTI2 1148 aa11.82□□□□□ -0.52
DDB1-202ENST00000414411 ASTN2O75129 1339 aaPredicted RBP11.81□□□□□ -0.52
DDB1-202ENST00000414411 EPB41L2O43491 1005 aaKnown RBP11.81□□□□□ -0.52
DDB1-202ENST00000414411 PTMSP20962 102 aa11.81□□□□□ -0.52
DDB1-202ENST00000414411 MCCP23508 829 aa11.81□□□□□ -0.52
DDB1-202ENST00000414411 EPHX2P34913 555 aa11.81□□□□□ -0.52
DDB1-202ENST00000414411 ANAPC15P60006 121 aa11.81□□□□□ -0.52
DDB1-202ENST00000414411 KIAA1211Q6ZU35 1233 aa11.81□□□□□ -0.52
DDB1-202ENST00000414411 USP50Q70EL3 339 aaPredicted RBP11.81□□□□□ -0.52
DDB1-202ENST00000414411 IFNL3Q8IZI9 196 aa11.81□□□□□ -0.52
DDB1-202ENST00000414411 IL17RAQ96F46 866 aa11.81□□□□□ -0.52
DDB1-202ENST00000414411 EPB41L4AQ9HCS5 686 aaPredicted RBP11.81□□□□□ -0.52
DDB1-202ENST00000414411 DCP1AQ9NPI6 582 aaPredicted RBP11.81□□□□□ -0.52
DDB1-202ENST00000414411 ANO2Q9NQ90 1003 aa11.81□□□□□ -0.52
DDB1-202ENST00000414411 DDX4Q9NQI0 724 aaKnown RBP11.81□□□□□ -0.52
DDB1-202ENST00000414411 FAM198AQ9UFP1 575 aa11.81□□□□□ -0.52
DDB1-202ENST00000414411 FSD2A1L4K1 749 aa11.8□□□□□ -0.52
DDB1-202ENST00000414411 MYO1BO43795 1136 aa11.8□□□□□ -0.52
DDB1-202ENST00000414411 FGAP02671 866 aa11.8□□□□□ -0.52
DDB1-202ENST00000414411 VEGFAP15692 232 aaPredicted RBP11.8□□□□□ -0.52
DDB1-202ENST00000414411 CACNB3P54284 484 aa11.8□□□□□ -0.52
DDB1-202ENST00000414411 TGFBRAP1Q8WUH2 860 aa11.8□□□□□ -0.52
DDB1-202ENST00000414411 GZF1Q9H116 711 aaPredicted RBP11.8□□□□□ -0.52
DDB1-202ENST00000414411 CWC22Q9HCG8 908 aaKnown RBP11.8□□□□□ -0.52
DDB1-202ENST00000414411 PGAP2Q9UHJ9 254 aa11.8□□□□□ -0.52
DDB1-202ENST00000414411 BAZ2AQ9UIF9 1905 aaKnown RBP11.8□□□□□ -0.52
DDB1-202ENST00000414411 CLRN2A0PK11 232 aa11.8□□□□□ -0.52
DDB1-202ENST00000414411 NUCB2P80303 420 aa11.8□□□□□ -0.52
DDB1-202ENST00000414411 RRAGCQ9HB90 399 aa11.8□□□□□ -0.52
DDB1-202ENST00000414411 PALD1Q9ULE6 856 aa11.8□□□□□ -0.52
DDB1-202ENST00000414411 ZMYM6O95789 1325 aa11.79□□□□□ -0.52
DDB1-202ENST00000414411 FLT1P17948 1338 aa11.79□□□□□ -0.52
DDB1-202ENST00000414411 ENTPD3O75355 529 aa11.79□□□□□ -0.52
DDB1-202ENST00000414411 APPP05067 770 aa11.79□□□□□ -0.52
DDB1-202ENST00000414411 USP5P45974 858 aa11.79□□□□□ -0.52
DDB1-202ENST00000414411 NECTIN1Q15223 517 aa11.79□□□□□ -0.52
DDB1-202ENST00000414411 FAM83AQ86UY5 434 aa11.79□□□□□ -0.52
DDB1-202ENST00000414411 PNMA8AQ86V59 439 aaPredicted RBP11.79□□□□□ -0.52
DDB1-202ENST00000414411 MAPKAPK5Q8IW41 473 aa11.79□□□□□ -0.52
DDB1-202ENST00000414411 ZFPM1Q8IX07 1006 aa11.79□□□□□ -0.52
DDB1-202ENST00000414411 ZC3H15Q8WU90 426 aaKnown RBP11.79□□□□□ -0.52
DDB1-202ENST00000414411 CNTNAP1P78357 1384 aa11.79□□□□□ -0.52
DDB1-202ENST00000414411 MYH1P12882 1939 aa11.78□□□□□ -0.52
DDB1-202ENST00000414411 GOLGA6L3A6NEY3 463 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms