RNA–Protein interactions for RNA: ENST00000389194.6

LTN1-202, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 7,749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-202ENST00000389194 GPKOWQ92917 476 aaPredicted RBP eCLIP5.63□□□□□ -1.513e-6■■■■■ 32.9
LTN1-202ENST00000389194 INCENPQ9NQS7 918 aa5.63□□□□□ -1.51
LTN1-202ENST00000389194 NDUFA8P51970 172 aa5.63□□□□□ -1.51
LTN1-202ENST00000389194 CCDC50Q8IVM0 306 aa5.63□□□□□ -1.51
LTN1-202ENST00000389194 NOC4LQ9BVI4 516 aaKnown RBP5.63□□□□□ -1.51
LTN1-202ENST00000389194 SLC52A2Q9HAB3 445 aa5.63□□□□□ -1.51
LTN1-202ENST00000389194 FAM207AQ9NSI2 230 aaPredicted RBP5.63□□□□□ -1.51
LTN1-202ENST00000389194 SPATA31E1Q6ZUB1 1445 aa5.63□□□□□ -1.51
LTN1-202ENST00000389194 WDHD1O75717 1129 aaPredicted RBP5.63□□□□□ -1.51
LTN1-202ENST00000389194 PLBD2Q8NHP8 589 aa5.63□□□□□ -1.51
LTN1-202ENST00000389194 TGFBRAP1Q8WUH2 860 aa5.63□□□□□ -1.51
LTN1-202ENST00000389194 ZC3H12CQ9C0D7 883 aaKnown RBP5.63□□□□□ -1.51
LTN1-202ENST00000389194 BTBD18B2RXH4 712 aa5.63□□□□□ -1.51
LTN1-202ENST00000389194 UBAP1LF5GYI3 381 aa5.63□□□□□ -1.51
LTN1-202ENST00000389194 ZMYND10O75800 440 aa5.63□□□□□ -1.51
LTN1-202ENST00000389194 MRPS25P82663 173 aaKnown RBP5.63□□□□□ -1.51
LTN1-202ENST00000389194 ANKRD13CQ8N6S4 541 aa5.63□□□□□ -1.51
LTN1-202ENST00000389194 GINS2Q9Y248 185 aa5.63□□□□□ -1.51
LTN1-202ENST00000389194 KIF21AQ7Z4S6 1674 aa5.63□□□□□ -1.51
LTN1-202ENST00000389194 ELP1O95163 1332 aa5.63□□□□□ -1.51
LTN1-202ENST00000389194 GIGYF1O75420 1035 aaPredicted RBP5.63□□□□□ -1.51
LTN1-202ENST00000389194 SCRN1Q12765 414 aa5.63□□□□□ -1.51
LTN1-202ENST00000389194 TEX11Q8IYF3 940 aa5.63□□□□□ -1.51
LTN1-202ENST00000389194 RASGRP4Q8TDF6 673 aa5.63□□□□□ -1.51
LTN1-202ENST00000389194 UBLCP1Q8WVY7 318 aaPredicted RBP5.63□□□□□ -1.51
LTN1-202ENST00000389194 RRP36Q96EU6 259 aaKnown RBP5.63□□□□□ -1.51
LTN1-202ENST00000389194 NUP160Q12769 1436 aa5.63□□□□□ -1.51
LTN1-202ENST00000389194 A0A1W2PRG0 241 aa5.62□□□□□ -1.51
LTN1-202ENST00000389194 KRT79Q5XKE5 535 aa5.62□□□□□ -1.51
LTN1-202ENST00000389194 HOOK3Q86VS8 718 aa5.62□□□□□ -1.51
LTN1-202ENST00000389194 KLHL7Q8IXQ5 586 aa5.62□□□□□ -1.51
LTN1-202ENST00000389194 NEK11Q8NG66 645 aa5.62□□□□□ -1.51
LTN1-202ENST00000389194 ABCC4O15439 1325 aa5.62□□□□□ -1.51
LTN1-202ENST00000389194 FRMPD2Q68DX3 1309 aaPredicted RBP5.62□□□□□ -1.51
LTN1-202ENST00000389194 UFL1O94874 794 aa5.62□□□□□ -1.51
LTN1-202ENST00000389194 FGAP02671 866 aa5.62□□□□□ -1.51
LTN1-202ENST00000389194 KRT9P35527 623 aa5.62□□□□□ -1.51
LTN1-202ENST00000389194 MSL1Q68DK7 614 aa5.62□□□□□ -1.51
LTN1-202ENST00000389194 CPXCR1Q8N123 301 aa5.62□□□□□ -1.51
LTN1-202ENST00000389194 IQUBQ8NA54 791 aa5.62□□□□□ -1.51
LTN1-202ENST00000389194 APPBP2Q92624 585 aa5.62□□□□□ -1.51
LTN1-202ENST00000389194 NAA15Q9BXJ9 866 aaKnown RBP5.62□□□□□ -1.51
LTN1-202ENST00000389194 SYNCQ9H7C4 482 aa5.62□□□□□ -1.51
LTN1-202ENST00000389194 RMND1Q9NWS8 449 aa5.62□□□□□ -1.51
LTN1-202ENST00000389194 ZNF215Q9UL58 517 aaPredicted RBP5.62□□□□□ -1.51
LTN1-202ENST00000389194 TRPM2O94759 1503 aa5.62□□□□□ -1.51
LTN1-202ENST00000389194 SPDYE3A6NKU9 549 aa5.62□□□□□ -1.51
LTN1-202ENST00000389194 TACC1O75410 805 aa5.62□□□□□ -1.51
LTN1-202ENST00000389194 CHGBP05060 677 aa5.62□□□□□ -1.51
LTN1-202ENST00000389194 POTEJP0CG39 1038 aa5.62□□□□□ -1.51
LTN1-202ENST00000389194 ST5P78524 1137 aa5.62□□□□□ -1.51
LTN1-202ENST00000389194 GRIPAP1Q4V328 841 aa5.62□□□□□ -1.51
LTN1-202ENST00000389194 CCDC174Q6PII3 467 aa5.62□□□□□ -1.51
LTN1-202ENST00000389194 FAM114A1Q8IWE2 563 aa5.62□□□□□ -1.51
LTN1-202ENST00000389194 TMTC2Q8N394 836 aa5.62□□□□□ -1.51
LTN1-202ENST00000389194 BIN2Q9UBW5 565 aaPredicted RBP5.62□□□□□ -1.51
LTN1-202ENST00000389194 DISP1Q96F81 1524 aa5.62□□□□□ -1.51
LTN1-202ENST00000389194 USP17L12C9JPN9 530 aa5.62□□□□□ -1.51
LTN1-202ENST00000389194 USP17L21D6R901 530 aa5.62□□□□□ -1.51
LTN1-202ENST00000389194 PFKFB1P16118 471 aa5.62□□□□□ -1.51
LTN1-202ENST00000389194 GSTA5Q7RTV2 222 aa5.62□□□□□ -1.51
LTN1-202ENST00000389194 CSGALNACT2Q8N6G5 542 aa5.62□□□□□ -1.51
LTN1-202ENST00000389194 FANCLQ9NW38 375 aa5.62□□□□□ -1.51
LTN1-202ENST00000389194 DBNLQ9UJU6 430 aaKnown RBP5.62□□□□□ -1.51
LTN1-202ENST00000389194 ZNF518AQ6AHZ1 1483 aa5.62□□□□□ -1.51
LTN1-202ENST00000389194 WDR7Q9Y4E6 1490 aa5.62□□□□□ -1.51
LTN1-202ENST00000389194 CYP2D7A0A087X1C5 515 aa5.62□□□□□ -1.51
LTN1-202ENST00000389194 KRT86O43790 486 aa5.62□□□□□ -1.51
LTN1-202ENST00000389194 HSPD1P10809 573 aaKnown RBP5.62□□□□□ -1.51
LTN1-202ENST00000389194 SYNE4Q8N205 404 aa5.62□□□□□ -1.51
LTN1-202ENST00000389194 CTAGE1Q96RT6 745 aa5.62□□□□□ -1.51
LTN1-202ENST00000389194 C6orf50Q9HD87 102 aa5.62□□□□□ -1.51
LTN1-202ENST00000389194 KCNK9Q9NPC2 374 aa5.62□□□□□ -1.51
LTN1-202ENST00000389194 HELLSQ9NRZ9 838 aa5.62□□□□□ -1.51
LTN1-202ENST00000389194 RTCBQ9Y3I0 505 aaKnown RBP5.62□□□□□ -1.51
LTN1-202ENST00000389194 SYNRGQ9UMZ2 1314 aa5.62□□□□□ -1.51
LTN1-202ENST00000389194 GOLGA6L9A6NEM1 432 aa5.62□□□□□ -1.51
LTN1-202ENST00000389194 TPTE2Q6XPS3 522 aa5.62□□□□□ -1.51
LTN1-202ENST00000389194 BRAPQ7Z569 592 aa5.62□□□□□ -1.51
LTN1-202ENST00000389194 CEP112Q8N8E3 955 aa5.62□□□□□ -1.51
LTN1-202ENST00000389194 UHMK1Q8TAS1 419 aaKnown RBP5.62□□□□□ -1.51
LTN1-202ENST00000389194 CCDC97Q96F63 343 aaPredicted RBP5.62□□□□□ -1.51
LTN1-202ENST00000389194 PUS7Q96PZ0 661 aaKnown RBP5.62□□□□□ -1.51
LTN1-202ENST00000389194 C19orf44Q9H6X5 657 aa5.62□□□□□ -1.51
LTN1-202ENST00000389194 FAM13AO94988 1023 aa5.61□□□□□ -1.51
LTN1-202ENST00000389194 CAVIN2O95810 425 aa5.61□□□□□ -1.51
LTN1-202ENST00000389194 POSTNQ15063 836 aa5.61□□□□□ -1.51
LTN1-202ENST00000389194 TYW1BQ6NUM6 668 aa5.61□□□□□ -1.51
LTN1-202ENST00000389194 TAB3Q8N5C8 712 aaPredicted RBP5.61□□□□□ -1.51
LTN1-202ENST00000389194 SPATA5Q8NB90 893 aa5.61□□□□□ -1.51
LTN1-202ENST00000389194 ASAP1Q9ULH1 1129 aa5.61□□□□□ -1.51
LTN1-202ENST00000389194 ERBB4Q15303 1308 aa5.61□□□□□ -1.51
LTN1-202ENST00000389194 PHKA1P46020 1223 aa5.61□□□□□ -1.51
LTN1-202ENST00000389194 CETN1Q12798 172 aa5.61□□□□□ -1.51
LTN1-202ENST00000389194 TTC38Q5R3I4 469 aa5.61□□□□□ -1.51
LTN1-202ENST00000389194 C11orf57Q6ZUT1 292 aaPredicted RBP5.61□□□□□ -1.51
LTN1-202ENST00000389194 MYRIPQ8NFW9 859 aa5.61□□□□□ -1.51
LTN1-202ENST00000389194 GREM2Q9H772 168 aa5.61□□□□□ -1.51
LTN1-202ENST00000389194 SEC31AO94979 1220 aaKnown RBP5.61□□□□□ -1.51
LTN1-202ENST00000389194 PARP1P09874 1014 aaKnown RBP5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms