RNA–Protein interactions for RNA: ENST00000396060.6

GTF2A2-202, Transcript of general transcription factor IIA subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A2, Length 1,582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A2-202ENST00000396060 CCDC93Q567U6 631 aa14□□□□□ -0.17
GTF2A2-202ENST00000396060 TMTC2Q8N394 836 aa14□□□□□ -0.17
GTF2A2-202ENST00000396060 CERS5Q8N5B7 392 aa14□□□□□ -0.17
GTF2A2-202ENST00000396060 RGS22Q8NE09 1264 aa14□□□□□ -0.17
GTF2A2-202ENST00000396060 SGIP1Q9BQI5 828 aa14□□□□□ -0.17
GTF2A2-202ENST00000396060 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14□□□□□ -0.17
GTF2A2-202ENST00000396060 DDX11L8A8MPP1 907 aa13.99□□□□□ -0.17
GTF2A2-202ENST00000396060 BAG4O95429 457 aaKnown RBP13.99□□□□□ -0.17
GTF2A2-202ENST00000396060 RHBDL3P58872 404 aa13.99□□□□□ -0.17
GTF2A2-202ENST00000396060 NBR1Q14596 966 aa13.99□□□□□ -0.17
GTF2A2-202ENST00000396060 DOK7Q18PE1 504 aa13.99□□□□□ -0.17
GTF2A2-202ENST00000396060 C12orf60Q5U649 245 aa13.99□□□□□ -0.17
GTF2A2-202ENST00000396060 CHST3Q7LGC8 479 aa13.99□□□□□ -0.17
GTF2A2-202ENST00000396060 NKX2-3Q8TAU0 364 aa13.99□□□□□ -0.17
GTF2A2-202ENST00000396060 SH3RF3Q8TEJ3 882 aaPredicted RBP13.99□□□□□ -0.17
GTF2A2-202ENST00000396060 BRPF3Q9ULD4 1205 aa13.99□□□□□ -0.17
GTF2A2-202ENST00000396060 MINDY4BA8MYZ0 360 aa13.98□□□□□ -0.17
GTF2A2-202ENST00000396060 G3V3G9 751 aa13.98□□□□□ -0.17
GTF2A2-202ENST00000396060 STX6O43752 255 aa13.98□□□□□ -0.17
GTF2A2-202ENST00000396060 DHX16O60231 1041 aaKnown RBP13.98□□□□□ -0.17
GTF2A2-202ENST00000396060 KDM4AO75164 1064 aa13.98□□□□□ -0.17
GTF2A2-202ENST00000396060 SLC3A2P08195 630 aaKnown RBP13.98□□□□□ -0.17
GTF2A2-202ENST00000396060 BTDP43251 543 aa13.98□□□□□ -0.17
GTF2A2-202ENST00000396060 HMGN5P82970 282 aaKnown RBP13.98□□□□□ -0.17
GTF2A2-202ENST00000396060 DACT2Q5SW24 774 aa13.98□□□□□ -0.17
GTF2A2-202ENST00000396060 DCAF8Q5TAQ9 597 aa13.98□□□□□ -0.17
GTF2A2-202ENST00000396060 ESR2Q92731 530 aa13.98□□□□□ -0.17
GTF2A2-202ENST00000396060 GPHNQ9NQX3 736 aaPredicted RBP13.98□□□□□ -0.17
GTF2A2-202ENST00000396060 HPS5Q9UPZ3 1129 aa13.98□□□□□ -0.17
GTF2A2-202ENST00000396060 CD2APQ9Y5K6 639 aa13.98□□□□□ -0.17
GTF2A2-202ENST00000396060 BAZ2AQ9UIF9 1905 aaKnown RBP13.98□□□□□ -0.17
GTF2A2-202ENST00000396060 ROBO3Q96MS0 1386 aa13.98□□□□□ -0.17
GTF2A2-202ENST00000396060 C21orf2O43822 256 aa13.97□□□□□ -0.17
GTF2A2-202ENST00000396060 ECE2O60344 883 aa13.97□□□□□ -0.17
GTF2A2-202ENST00000396060 ZBTB7AO95365 584 aa13.97□□□□□ -0.17
GTF2A2-202ENST00000396060 ZSCAN22P10073 491 aaPredicted RBP13.97□□□□□ -0.17
GTF2A2-202ENST00000396060 SART3Q15020 963 aaKnown RBP13.97□□□□□ -0.17
GTF2A2-202ENST00000396060 NSUN7Q8NE18 718 aaKnown RBP13.97□□□□□ -0.17
GTF2A2-202ENST00000396060 LY9Q9HBG7 655 aa13.97□□□□□ -0.17
GTF2A2-202ENST00000396060 INCENPQ9NQS7 918 aa13.97□□□□□ -0.17
GTF2A2-202ENST00000396060 PIM2Q9P1W9 311 aa13.97□□□□□ -0.17
GTF2A2-202ENST00000396060 DAGLAQ9Y4D2 1042 aa13.97□□□□□ -0.17
GTF2A2-202ENST00000396060 NID2Q14112 1375 aa13.97□□□□□ -0.17
GTF2A2-202ENST00000396060 KLF18A0A0U1RQI7 1052 aa13.96□□□□□ -0.17
GTF2A2-202ENST00000396060 USP17L3A6NCW0 530 aa13.96□□□□□ -0.17
GTF2A2-202ENST00000396060 USP17L4A6NCW7 530 aa13.96□□□□□ -0.17
GTF2A2-202ENST00000396060 CTDNEP1O95476 244 aa13.96□□□□□ -0.17
GTF2A2-202ENST00000396060 STK3Q13188 491 aa13.96□□□□□ -0.17
GTF2A2-202ENST00000396060 USP17L1Q7RTZ2 530 aa13.96□□□□□ -0.17
GTF2A2-202ENST00000396060 MTMR6Q9Y217 621 aa13.96□□□□□ -0.17
GTF2A2-202ENST00000396060 IFIT3O14879 490 aaKnown RBP13.96□□□□□ -0.18
GTF2A2-202ENST00000396060 USP5P45974 858 aa13.96□□□□□ -0.18
GTF2A2-202ENST00000396060 PDE4BQ07343 736 aa13.96□□□□□ -0.18
GTF2A2-202ENST00000396060 PPP2R5BQ15173 497 aa13.96□□□□□ -0.18
GTF2A2-202ENST00000396060 SEC23AQ15436 765 aa13.96□□□□□ -0.18
GTF2A2-202ENST00000396060 TMEM67Q5HYA8 995 aa13.96□□□□□ -0.18
GTF2A2-202ENST00000396060 LARP1BQ659C4 914 aaKnown RBP13.96□□□□□ -0.18
GTF2A2-202ENST00000396060 DBNDD1Q9H9R9 158 aa13.96□□□□□ -0.18
GTF2A2-202ENST00000396060 MCM9Q9NXL9 1143 aa13.96□□□□□ -0.18
GTF2A2-202ENST00000396060 TTF2Q9UNY4 1162 aaKnown RBP13.96□□□□□ -0.18
GTF2A2-202ENST00000396060 ATF5Q9Y2D1 282 aaPredicted RBP13.96□□□□□ -0.18
GTF2A2-202ENST00000396060 KIF3AQ9Y496 699 aa13.96□□□□□ -0.18
GTF2A2-202ENST00000396060 ZNF646O15015 1829 aaPredicted RBP13.95□□□□□ -0.18
GTF2A2-202ENST00000396060 LAMB1P07942 1786 aa13.95□□□□□ -0.18
GTF2A2-202ENST00000396060 SCN9AQ15858 1988 aa13.95□□□□□ -0.18
GTF2A2-202ENST00000396060 CYP2D7A0A087X1C5 515 aa13.95□□□□□ -0.18
GTF2A2-202ENST00000396060 GOLGA6L22H0YM25 854 aa13.95□□□□□ -0.18
GTF2A2-202ENST00000396060 NPM3O75607 178 aaKnown RBP13.95□□□□□ -0.18
GTF2A2-202ENST00000396060 R3HDM1Q15032 1099 aaKnown RBP13.95□□□□□ -0.18
GTF2A2-202ENST00000396060 APOA5Q6Q788 366 aa13.95□□□□□ -0.18
GTF2A2-202ENST00000396060 AMOTL1Q8IY63 956 aa13.95□□□□□ -0.18
GTF2A2-202ENST00000396060 TEX11Q8IYF3 940 aa13.95□□□□□ -0.18
GTF2A2-202ENST00000396060 TGFBRAP1Q8WUH2 860 aa13.95□□□□□ -0.18
GTF2A2-202ENST00000396060 ZDHHC15Q96MV8 337 aa13.95□□□□□ -0.18
GTF2A2-202ENST00000396060 TAOK2Q9UL54 1235 aa13.95□□□□□ -0.18
GTF2A2-202ENST00000396060 ATP6V1DQ9Y5K8 247 aa13.95□□□□□ -0.18
GTF2A2-202ENST00000396060 CDK5RAP2Q96SN8 1893 aa13.94□□□□□ -0.18
GTF2A2-202ENST00000396060 F13A1P00488 732 aa13.94□□□□□ -0.18
GTF2A2-202ENST00000396060 USP17L8P0C7I0 530 aa13.94□□□□□ -0.18
GTF2A2-202ENST00000396060 AOC3Q16853 763 aa13.94□□□□□ -0.18
GTF2A2-202ENST00000396060 SKOR2Q2VWA4 1001 aaPredicted RBP13.94□□□□□ -0.18
GTF2A2-202ENST00000396060 APOBEC3HQ6NTF7 200 aaKnown RBP13.94□□□□□ -0.18
GTF2A2-202ENST00000396060 ANKS1AQ92625 1134 aa13.94□□□□□ -0.18
GTF2A2-202ENST00000396060 TEKT1Q969V4 418 aa13.94□□□□□ -0.18
GTF2A2-202ENST00000396060 KCNQ5Q9NR82 932 aa13.94□□□□□ -0.18
GTF2A2-202ENST00000396060 ZNF219Q9P2Y4 722 aaPredicted RBP13.94□□□□□ -0.18
GTF2A2-202ENST00000396060 ERICH2A1L162 156 aa13.93□□□□□ -0.18
GTF2A2-202ENST00000396060 GOLGA8BA8MQT2 603 aa13.93□□□□□ -0.18
GTF2A2-202ENST00000396060 SMIM22K7EJ46 135 aa13.93□□□□□ -0.18
GTF2A2-202ENST00000396060 ZBTB43O43298 467 aa13.93□□□□□ -0.18
GTF2A2-202ENST00000396060 PPIP5K2O43314 1243 aa13.93□□□□□ -0.18
GTF2A2-202ENST00000396060 JAK2O60674 1132 aa13.93□□□□□ -0.18
GTF2A2-202ENST00000396060 PTGER2P43116 358 aa13.93□□□□□ -0.18
GTF2A2-202ENST00000396060 CCT2P78371 535 aaKnown RBP13.93□□□□□ -0.18
GTF2A2-202ENST00000396060 WTAPQ15007 396 aa13.93□□□□□ -0.18
GTF2A2-202ENST00000396060 CCDC178Q5BJE1 867 aa13.93□□□□□ -0.18
GTF2A2-202ENST00000396060 DALRD3Q5D0E6 543 aaKnown RBP13.93□□□□□ -0.18
GTF2A2-202ENST00000396060 ZSCAN10Q96SZ4 725 aaPredicted RBP13.93□□□□□ -0.18
GTF2A2-202ENST00000396060 UBAC1Q9BSL1 405 aa13.93□□□□□ -0.18
GTF2A2-202ENST00000396060 ZNF287Q9HBT7 754 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 117.6 ms