RNA–Protein interactions for RNA: ENST00000397442.5

CPNE1-203, Transcript of copine 1, humanhuman

TSL 5 BASIC

Gene CPNE1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-203ENST00000397442 SBK1Q52WX2 424 aa32.62■■■□□ 2.81
CPNE1-203ENST00000397442 PDRG1Q9NUG6 133 aa32.62■■■□□ 2.81
CPNE1-203ENST00000397442 UTRNP46939 3433 aa32.62■■■□□ 2.81
CPNE1-203ENST00000397442 MINDY4BA8MYZ0 360 aa32.61■■■□□ 2.81
CPNE1-203ENST00000397442 HMGB1P09429 215 aaKnown RBP32.61■■■□□ 2.81
CPNE1-203ENST00000397442 USP40Q9NVE5 1235 aa32.61■■■□□ 2.81
CPNE1-203ENST00000397442 AK2P54819 239 aa32.6■■■□□ 2.81
CPNE1-203ENST00000397442 EVX2Q03828 476 aa32.6■■■□□ 2.81
CPNE1-203ENST00000397442 MAPKAPK5Q8IW41 473 aa32.6■■■□□ 2.81
CPNE1-203ENST00000397442 NKX2-3Q8TAU0 364 aa32.6■■■□□ 2.81
CPNE1-203ENST00000397442 TCEANC2Q96MN5 208 aa32.6■■■□□ 2.81
CPNE1-203ENST00000397442 INCENPQ9NQS7 918 aa32.6■■■□□ 2.81
CPNE1-203ENST00000397442 MCM9Q9NXL9 1143 aa32.6■■■□□ 2.81
CPNE1-203ENST00000397442 ARPP21Q9UBL0 812 aaPredicted RBP32.6■■■□□ 2.81
CPNE1-203ENST00000397442 FLT1P17948 1338 aa32.59■■■□□ 2.81
CPNE1-203ENST00000397442 NEDD4P46934 1319 aa32.59■■■□□ 2.81
CPNE1-203ENST00000397442 WDHD1O75717 1129 aaPredicted RBP32.59■■■□□ 2.81
CPNE1-203ENST00000397442 USP17L8P0C7I0 530 aa32.59■■■□□ 2.81
CPNE1-203ENST00000397442 EXOSC10Q01780 885 aaKnown RBP32.59■■■□□ 2.81
CPNE1-203ENST00000397442 CFAP100Q494V2 611 aa32.59■■■□□ 2.81
CPNE1-203ENST00000397442 AKNAD1Q5T1N1 836 aa32.59■■■□□ 2.81
CPNE1-203ENST00000397442 DHX32Q7L7V1 743 aaKnown RBP32.59■■■□□ 2.81
CPNE1-203ENST00000397442 STAG1Q8WVM7 1258 aa32.59■■■□□ 2.81
CPNE1-203ENST00000397442 CYP2D6P10635 497 aa32.59■■■□□ 2.81
CPNE1-203ENST00000397442 RBM5P52756 815 aaKnown RBP eCLIP32.59■■■□□ 2.812e-6■■■□□ 15.7
CPNE1-203ENST00000397442 MB21D2Q8IYB1 491 aaPredicted RBP32.59■■■□□ 2.81
CPNE1-203ENST00000397442 NCOA7Q8NI08 942 aa32.59■■■□□ 2.81
CPNE1-203ENST00000397442 ALDH8A1Q9H2A2 487 aaPredicted RBP32.59■■■□□ 2.81
CPNE1-203ENST00000397442 MCM2P49736 904 aa32.58■■■□□ 2.81
CPNE1-203ENST00000397442 ZNF541Q9H0D2 1346 aa32.57■■■□□ 2.8
CPNE1-203ENST00000397442 EIF6P56537 245 aaKnown RBP32.57■■■□□ 2.8
CPNE1-203ENST00000397442 MYH1P12882 1939 aa32.56■■■□□ 2.8
CPNE1-203ENST00000397442 C12orf60Q5U649 245 aa32.56■■■□□ 2.8
CPNE1-203ENST00000397442 PRMT6Q96LA8 375 aaPredicted RBP32.56■■■□□ 2.8
CPNE1-203ENST00000397442 DDX4Q9NQI0 724 aaKnown RBP32.56■■■□□ 2.8
CPNE1-203ENST00000397442 HDAC9Q9UKV0 1011 aa32.56■■■□□ 2.8
CPNE1-203ENST00000397442 MFSD6Q6ZSS7 791 aa32.56■■■□□ 2.8
CPNE1-203ENST00000397442 OGFOD1Q8N543 542 aa32.56■■■□□ 2.8
CPNE1-203ENST00000397442 DAXXQ9UER7 740 aaPredicted RBP32.56■■■□□ 2.8
CPNE1-203ENST00000397442 FGRP09769 529 aa32.55■■■□□ 2.8
CPNE1-203ENST00000397442 TOB2Q14106 344 aaPredicted RBP32.55■■■□□ 2.8
CPNE1-203ENST00000397442 RALYLQ86SE5 291 aaKnown RBP32.55■■■□□ 2.8
CPNE1-203ENST00000397442 RPS12P25398 132 aaKnown RBP32.54■■■□□ 2.8
CPNE1-203ENST00000397442 ANTXR2P58335 489 aa32.54■■■□□ 2.8
CPNE1-203ENST00000397442 TRDNQ13061 729 aa32.54■■■□□ 2.8
CPNE1-203ENST00000397442 NOL8Q76FK4 1167 aaKnown RBP32.54■■■□□ 2.8
CPNE1-203ENST00000397442 SAP30BPQ9UHR5 308 aaKnown RBP32.54■■■□□ 2.8
CPNE1-203ENST00000397442 SPDYE2BA6NHP3 402 aa32.53■■■□□ 2.8
CPNE1-203ENST00000397442 SPDYE6P0CI01 402 aa32.53■■■□□ 2.8
CPNE1-203ENST00000397442 NFIAQ12857 509 aa32.53■■■□□ 2.8
CPNE1-203ENST00000397442 STK11IPQ8N1F8 1099 aa32.53■■■□□ 2.8
CPNE1-203ENST00000397442 RNF41Q9H4P4 317 aaPredicted RBP32.53■■■□□ 2.8
CPNE1-203ENST00000397442 B4E1Z4 1266 aa32.53■■■□□ 2.8
CPNE1-203ENST00000397442 CHST3Q7LGC8 479 aa32.53■■■□□ 2.8
CPNE1-203ENST00000397442 MTMR14Q8NCE2 650 aa32.53■■■□□ 2.8
CPNE1-203ENST00000397442 TMX3Q96JJ7 454 aa32.53■■■□□ 2.8
CPNE1-203ENST00000397442 LARP6Q9BRS8 491 aaKnown RBP32.53■■■□□ 2.8
CPNE1-203ENST00000397442 LRRC2Q9BYS8 371 aa32.53■■■□□ 2.8
CPNE1-203ENST00000397442 CNNM2Q9H8M5 875 aa32.53■■■□□ 2.8
CPNE1-203ENST00000397442 ROBO3Q96MS0 1386 aa32.52■■■□□ 2.8
CPNE1-203ENST00000397442 SHTN1A0MZ66 631 aa32.52■■■□□ 2.8
CPNE1-203ENST00000397442 MCM5P33992 734 aa32.52■■■□□ 2.8
CPNE1-203ENST00000397442 PICALMQ13492 652 aa32.52■■■□□ 2.8
CPNE1-203ENST00000397442 SLC4A8Q2Y0W8 1093 aa32.52■■■□□ 2.8
CPNE1-203ENST00000397442 IDI2Q9BXS1 227 aa32.52■■■□□ 2.8
CPNE1-203ENST00000397442 AGXT2Q9BYV1 514 aa32.52■■■□□ 2.8
