RNA–Protein interactions for RNA: ENST00000409953.5

UBE2F-204, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 3 BASIC

Gene UBE2F, Length 924 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-204ENST00000409953 TEPSINQ96N21 525 aa9.3□□□□□ -0.92
UBE2F-204ENST00000409953 TLL1O43897 1013 aa9.29□□□□□ -0.92
UBE2F-204ENST00000409953 ZKSCAN4Q969J2 545 aaPredicted RBP9.29□□□□□ -0.92
UBE2F-204ENST00000409953 WRNIP1Q96S55 665 aa9.29□□□□□ -0.92
UBE2F-204ENST00000409953 COA1Q9GZY4 146 aa9.29□□□□□ -0.92
UBE2F-204ENST00000409953 CD320Q9NPF0 282 aa9.29□□□□□ -0.92
UBE2F-204ENST00000409953 SEC31BQ9NQW1 1179 aa9.29□□□□□ -0.92
UBE2F-204ENST00000409953 ATP11BQ9Y2G3 1177 aa9.29□□□□□ -0.92
UBE2F-204ENST00000409953 ZNF318Q5VUA4 2279 aa9.29□□□□□ -0.92
UBE2F-204ENST00000409953 DOCK3Q8IZD9 2030 aa9.28□□□□□ -0.92
UBE2F-204ENST00000409953 GTF2IP78347 998 aa9.28□□□□□ -0.92
UBE2F-204ENST00000409953 PPATQ06203 517 aa9.28□□□□□ -0.92
UBE2F-204ENST00000409953 MOGSQ13724 837 aa9.28□□□□□ -0.92
UBE2F-204ENST00000409953 MCM10Q7L590 875 aa9.28□□□□□ -0.92
UBE2F-204ENST00000409953 FAM89AQ96GI7 184 aa9.28□□□□□ -0.92
UBE2F-204ENST00000409953 THUMPD2Q9BTF0 503 aaKnown RBP9.28□□□□□ -0.92
UBE2F-204ENST00000409953 TMEM39BQ9GZU3 492 aa9.28□□□□□ -0.92
UBE2F-204ENST00000409953 ZFHX2Q9C0A1 2572 aaPredicted RBP9.27□□□□□ -0.92
UBE2F-204ENST00000409953 PTPRZ1P23471 2315 aaPredicted RBP9.27□□□□□ -0.92
UBE2F-204ENST00000409953 F8W031 263 aaPredicted RBP9.27□□□□□ -0.93
UBE2F-204ENST00000409953 PBX2P40425 430 aa9.27□□□□□ -0.93
UBE2F-204ENST00000409953 EPHB4P54760 987 aa9.27□□□□□ -0.93
UBE2F-204ENST00000409953 MAP3K21Q5TCX8 1036 aa9.27□□□□□ -0.93
UBE2F-204ENST00000409953 TRIB2Q92519 343 aa9.27□□□□□ -0.93
UBE2F-204ENST00000409953 ANKS1AQ92625 1134 aa9.27□□□□□ -0.93
UBE2F-204ENST00000409953 DCBLD2Q96PD2 775 aa9.27□□□□□ -0.93
UBE2F-204ENST00000409953 TSHZ2Q9NRE2 1034 aa9.27□□□□□ -0.93
UBE2F-204ENST00000409953 REV3LO60673 3130 aa9.27□□□□□ -0.93
UBE2F-204ENST00000409953 DCHS1Q96JQ0 3298 aa9.26□□□□□ -0.93
UBE2F-204ENST00000409953 ARAP2Q8WZ64 1704 aa9.26□□□□□ -0.93
UBE2F-204ENST00000409953 DIAPH1O60610 1272 aaKnown RBP9.26□□□□□ -0.93
UBE2F-204ENST00000409953 RBM5P52756 815 aaKnown RBP eCLIP9.26□□□□□ -0.93
UBE2F-204ENST00000409953 COL9A2Q14055 689 aaPredicted RBP9.26□□□□□ -0.93
UBE2F-204ENST00000409953 RTL5Q5HYW3 569 aaPredicted RBP9.26□□□□□ -0.93
UBE2F-204ENST00000409953 LHX8Q68G74 356 aa9.26□□□□□ -0.93
UBE2F-204ENST00000409953 GPAT2Q6NUI2 795 aa9.26□□□□□ -0.93
UBE2F-204ENST00000409953 LRP10Q7Z4F1 713 aa9.26□□□□□ -0.93
UBE2F-204ENST00000409953 CERS5Q8N5B7 392 aa9.26□□□□□ -0.93
UBE2F-204ENST00000409953 PBX4Q9BYU1 374 aa9.26□□□□□ -0.93
UBE2F-204ENST00000409953 MIS18AQ9NYP9 233 aa9.26□□□□□ -0.93
UBE2F-204ENST00000409953 CHD9Q3L8U1 2897 aa9.25□□□□□ -0.93
UBE2F-204ENST00000409953 TCP10L2B9ZVM9 353 aa9.25□□□□□ -0.93
UBE2F-204ENST00000409953 IRX5P78411 483 aaPredicted RBP9.25□□□□□ -0.93
UBE2F-204ENST00000409953 CCDC129Q6ZRS4 1044 aa9.25□□□□□ -0.93
UBE2F-204ENST00000409953 TXNRD3Q86VQ6 643 aa9.25□□□□□ -0.93
UBE2F-204ENST00000409953 SMCR8Q8TEV9 937 aaPredicted RBP9.25□□□□□ -0.93
UBE2F-204ENST00000409953 HERVK_113Q902F9 699 aa9.25□□□□□ -0.93
UBE2F-204ENST00000409953 RTF1Q92541 710 aaKnown RBP9.25□□□□□ -0.93
UBE2F-204ENST00000409953 PDLIM7Q9NR12 457 aa9.25□□□□□ -0.93
UBE2F-204ENST00000409953 ZNF70Q9UC06 446 aaPredicted RBP9.25□□□□□ -0.93
UBE2F-204ENST00000409953 TPRP12270 2363 aaKnown RBP9.25□□□□□ -0.93
UBE2F-204ENST00000409953 TRIM43BA6NCK2 446 aa9.24□□□□□ -0.93
UBE2F-204ENST00000409953 ALADP13716 330 aa9.24□□□□□ -0.93
UBE2F-204ENST00000409953 PTPN5P54829 565 aa9.24□□□□□ -0.93
UBE2F-204ENST00000409953 DCTN1Q14203 1278 aa9.24□□□□□ -0.93
UBE2F-204ENST00000409953 SH3RF1Q7Z6J0 888 aa9.24□□□□□ -0.93
UBE2F-204ENST00000409953 PRSS33Q8NF86 280 aa9.24□□□□□ -0.93
UBE2F-204ENST00000409953 TRIM43Q96BQ3 446 aaPredicted RBP9.24□□□□□ -0.93
UBE2F-204ENST00000409953 COG5Q9UP83 839 aa9.24□□□□□ -0.93
UBE2F-204ENST00000409953 GRXCR1A8MXD5 290 aa9.23□□□□□ -0.93
UBE2F-204ENST00000409953 IRS4O14654 1257 aaPredicted RBP9.23□□□□□ -0.93
UBE2F-204ENST00000409953 U2SURPO15042 1029 aaKnown RBP9.23□□□□□ -0.93
UBE2F-204ENST00000409953 PPP1R37O75864 691 aa9.23□□□□□ -0.93
UBE2F-204ENST00000409953 ANXA1P04083 346 aa9.23□□□□□ -0.93
UBE2F-204ENST00000409953 CCND3P30281 292 aaPredicted RBP9.23□□□□□ -0.93
UBE2F-204ENST00000409953 AIMP1Q12904 312 aaKnown RBP9.23□□□□□ -0.93
UBE2F-204ENST00000409953 PDIA6Q15084 440 aa9.23□□□□□ -0.93
UBE2F-204ENST00000409953 COPS6Q7L5N1 327 aa9.23□□□□□ -0.93
UBE2F-204ENST00000409953 ANKRD13CQ8N6S4 541 aa9.23□□□□□ -0.93
UBE2F-204ENST00000409953 PHACTR3Q96KR7 559 aa9.23□□□□□ -0.93
UBE2F-204ENST00000409953 TDRD3Q9H7E2 651 aaKnown RBP9.23□□□□□ -0.93
UBE2F-204ENST00000409953 GJD2Q9UKL4 321 aa9.23□□□□□ -0.93
UBE2F-204ENST00000409953 PLXNA1Q9UIW2 1896 aa9.23□□□□□ -0.93
UBE2F-204ENST00000409953 ID4P47928 161 aa9.22□□□□□ -0.93
UBE2F-204ENST00000409953 TNNI2P48788 182 aa9.22□□□□□ -0.93
UBE2F-204ENST00000409953 CCT4P50991 539 aaKnown RBP9.22□□□□□ -0.93
UBE2F-204ENST00000409953 CACNB2Q08289 660 aaPredicted RBP9.22□□□□□ -0.93
UBE2F-204ENST00000409953 TRIM26Q12899 539 aaPredicted RBP9.22□□□□□ -0.93
UBE2F-204ENST00000409953 TAF7Q15545 349 aaPredicted RBP9.22□□□□□ -0.93
UBE2F-204ENST00000409953 PROSER3Q2NL68 480 aa9.22□□□□□ -0.93
UBE2F-204ENST00000409953 TRIM60Q495X7 471 aa9.22□□□□□ -0.93
UBE2F-204ENST00000409953 ANKRD18AQ8IVF6 992 aa9.22□□□□□ -0.93
UBE2F-204ENST00000409953 GJD3Q8N144 294 aa9.22□□□□□ -0.93
UBE2F-204ENST00000409953 CNTNAP3BQ96NU0 1288 aa9.22□□□□□ -0.93
UBE2F-204ENST00000409953 CNTNAP3Q9BZ76 1288 aa9.22□□□□□ -0.93
UBE2F-204ENST00000409953 BSDC1Q9NW68 430 aaPredicted RBP9.22□□□□□ -0.93
UBE2F-204ENST00000409953 FRMPD3Q5JV73 1810 aa9.21□□□□□ -0.93
UBE2F-204ENST00000409953 CHD7Q9P2D1 2997 aa9.21□□□□□ -0.93
UBE2F-204ENST00000409953 AK9Q5TCS8 1911 aa9.21□□□□□ -0.93
UBE2F-204ENST00000409953 CHD6Q8TD26 2715 aa9.21□□□□□ -0.93
UBE2F-204ENST00000409953 NCOR2Q9Y618 2525 aa9.21□□□□□ -0.94
UBE2F-204ENST00000409953 MED19A0JLT2 244 aaPredicted RBP9.21□□□□□ -0.94
UBE2F-204ENST00000409953 CYP2B6P20813 491 aa9.21□□□□□ -0.94
UBE2F-204ENST00000409953 KLRK1P26718 216 aa9.21□□□□□ -0.94
UBE2F-204ENST00000409953 INPP5BP32019 993 aa9.21□□□□□ -0.94
UBE2F-204ENST00000409953 EIF4A1P60842 406 aaKnown RBP9.21□□□□□ -0.94
UBE2F-204ENST00000409953 FPGSQ05932 587 aa9.21□□□□□ -0.94
UBE2F-204ENST00000409953 FAM110CQ1W6H9 321 aa9.21□□□□□ -0.94
UBE2F-204ENST00000409953 HFE2Q6ZVN8 426 aa9.21□□□□□ -0.94
UBE2F-204ENST00000409953 XAGE3Q8WTP9 111 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms