RNA–Protein interactions for RNA: ENST00000400337.6

COL18A1-204, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL18A1, Length 5,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-204ENST00000400337 RPL13P26373 211 aaKnown RBP20.47■□□□□ 0.87
COL18A1-204ENST00000400337 TXKP42681 527 aa20.47■□□□□ 0.87
COL18A1-204ENST00000400337 VPS16Q9H269 839 aa20.47■□□□□ 0.87
COL18A1-204ENST00000400337 RAPGEF1Q13905 1077 aa20.46■□□□□ 0.87
COL18A1-204ENST00000400337 TTLL7Q6ZT98 887 aa20.46■□□□□ 0.87
COL18A1-204ENST00000400337 KDRP35968 1356 aa20.46■□□□□ 0.87
COL18A1-204ENST00000400337 IBTKQ9P2D0 1353 aaPredicted RBP20.46■□□□□ 0.87
COL18A1-204ENST00000400337 EEF2P13639 858 aaKnown RBP20.46■□□□□ 0.87
COL18A1-204ENST00000400337 NOC4LQ9BVI4 516 aaKnown RBP20.46■□□□□ 0.87
COL18A1-204ENST00000400337 RASAL2Q9UJF2 1139 aa20.46■□□□□ 0.87
COL18A1-204ENST00000400337 NEO1Q92859 1461 aa20.46■□□□□ 0.87
COL18A1-204ENST00000400337 KCNJ14Q9UNX9 436 aa20.46■□□□□ 0.87
COL18A1-204ENST00000400337 MAGI2Q86UL8 1455 aa20.46■□□□□ 0.87
COL18A1-204ENST00000400337 DPP8Q6V1X1 898 aaPredicted RBP20.46■□□□□ 0.87
COL18A1-204ENST00000400337 CHMP2AO43633 222 aa20.45■□□□□ 0.86
COL18A1-204ENST00000400337 BEND3Q5T5X7 828 aa20.45■□□□□ 0.86
COL18A1-204ENST00000400337 MAPKAPK5Q8IW41 473 aa20.45■□□□□ 0.86
COL18A1-204ENST00000400337 KDM5AP29375 1690 aaKnown RBP20.45■□□□□ 0.86
COL18A1-204ENST00000400337 ZNF202O95125 648 aa20.45■□□□□ 0.86
COL18A1-204ENST00000400337 CTSWP56202 376 aa20.45■□□□□ 0.86
COL18A1-204ENST00000400337 TBC1D8BQ0IIM8 1120 aa20.45■□□□□ 0.86
COL18A1-204ENST00000400337 DPH6Q7L8W6 267 aa20.45■□□□□ 0.86
COL18A1-204ENST00000400337 IGSF22Q8N9C0 903 aa20.45■□□□□ 0.86
COL18A1-204ENST00000400337 TM6SF1Q9BZW5 370 aa20.45■□□□□ 0.86
COL18A1-204ENST00000400337 hCG_1642624A0A1W2PR95 340 aa20.45■□□□□ 0.86
COL18A1-204ENST00000400337 YEATS2Q9ULM3 1422 aa20.45■□□□□ 0.86
COL18A1-204ENST00000400337 ECM2O94769 699 aaPredicted RBP20.45■□□□□ 0.86
COL18A1-204ENST00000400337 ME3Q16798 604 aa20.45■□□□□ 0.86
COL18A1-204ENST00000400337 A0A0D9SFI3 127 aa20.44■□□□□ 0.86
COL18A1-204ENST00000400337 GRM1Q13255 1194 aa20.44■□□□□ 0.86
COL18A1-204ENST00000400337 PLEKHF1Q96S99 279 aa20.44■□□□□ 0.86
COL18A1-204ENST00000400337 PTH1RQ03431 593 aa20.44■□□□□ 0.86
COL18A1-204ENST00000400337 CCDC122Q5T0U0 273 aa20.44■□□□□ 0.86
COL18A1-204ENST00000400337 GJA3Q9Y6H8 435 aa20.44■□□□□ 0.86
COL18A1-204ENST00000400337 MAST3O60307 1309 aa20.44■□□□□ 0.86
COL18A1-204ENST00000400337 SPECC1LQ69YQ0 1117 aa20.44■□□□□ 0.86
COL18A1-204ENST00000400337 PPP1R9BQ96SB3 815 aa20.44■□□□□ 0.86
COL18A1-204ENST00000400337 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.43■□□□□ 0.861e-6■■■■□ 23.4
COL18A1-204ENST00000400337 ZYXQ15942 572 aaKnown RBP20.43■□□□□ 0.86
COL18A1-204ENST00000400337 CBX8Q9HC52 389 aa20.43■□□□□ 0.86
COL18A1-204ENST00000400337 ZFYVE16Q7Z3T8 1539 aa20.43■□□□□ 0.86
COL18A1-204ENST00000400337 A0A1W2PRG0 241 aa20.43■□□□□ 0.86
COL18A1-204ENST00000400337 TGFBRAP1Q8WUH2 860 aa20.43■□□□□ 0.86
COL18A1-204ENST00000400337 ARHGEF10LQ9HCE6 1279 aa20.43■□□□□ 0.86
COL18A1-204ENST00000400337 RHOXF2BP0C7M4 288 aa20.43■□□□□ 0.86
COL18A1-204ENST00000400337 PPP1R2P41236 205 aa20.43■□□□□ 0.86
COL18A1-204ENST00000400337 ZBTB9Q96C00 473 aa20.43■□□□□ 0.86
COL18A1-204ENST00000400337 RHOXF2Q9BQY4 288 aa20.43■□□□□ 0.86
COL18A1-204ENST00000400337 LMBRD1Q9NUN5 540 aa20.43■□□□□ 0.86
COL18A1-204ENST00000400337 PPP2R5BQ15173 497 aa20.43■□□□□ 0.86
COL18A1-204ENST00000400337 CNNM4Q6P4Q7 775 aa20.43■□□□□ 0.86
COL18A1-204ENST00000400337 GIMAP7Q8NHV1 300 aa20.43■□□□□ 0.86
COL18A1-204ENST00000400337 VTI1AQ96AJ9 217 aa20.43■□□□□ 0.86
COL18A1-204ENST00000400337 COMMD10Q9Y6G5 202 aa20.43■□□□□ 0.86
COL18A1-204ENST00000400337 ARHGEF5Q12774 1597 aa20.42■□□□□ 0.86
COL18A1-204ENST00000400337 CERS3Q8IU89 383 aa20.42■□□□□ 0.86
COL18A1-204ENST00000400337 SEC62Q99442 399 aaKnown RBP20.42■□□□□ 0.86
COL18A1-204ENST00000400337 GCC2Q8IWJ2 1684 aa20.42■□□□□ 0.86
COL18A1-204ENST00000400337 MBD5Q9P267 1494 aa20.42■□□□□ 0.86
COL18A1-204ENST00000400337 SLC1A4P43007 532 aa20.42■□□□□ 0.86
COL18A1-204ENST00000400337 RPS8P62241 208 aaKnown RBP20.42■□□□□ 0.86
COL18A1-204ENST00000400337 FANCCQ00597 558 aa20.42■□□□□ 0.86
COL18A1-204ENST00000400337 TFAP4Q01664 338 aa20.42■□□□□ 0.86
COL18A1-204ENST00000400337 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.42■□□□□ 0.86
COL18A1-204ENST00000400337 FRMD4BQ9Y2L6 1034 aa20.42■□□□□ 0.86
COL18A1-204ENST00000400337 NONOQ15233 471 aaKnown RBP eCLIP20.42■□□□□ 0.862e-6■■■■□ 24.2