CPNE1-203ENST00000397442 TDRD3Q9H7E2 651 aaKnown RBP32.52■■■□□ 2.8
CPNE1-203ENST00000397442 DDX52Q9Y2R4 599 aaKnown RBP eCLIP32.52■■■□□ 2.8
CPNE1-203ENST00000397442 GMPSP49915 693 aaPredicted RBP32.51■■■□□ 2.79
CPNE1-203ENST00000397442 PLCD1P51178 756 aa32.51■■■□□ 2.79
CPNE1-203ENST00000397442 Q6ZUG5 572 aa32.51■■■□□ 2.79
CPNE1-203ENST00000397442 CYB5R4Q7L1T6 521 aa32.51■■■□□ 2.79
CPNE1-203ENST00000397442 ZBED3Q96IU2 234 aaPredicted RBP32.51■■■□□ 2.79
CPNE1-203ENST00000397442 KRT23Q9C075 422 aa32.51■■■□□ 2.79
CPNE1-203ENST00000397442 GJA3Q9Y6H8 435 aa32.51■■■□□ 2.79
CPNE1-203ENST00000397442 CACNB3P54284 484 aa32.5■■■□□ 2.79
CPNE1-203ENST00000397442 ZNF280AP59817 542 aaPredicted RBP32.5■■■□□ 2.79
CPNE1-203ENST00000397442 DLGAP5Q15398 846 aa32.5■■■□□ 2.79
CPNE1-203ENST00000397442 DPF2Q92785 391 aa32.5■■■□□ 2.79
CPNE1-203ENST00000397442 LIMCH1Q9UPQ0 1083 aa32.5■■■□□ 2.79
CPNE1-203ENST00000397442 WDR19Q8NEZ3 1342 aa32.5■■■□□ 2.79
CPNE1-203ENST00000397442 PRC1O43663 620 aa32.5■■■□□ 2.79
CPNE1-203ENST00000397442 PCP11498 1178 aaKnown RBP32.5■■■□□ 2.79
CPNE1-203ENST00000397442 FBXL16Q8N461 479 aa32.5■■■□□ 2.79
CPNE1-203ENST00000397442 POLR3DP05423 398 aaPredicted RBP32.49■■■□□ 2.79
CPNE1-203ENST00000397442 MMP14P50281 582 aa32.49■■■□□ 2.79
CPNE1-203ENST00000397442 ANKRD1Q15327 319 aa32.49■■■□□ 2.79
CPNE1-203ENST00000397442 OSBPL5Q9H0X9 879 aaPredicted RBP32.49■■■□□ 2.79
CPNE1-203ENST00000397442 FAM198AQ9UFP1 575 aa32.49■■■□□ 2.79
CPNE1-203ENST00000397442 KDM4AO75164 1064 aa32.48■■■□□ 2.79
CPNE1-203ENST00000397442 NPM3O75607 178 aaKnown RBP32.48■■■□□ 2.79
CPNE1-203ENST00000397442 AMOTL1Q8IY63 956 aa32.48■■■□□ 2.79
CPNE1-203ENST00000397442 RNF181Q9P0P0 153 aa32.48■■■□□ 2.79
CPNE1-203ENST00000397442 ZSWIM5Q9P217 1185 aa32.48■■■□□ 2.79
CPNE1-203ENST00000397442 TPCN1Q9ULQ1 816 aa32.48■■■□□ 2.79
CPNE1-203ENST00000397442 ORC4O43929 436 aa32.47■■■□□ 2.79
CPNE1-203ENST00000397442 MYOZ2Q9NPC6 264 aa32.47■■■□□ 2.79
CPNE1-203ENST00000397442 LARGE1O95461 756 aa32.46■■■□□ 2.79
CPNE1-203ENST00000397442 SLC3A2P08195 630 aaKnown RBP32.46■■■□□ 2.79
CPNE1-203ENST00000397442 GPR162Q16538 588 aa32.46■■■□□ 2.79
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms