RNA–Protein interactions for RNA: ENST00000409064.5

KDM3A-202, Transcript of lysine demethylase 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KDM3A, Length 4,621 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-202ENST00000409064 CHMP2AO43633 222 aa11.49□□□□□ -0.57
KDM3A-202ENST00000409064 ALAS1P13196 640 aa11.49□□□□□ -0.57
KDM3A-202ENST00000409064 EZH2Q15910 746 aaKnown RBP11.49□□□□□ -0.57
KDM3A-202ENST00000409064 LETM2Q2VYF4 491 aa11.49□□□□□ -0.57
KDM3A-202ENST00000409064 USP17L1Q7RTZ2 530 aa11.49□□□□□ -0.57
KDM3A-202ENST00000409064 MARCH10Q8NA82 808 aaPredicted RBP11.49□□□□□ -0.57
KDM3A-202ENST00000409064 USP17L8P0C7I0 530 aa11.49□□□□□ -0.57
KDM3A-202ENST00000409064 CHRNA5P30532 468 aa11.49□□□□□ -0.57
KDM3A-202ENST00000409064 NCAPG2Q86XI2 1143 aa11.49□□□□□ -0.57
KDM3A-202ENST00000409064 ANKRD35Q8N283 1001 aa11.49□□□□□ -0.57
KDM3A-202ENST00000409064 FBXO41Q8TF61 875 aa11.49□□□□□ -0.57
KDM3A-202ENST00000409064 LRRC27Q9C0I9 530 aa11.49□□□□□ -0.57
KDM3A-202ENST00000409064 BMP15O95972 392 aa11.49□□□□□ -0.57
KDM3A-202ENST00000409064 PLCD3Q8N3E9 789 aa11.49□□□□□ -0.57
KDM3A-202ENST00000409064 EAF2Q96CJ1 260 aaPredicted RBP11.49□□□□□ -0.57
KDM3A-202ENST00000409064 V9GY48 417 aaPredicted RBP11.49□□□□□ -0.57
KDM3A-202ENST00000409064 ADGRB3O60242 1522 aa11.49□□□□□ -0.57
KDM3A-202ENST00000409064 MYOM1P52179 1685 aa11.48□□□□□ -0.57
KDM3A-202ENST00000409064 GRIN3BO60391 1043 aa11.48□□□□□ -0.57
KDM3A-202ENST00000409064 MTIF2P46199 727 aaKnown RBP11.48□□□□□ -0.57
KDM3A-202ENST00000409064 ICA1Q05084 483 aa11.48□□□□□ -0.57
KDM3A-202ENST00000409064 TAF12Q16514 161 aa11.48□□□□□ -0.57
KDM3A-202ENST00000409064 C2orf69Q8N8R5 385 aa11.48□□□□□ -0.57
KDM3A-202ENST00000409064 SPATA31A1Q5TZJ5 1347 aa11.48□□□□□ -0.57
KDM3A-202ENST00000409064 PDE6AP16499 860 aa11.48□□□□□ -0.57
KDM3A-202ENST00000409064 DPP9Q86TI2 863 aa11.48□□□□□ -0.57
KDM3A-202ENST00000409064 SIRT2Q8IXJ6 389 aa11.48□□□□□ -0.57
KDM3A-202ENST00000409064 PTCH1Q13635 1447 aa11.48□□□□□ -0.57
KDM3A-202ENST00000409064 SMTNL1A8MU46 457 aa11.48□□□□□ -0.57
KDM3A-202ENST00000409064 ADCY5O95622 1261 aa11.48□□□□□ -0.57
KDM3A-202ENST00000409064 MCM7P33993 719 aa11.48□□□□□ -0.57
KDM3A-202ENST00000409064 STAT6P42226 847 aa11.48□□□□□ -0.57