COL18A1-204ENST00000400337 FAM47AQ5JRC9 791 aa20.42■□□□□ 0.86
COL18A1-204ENST00000400337 CCDC50Q8IVM0 306 aa20.42■□□□□ 0.86
COL18A1-204ENST00000400337 STK32BQ9NY57 414 aa20.42■□□□□ 0.86
COL18A1-204ENST00000400337 PLCB3Q01970 1234 aa20.42■□□□□ 0.86
COL18A1-204ENST00000400337 GIGYF2Q6Y7W6 1299 aaKnown RBP20.42■□□□□ 0.86
COL18A1-204ENST00000400337 GSTA5Q7RTV2 222 aa20.42■□□□□ 0.86
COL18A1-204ENST00000400337 DDX12PQ92771 950 aa20.42■□□□□ 0.86
COL18A1-204ENST00000400337 ADGBQ8N7X0 1667 aa20.42■□□□□ 0.86
COL18A1-204ENST00000400337 METP08581 1390 aa20.41■□□□□ 0.86
COL18A1-204ENST00000400337 FAM135BQ49AJ0 1406 aa20.41■□□□□ 0.86
COL18A1-204ENST00000400337 HAUS3Q68CZ6 603 aa20.41■□□□□ 0.86
COL18A1-204ENST00000400337 CSGALNACT2Q8N6G5 542 aa20.41■□□□□ 0.86
COL18A1-204ENST00000400337 GTF3C6Q969F1 213 aa20.41■□□□□ 0.86
COL18A1-204ENST00000400337 EPB41P11171 864 aaKnown RBP20.41■□□□□ 0.86
COL18A1-204ENST00000400337 TCP10Q12799 353 aa20.41■□□□□ 0.86
COL18A1-204ENST00000400337 VPS54Q9P1Q0 977 aa20.41■□□□□ 0.86
COL18A1-204ENST00000400337 PALD1Q9ULE6 856 aa20.41■□□□□ 0.86
COL18A1-204ENST00000400337 ZFP91Q96JP5 570 aaPredicted RBP20.41■□□□□ 0.86
COL18A1-204ENST00000400337 SYNRGQ9UMZ2 1314 aa20.41■□□□□ 0.86
COL18A1-204ENST00000400337 BRD1O95696 1058 aa20.4■□□□□ 0.86
COL18A1-204ENST00000400337 NCBP1Q09161 790 aaKnown RBP20.4■□□□□ 0.86
COL18A1-204ENST00000400337 ZHX1Q9UKY1 873 aaPredicted RBP20.4■□□□□ 0.86
COL18A1-204ENST00000400337 PPARAQ07869 468 aa20.4■□□□□ 0.86
COL18A1-204ENST00000400337 MLKLQ8NB16 471 aa20.4■□□□□ 0.86
COL18A1-204ENST00000400337 ADCY7P51828 1080 aa20.4■□□□□ 0.86
COL18A1-204ENST00000400337 ZNF445P59923 1031 aa20.4■□□□□ 0.86
COL18A1-204ENST00000400337 GRIPAP1Q4V328 841 aa20.4■□□□□ 0.86
COL18A1-204ENST00000400337 PPP1R14CQ8TAE6 165 aa20.4■□□□□ 0.86
COL18A1-204ENST00000400337 LRWD1Q9UFC0 647 aa20.4■□□□□ 0.86
COL18A1-204ENST00000400337 LRRC24Q50LG9 513 aa20.4■□□□□ 0.86
COL18A1-204ENST00000400337 KRT25Q7Z3Z0 450 aa20.4■□□□□ 0.86
COL18A1-204ENST00000400337 H0YIN7 160 aa20.39■□□□□ 0.86
COL18A1-204ENST00000400337 OPA1O60313 960 aa20.39■□□□□ 0.86
COL18A1-204ENST00000400337 PAK1Q13153 545 aa20.39■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms