RNA–Protein interactions for RNA: ENST00000411792.1

RFC4-203, Transcript of replication factor C subunit 4, humanhuman

TSL 5

Gene RFC4, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-203ENST00000411792 ZBTB48P10074 688 aaPredicted RBP22.18■■□□□ 1.14
RFC4-203ENST00000411792 ATP5JP18859 108 aa22.18■■□□□ 1.14
RFC4-203ENST00000411792 RHBDL3P58872 404 aa22.18■■□□□ 1.14
RFC4-203ENST00000411792 MIGA2Q7L4E1 593 aa22.18■■□□□ 1.14
RFC4-203ENST00000411792 CERS3Q8IU89 383 aa22.18■■□□□ 1.14
RFC4-203ENST00000411792 MAGEB6Q8N7X4 407 aa22.18■■□□□ 1.14
RFC4-203ENST00000411792 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.18■■□□□ 1.14
RFC4-203ENST00000411792 WNK4Q96J92 1243 aa22.18■■□□□ 1.14
RFC4-203ENST00000411792 BOLA2Q9H3K6 86 aa22.18■■□□□ 1.14
RFC4-203ENST00000411792 ANTXR1Q9H6X2 564 aa22.18■■□□□ 1.14
RFC4-203ENST00000411792 RFX7Q2KHR2 1363 aa22.17■■□□□ 1.14
RFC4-203ENST00000411792 GOLIM4O00461 696 aa22.17■■□□□ 1.14
RFC4-203ENST00000411792 NPM3O75607 178 aaKnown RBP22.17■■□□□ 1.14
RFC4-203ENST00000411792 VGLL4Q14135 290 aa22.17■■□□□ 1.14
RFC4-203ENST00000411792 ELP3Q9H9T3 547 aa22.17■■□□□ 1.14
RFC4-203ENST00000411792 CASP8AP2Q9UKL3 1982 aa22.17■■□□□ 1.14
RFC4-203ENST00000411792 ZFPM1Q8IX07 1006 aa22.16■■□□□ 1.14
RFC4-203ENST00000411792 SH3RF3Q8TEJ3 882 aaPredicted RBP22.16■■□□□ 1.14
RFC4-203ENST00000411792 ECHDC1Q9NTX5 307 aa22.16■■□□□ 1.14
RFC4-203ENST00000411792 PAG1Q9NWQ8 432 aa22.16■■□□□ 1.14
RFC4-203ENST00000411792 MANSC4A6NHS7 340 aaPredicted RBP22.15■■□□□ 1.14
RFC4-203ENST00000411792 PPP4CP60510 307 aa22.15■■□□□ 1.14
RFC4-203ENST00000411792 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.15■■□□□ 1.14
RFC4-203ENST00000411792 GCC1Q96CN9 775 aa22.15■■□□□ 1.14
RFC4-203ENST00000411792 OPTNQ96CV9 577 aa22.15■■□□□ 1.14
RFC4-203ENST00000411792 HAUS7Q99871 368 aa22.15■■□□□ 1.14
RFC4-203ENST00000411792 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.15■■□□□ 1.144e-12■□□□□ 9.8
RFC4-203ENST00000411792 DDX4Q9NQI0 724 aaKnown RBP22.15■■□□□ 1.14
RFC4-203ENST00000411792 HDAC1Q13547 482 aaPredicted RBP22.14■■□□□ 1.13
RFC4-203ENST00000411792 ADGRA1Q86SQ6 560 aa22.14■■□□□ 1.13
RFC4-203ENST00000411792 SLC9C2Q5TAH2 1124 aa22.13■■□□□ 1.13
RFC4-203ENST00000411792 MIGA1Q8NAN2 632 aa22.13■■□□□ 1.13
RFC4-203ENST00000411792 EXOC6Q8TAG9 804 aa22.13■■□□□ 1.13
RFC4-203ENST00000411792 OSBPL5Q9H0X9 879 aaPredicted RBP22.13■■□□□ 1.13
RFC4-203ENST00000411792 AK9Q5TCS8 1911 aa22.13■■□□□ 1.13
RFC4-203ENST00000411792 TM4SF4P48230 202 aa22.12■■□□□ 1.13
RFC4-203ENST00000411792 INHBEP58166 350 aa22.12■■□□□ 1.13
RFC4-203ENST00000411792 TGFBRAP1Q8WUH2 860 aa22.12■■□□□ 1.13
RFC4-203ENST00000411792 RWDD1Q9H446 243 aaPredicted RBP22.12■■□□□ 1.13
RFC4-203ENST00000411792 ATRNL1Q5VV63 1379 aa22.12■■□□□ 1.13
RFC4-203ENST00000411792 DDTLA6NHG4 134 aaPredicted RBP22.11■■□□□ 1.13
RFC4-203ENST00000411792 TBC1D8O95759 1140 aa22.11■■□□□ 1.13
RFC4-203ENST00000411792 PDE6AP16499 860 aa22.11■■□□□ 1.13
RFC4-203ENST00000411792 USP5P45974 858 aa22.11■■□□□ 1.13
RFC4-203ENST00000411792 ANKRD45Q5TZF3 282 aa22.11■■□□□ 1.13
RFC4-203ENST00000411792 SH3BP5LQ7L8J4 393 aa22.11■■□□□ 1.13
RFC4-203ENST00000411792 ERO1BQ86YB8 467 aa22.11■■□□□ 1.13
RFC4-203ENST00000411792 ZKSCAN4Q969J2 545 aaPredicted RBP22.11■■□□□ 1.13
RFC4-203ENST00000411792 EDC3Q96F86 508 aaKnown RBP22.11■■□□□ 1.13
RFC4-203ENST00000411792 OTUD5Q96G74 571 aa22.11■■□□□ 1.13
RFC4-203ENST00000411792 COL2A1P02458 1487 aaPredicted RBP22.1■■□□□ 1.13
RFC4-203ENST00000411792 SPDYE5A6NIY4 337 aa22.1■■□□□ 1.13
RFC4-203ENST00000411792 ERC2O15083 957 aa22.1■■□□□ 1.13
RFC4-203ENST00000411792 INPP5BP32019 993 aa22.1■■□□□ 1.13
RFC4-203ENST00000411792 DYNLL1P63167 89 aaKnown RBP22.1■■□□□ 1.13
RFC4-203ENST00000411792 OTUD7BQ6GQQ9 843 aa22.1■■□□□ 1.13
RFC4-203ENST00000411792 MAPKAPK5Q8IW41 473 aa22.1■■□□□ 1.13
RFC4-203ENST00000411792 DHX36Q9H2U1 1008 aaKnown RBP22.1■■□□□ 1.13
RFC4-203ENST00000411792 ZNF112Q9UJU3 913 aa22.1■■□□□ 1.13
RFC4-203ENST00000411792 SNCAIPQ9Y6H5 919 aa22.1■■□□□ 1.13
RFC4-203ENST00000411792 FLT1P17948 1338 aa22.09■■□□□ 1.13
RFC4-203ENST00000411792 ZNF532Q9HCE3 1301 aa22.09■■□□□ 1.13
RFC4-203ENST00000411792 MAGEB6P1A0A0J9YX57 407 aa22.09■■□□□ 1.13
RFC4-203ENST00000411792 ALDH1A1P00352 501 aa22.09■■□□□ 1.13
RFC4-203ENST00000411792 GTF2A2P52657 109 aa22.09■■□□□ 1.13
RFC4-203ENST00000411792 DGKZQ13574 1117 aa22.09■■□□□ 1.13
RFC4-203ENST00000411792 ZSCAN25Q6NSZ9 544 aa22.09■■□□□ 1.13
RFC4-203ENST00000411792 TRIM34Q9BYJ4 488 aa22.09■■□□□ 1.13
RFC4-203ENST00000411792 PICK1Q9NRD5 415 aa22.09■■□□□ 1.13
RFC4-203ENST00000411792 OTOFQ9HC10 1997 aa22.08■■□□□ 1.13
RFC4-203ENST00000411792 TTC41PQ6P2S7 1318 aa22.08■■□□□ 1.13
RFC4-203ENST00000411792 GJA5P36382 358 aa22.08■■□□□ 1.13
RFC4-203ENST00000411792 CNKSR2Q8WXI2 1034 aa22.08■■□□□ 1.13
RFC4-203ENST00000411792 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.08■■□□□ 1.13
RFC4-203ENST00000411792 PI4KBQ9UBF8 816 aa22.08■■□□□ 1.13
RFC4-203ENST00000411792 TBC1D12O60347 775 aa22.07■■□□□ 1.12
RFC4-203ENST00000411792 HLA-DOAP06340 250 aa22.07■■□□□ 1.12
RFC4-203ENST00000411792 NOL9Q5SY16 702 aaKnown RBP22.07■■□□□ 1.12
RFC4-203ENST00000411792 TSHZ3Q63HK5 1081 aa22.07■■□□□ 1.12
RFC4-203ENST00000411792 ABHD8Q96I13 439 aa22.07■■□□□ 1.12
RFC4-203ENST00000411792 CRNKL1Q9BZJ0 848 aaKnown RBP22.07■■□□□ 1.12
RFC4-203ENST00000411792 DOCK2Q92608 1830 aa22.06■■□□□ 1.12
RFC4-203ENST00000411792 MX1P20591 662 aa22.06■■□□□ 1.12
RFC4-203ENST00000411792 PPATQ06203 517 aa22.06■■□□□ 1.12
RFC4-203ENST00000411792 PPIL2Q13356 520 aa22.06■■□□□ 1.12
RFC4-203ENST00000411792 IFNL1Q8IU54 200 aa22.06■■□□□ 1.12
RFC4-203ENST00000411792 SCYL3Q8IZE3 742 aa22.06■■□□□ 1.12
RFC4-203ENST00000411792 CRACR2BQ8N4Y2 399 aaPredicted RBP22.06■■□□□ 1.12
RFC4-203ENST00000411792 MCOLN1Q9GZU1 580 aa22.06■■□□□ 1.12
RFC4-203ENST00000411792 HERC5Q9UII4 1024 aaKnown RBP22.06■■□□□ 1.12
RFC4-203ENST00000411792 GLRX3O76003 335 aaKnown RBP22.05■■□□□ 1.12
RFC4-203ENST00000411792 ADD2P35612 726 aa22.05■■□□□ 1.12
RFC4-203ENST00000411792 MAP3K10Q02779 954 aa22.05■■□□□ 1.12
RFC4-203ENST00000411792 SNAPC2Q13487 334 aa22.05■■□□□ 1.12
RFC4-203ENST00000411792 LRRFIP1Q32MZ4 808 aaKnown RBP22.05■■□□□ 1.12
RFC4-203ENST00000411792 SAP30BPQ9UHR5 308 aaKnown RBP22.05■■□□□ 1.12
RFC4-203ENST00000411792 CCL15-CCL14A0A0B4J2E2 113 aa22.04■■□□□ 1.12
RFC4-203ENST00000411792 PHF20L1A8MW92 1017 aa22.04■■□□□ 1.12
RFC4-203ENST00000411792 CTNND1O60716 968 aaKnown RBP22.04■■□□□ 1.12
RFC4-203ENST00000411792 CETPP11597 493 aa22.04■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 112.5 ms