KDM3A-202ENST00000409064 NFIXQ14938 502 aa11.48□□□□□ -0.57
KDM3A-202ENST00000409064 TBC1D9BQ66K14 1250 aa11.48□□□□□ -0.57
KDM3A-202ENST00000409064 EP400NLQ6ZTU2 488 aa11.48□□□□□ -0.57
KDM3A-202ENST00000409064 RAD50Q92878 1312 aa11.48□□□□□ -0.57
KDM3A-202ENST00000409064 MARCKSP29966 332 aaPredicted RBP11.48□□□□□ -0.57
KDM3A-202ENST00000409064 AFMP43652 599 aa11.48□□□□□ -0.57
KDM3A-202ENST00000409064 JAKMIP3Q5VZ66 844 aa11.48□□□□□ -0.57
KDM3A-202ENST00000409064 ISM2Q6H9L7 571 aa11.48□□□□□ -0.57
KDM3A-202ENST00000409064 MIGA2Q7L4E1 593 aa11.48□□□□□ -0.57
KDM3A-202ENST00000409064 CBFA2T2O43439 604 aa11.47□□□□□ -0.57
KDM3A-202ENST00000409064 UBE2HP62256 183 aa11.47□□□□□ -0.57
KDM3A-202ENST00000409064 AZI2Q9H6S1 392 aa11.47□□□□□ -0.57
KDM3A-202ENST00000409064 GLI2P10070 1586 aa11.47□□□□□ -0.57
KDM3A-202ENST00000409064 IREB2P48200 963 aaKnown RBP11.47□□□□□ -0.57
KDM3A-202ENST00000409064 AKNAD1Q5T1N1 836 aa11.47□□□□□ -0.57
KDM3A-202ENST00000409064 UIMC1Q96RL1 719 aa11.47□□□□□ -0.57
KDM3A-202ENST00000409064 RBM28Q9NW13 759 aaKnown RBP11.47□□□□□ -0.57
KDM3A-202ENST00000409064 CAMSAP1Q5T5Y3 1602 aa11.47□□□□□ -0.57
KDM3A-202ENST00000409064 DDX39AO00148 427 aaKnown RBP11.47□□□□□ -0.57
KDM3A-202ENST00000409064 HARSP12081 509 aaKnown RBP11.47□□□□□ -0.57
KDM3A-202ENST00000409064 CPA1P15085 419 aa11.47□□□□□ -0.57
KDM3A-202ENST00000409064 TNNT3P45378 269 aaPredicted RBP11.47□□□□□ -0.57
KDM3A-202ENST00000409064 ABCB5Q2M3G0 1257 aa11.47□□□□□ -0.57
KDM3A-202ENST00000409064 SPICE1Q8N0Z3 855 aa11.47□□□□□ -0.57
KDM3A-202ENST00000409064 PRIMPOLQ96LW4 560 aa11.47□□□□□ -0.57
KDM3A-202ENST00000409064 ARPP21Q9UBL0 812 aaPredicted RBP11.47□□□□□ -0.57
KDM3A-202ENST00000409064 ATP5JP18859 108 aa11.47□□□□□ -0.57
KDM3A-202ENST00000409064 ADORA1P30542 326 aa11.47□□□□□ -0.57
KDM3A-202ENST00000409064 PKP1Q13835 747 aa11.47□□□□□ -0.57
KDM3A-202ENST00000409064 FAM177A1Q8N128 213 aaPredicted RBP11.47□□□□□ -0.57
KDM3A-202ENST00000409064 ZNF397Q8NF99 534 aaPredicted RBP11.47□□□□□ -0.57
KDM3A-202ENST00000409064 TMEM87BQ96K49 555 aa11.47□□□□□ -0.57
KDM3A-202ENST00000409064 MYL10Q9BUA6 226 aa11.47□□□□□ -0.57
KDM3A-202ENST00000409064 EXOC1Q9NV70 894 aa11.47□□□□□ -0.57
KDM3A-202ENST00000409064 COL15A1P39059 1388 aa11.46□□□□□ -0.57
KDM3A-202ENST00000409064 SEMA3EO15041 775 aa11.46□□□□□ -0.57
KDM3A-202ENST00000409064 ASIC1P78348 528 aa11.46□□□□□ -0.57
KDM3A-202ENST00000409064 VPS36Q86VN1 386 aa11.46□□□□□ -0.57
KDM3A-202ENST00000409064 GLG1Q92896 1179 aa11.46□□□□□ -0.57
KDM3A-202ENST00000409064 PYM1Q9BRP8 204 aaKnown RBP11.46□□□□□ -0.57
KDM3A-202ENST00000409064 GPBP1L1Q9HC44 474 aaPredicted RBP11.46□□□□□ -0.57
KDM3A-202ENST00000409064 ANGEL1Q9UNK9 670 aaKnown RBP11.46□□□□□ -0.57
KDM3A-202ENST00000409064 ZSCAN22P10073 491 aaPredicted RBP11.46□□□□□ -0.57
KDM3A-202ENST00000409064 CYP19A1P11511 503 aaPredicted RBP11.46□□□□□ -0.57
KDM3A-202ENST00000409064 KRT2P35908 639 aa11.46□□□□□ -0.57
KDM3A-202ENST00000409064 CCNA1P78396 465 aa11.46□□□□□ -0.57
KDM3A-202ENST00000409064 SYNE4Q8N205 404 aa11.46□□□□□ -0.57
KDM3A-202ENST00000409064 TMEM63CQ9P1W3 806 aa11.46□□□□□ -0.57
KDM3A-202ENST00000409064 ABCA9Q8IUA7 1624 aa11.46□□□□□ -0.57
KDM3A-202ENST00000409064 FAM13AO94988 1023 aa11.46□□□□□ -0.58
KDM3A-202ENST00000409064 ZNF853P0CG23 659 aa11.46□□□□□ -0.58
KDM3A-202ENST00000409064 USP37Q86T82 979 aa11.46□□□□□ -0.58
KDM3A-202ENST00000409064 LRRC47Q8N1G4 583 aaKnown RBP11.46□□□□□ -0.58
KDM3A-202ENST00000409064 PLIN2Q99541 437 aa11.46□□□□□ -0.58
KDM3A-202ENST00000409064 KIF2CQ99661 725 aa11.46□□□□□ -0.58
KDM3A-202ENST00000409064 ZNF500O60304 480 aaPredicted RBP11.45□□□□□ -0.58
KDM3A-202ENST00000409064 DIXDC1Q155Q3 683 aa11.45□□□□□ -0.58
KDM3A-202ENST00000409064 AOC3Q16853 763 aa11.45□□□□□ -0.58
KDM3A-202ENST00000409064 CETN2P41208 172 aa11.45□□□□□ -0.58
KDM3A-202ENST00000409064 KCTD2Q14681 263 aa11.45□□□□□ -0.58
KDM3A-202ENST00000409064 TDRD12Q587J7 1177 aaKnown RBP11.45□□□□□ -0.58
KDM3A-202ENST00000409064 TXLNBQ8N3L3 684 aa11.45□□□□□ -0.58
KDM3A-202ENST00000409064 COA1Q9GZY4 146 aa11.45□□□□□ -0.58
KDM3A-202ENST00000409064 ZSCAN16Q9H4T2 348 aaPredicted RBP11.45□□□□□ -0.58
KDM3A-202ENST00000409064 MACROD2A1Z1Q3 448 aa11.45□□□□□ -0.58
KDM3A-202ENST00000409064 IQCA1LA6NCM1 817 aa11.45□□□□□ -0.58
KDM3A-202ENST00000409064 PATL2C9JE40 543 aaKnown RBP11.45□□□□□ -0.58
KDM3A-202ENST00000409064 CLEC17AQ6ZS10 378 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms