RNA–Protein interactions for RNA: ENST00000376545.7

ABCF1-202, Transcript of ATP binding cassette subfamily F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ABCF1, Length 3,131 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-202ENST00000376545 IFNL3Q8IZI9 196 aa12.33□□□□□ -0.44
ABCF1-202ENST00000376545 TMX1Q9H3N1 280 aa12.33□□□□□ -0.44
ABCF1-202ENST00000376545 TUBB4AP04350 444 aa12.33□□□□□ -0.44
ABCF1-202ENST00000376545 MARCKSP29966 332 aaPredicted RBP12.33□□□□□ -0.44
ABCF1-202ENST00000376545 IL6STP40189 918 aaPredicted RBP12.33□□□□□ -0.44
ABCF1-202ENST00000376545 PHKBQ93100 1093 aa12.33□□□□□ -0.44
ABCF1-202ENST00000376545 L2HGDHQ9H9P8 463 aa12.33□□□□□ -0.44
ABCF1-202ENST00000376545 ZSWIM5Q9P217 1185 aa12.33□□□□□ -0.44
ABCF1-202ENST00000376545 CGNQ9P2M7 1197 aaKnown RBP12.33□□□□□ -0.44
ABCF1-202ENST00000376545 TRMT112Q9UI30 125 aaKnown RBP12.33□□□□□ -0.44
ABCF1-202ENST00000376545 ZNF330Q9Y3S2 320 aaPredicted RBP12.33□□□□□ -0.44
ABCF1-202ENST00000376545 IDH1O75874 414 aaKnown RBP12.33□□□□□ -0.44
ABCF1-202ENST00000376545 IFNAR1P17181 557 aa12.33□□□□□ -0.44
ABCF1-202ENST00000376545 IARSP41252 1262 aaKnown RBP12.33□□□□□ -0.44
ABCF1-202ENST00000376545 TPM4P67936 248 aa12.33□□□□□ -0.44
ABCF1-202ENST00000376545 FANCCQ00597 558 aa12.33□□□□□ -0.44
ABCF1-202ENST00000376545 DMTNQ08495 405 aa12.33□□□□□ -0.44
ABCF1-202ENST00000376545 SPATA5Q8NB90 893 aa12.33□□□□□ -0.44
ABCF1-202ENST00000376545 ZBTB1Q9Y2K1 713 aa12.33□□□□□ -0.44
ABCF1-202ENST00000376545 MORC2Q9Y6X9 1032 aaPredicted RBP12.33□□□□□ -0.44
ABCF1-202ENST00000376545 PNPLA7Q6ZV29 1317 aa12.32□□□□□ -0.44
ABCF1-202ENST00000376545 DLEC1Q9Y238 1755 aa12.32□□□□□ -0.44
ABCF1-202ENST00000376545 GSG1L2A8MUP6 293 aa12.32□□□□□ -0.44
ABCF1-202ENST00000376545 RCAN1P53805 252 aa12.32□□□□□ -0.44
ABCF1-202ENST00000376545 ZRSR1Q15695 479 aaKnown RBP12.32□□□□□ -0.44
ABCF1-202ENST00000376545 METTL16Q86W50 562 aaKnown RBP12.32□□□□□ -0.44
ABCF1-202ENST00000376545 CNNM2Q9H8M5 875 aa12.32□□□□□ -0.44
ABCF1-202ENST00000376545 BCL9LQ86UU0 1499 aa12.32□□□□□ -0.44
ABCF1-202ENST00000376545 DOT1LQ8TEK3 1739 aa12.32□□□□□ -0.44
ABCF1-202ENST00000376545 RTL9Q8NET4 1388 aa12.32□□□□□ -0.44
ABCF1-202ENST00000376545 CCDC93Q567U6 631 aa12.32□□□□□ -0.44
ABCF1-202ENST00000376545 NT5DC1Q5TFE4 455 aa12.32□□□□□ -0.44
ABCF1-202ENST00000376545 FOXP4Q8IVH2 680 aaPredicted RBP12.32□□□□□ -0.44
ABCF1-202ENST00000376545 STAG1Q8WVM7 1258 aa12.32□□□□□ -0.44
ABCF1-202ENST00000376545 AIDAQ96BJ3 306 aa12.32□□□□□ -0.44
ABCF1-202ENST00000376545 PPP1R13BQ96KQ4 1090 aa12.32□□□□□ -0.44
ABCF1-202ENST00000376545 BIN1O00499 593 aa12.31□□□□□ -0.44
ABCF1-202ENST00000376545 RXRAP19793 462 aa12.31□□□□□ -0.44
ABCF1-202ENST00000376545 NAA30Q147X3 362 aaPredicted RBP12.31□□□□□ -0.44
ABCF1-202ENST00000376545 TMEM67Q5HYA8 995 aa12.31□□□□□ -0.44
ABCF1-202ENST00000376545 KRBA2Q6ZNG9 492 aa12.31□□□□□ -0.44
ABCF1-202ENST00000376545 TMC6Q7Z403 805 aa12.31□□□□□ -0.44
ABCF1-202ENST00000376545 FAM53CQ9NYF3 392 aa12.31□□□□□ -0.44
ABCF1-202ENST00000376545 OGFRQ9NZT2 677 aa12.31□□□□□ -0.44
ABCF1-202ENST00000376545 GOLGA8AA7E2F4 631 aa12.31□□□□□ -0.44
ABCF1-202ENST00000376545 TOB1P50616 345 aaPredicted RBP12.31□□□□□ -0.44
ABCF1-202ENST00000376545 CBX1P83916 185 aa12.31□□□□□ -0.44
ABCF1-202ENST00000376545 RASGRF1Q13972 1273 aa12.31□□□□□ -0.44
ABCF1-202ENST00000376545 AKNAD1Q5T1N1 836 aa12.31□□□□□ -0.44
ABCF1-202ENST00000376545 MICU3Q86XE3 530 aa12.31□□□□□ -0.44
ABCF1-202ENST00000376545 KIF18AQ8NI77 898 aa12.31□□□□□ -0.44
ABCF1-202ENST00000376545 FBXW7Q969H0 707 aa12.31□□□□□ -0.44
ABCF1-202ENST00000376545 ERO1AQ96HE7 468 aa12.31□□□□□ -0.44
ABCF1-202ENST00000376545 KRT23Q9C075 422 aa12.31□□□□□ -0.44
ABCF1-202ENST00000376545 INCENPQ9NQS7 918 aa12.31□□□□□ -0.44
ABCF1-202ENST00000376545 SMC2O95347 1197 aa12.31□□□□□ -0.44
ABCF1-202ENST00000376545 MMP1P03956 469 aa12.31□□□□□ -0.44
ABCF1-202ENST00000376545 APPP05067 770 aa12.31□□□□□ -0.44
ABCF1-202ENST00000376545 MYL5Q02045 173 aa12.31□□□□□ -0.44
ABCF1-202ENST00000376545 SSRP1Q08945 709 aaKnown RBP12.31□□□□□ -0.44
ABCF1-202ENST00000376545 LONRF3Q496Y0 759 aa12.31□□□□□ -0.44
ABCF1-202ENST00000376545 NOSTRINQ8IVI9 506 aa12.31□□□□□ -0.44
ABCF1-202ENST00000376545 STK11IPQ8N1F8 1099 aa12.31□□□□□ -0.44
ABCF1-202ENST00000376545 DDX41Q9UJV9 622 aaKnown RBP12.31□□□□□ -0.44
ABCF1-202ENST00000376545 ZNF215Q9UL58 517 aaPredicted RBP12.31□□□□□ -0.44
ABCF1-202ENST00000376545 MYH6P13533 1939 aa12.3□□□□□ -0.44
ABCF1-202ENST00000376545 GNAT2P19087 354 aa12.3□□□□□ -0.44
ABCF1-202ENST00000376545 SFPQP23246 707 aaKnown RBP eCLIP12.3□□□□□ -0.44
ABCF1-202ENST00000376545 MAP3K12Q12852 859 aa12.3□□□□□ -0.44
ABCF1-202ENST00000376545 PNOCQ13519 176 aa12.3□□□□□ -0.44
ABCF1-202ENST00000376545 WASF1Q92558 559 aa12.3□□□□□ -0.44
ABCF1-202ENST00000376545 TRMT1Q9NXH9 659 aaKnown RBP12.3□□□□□ -0.44
ABCF1-202ENST00000376545 ZHX1Q9UKY1 873 aaPredicted RBP12.3□□□□□ -0.44
ABCF1-202ENST00000376545 CASZ1Q86V15 1759 aa12.3□□□□□ -0.44
ABCF1-202ENST00000376545 UBE2Q2LH0YL09 131 aa12.3□□□□□ -0.44
ABCF1-202ENST00000376545 ATP1A3P13637 1013 aa12.3□□□□□ -0.44
ABCF1-202ENST00000376545 SLC5A1P13866 664 aa12.3□□□□□ -0.44
ABCF1-202ENST00000376545 BMP6P22004 513 aa12.3□□□□□ -0.44
ABCF1-202ENST00000376545 SARSP49591 514 aaKnown RBP12.3□□□□□ -0.44
ABCF1-202ENST00000376545 DZIP3Q86Y13 1208 aaKnown RBP12.3□□□□□ -0.44
ABCF1-202ENST00000376545 MAGEB6Q8N7X4 407 aa12.3□□□□□ -0.44
ABCF1-202ENST00000376545 ZNF579Q8NAF0 562 aaKnown RBP12.3□□□□□ -0.44
ABCF1-202ENST00000376545 CLIC6Q96NY7 704 aa12.3□□□□□ -0.44
ABCF1-202ENST00000376545 GTPBP4Q9BZE4 634 aaKnown RBP12.3□□□□□ -0.44
ABCF1-202ENST00000376545 FOXP1Q9H334 677 aaPredicted RBP12.3□□□□□ -0.44
ABCF1-202ENST00000376545 KCNH3Q9ULD8 1083 aa12.3□□□□□ -0.44
ABCF1-202ENST00000376545 SLC12A7Q9Y666 1083 aa12.3□□□□□ -0.44
ABCF1-202ENST00000376545 COL16A1Q07092 1604 aaPredicted RBP12.3□□□□□ -0.44
ABCF1-202ENST00000376545 CBFA2T2O43439 604 aa12.29□□□□□ -0.44
ABCF1-202ENST00000376545 MBD4O95243 580 aa12.29□□□□□ -0.44
ABCF1-202ENST00000376545 CTDSPL2Q05D32 466 aa12.29□□□□□ -0.44
ABCF1-202ENST00000376545 VSTM4Q8IW00 320 aa12.29□□□□□ -0.44
ABCF1-202ENST00000376545 KRI1Q8N9T8 703 aaKnown RBP12.29□□□□□ -0.44
ABCF1-202ENST00000376545 NAPBQ9H115 298 aa12.29□□□□□ -0.44
ABCF1-202ENST00000376545 FBXO2Q9UK22 296 aaPredicted RBP12.29□□□□□ -0.44
ABCF1-202ENST00000376545 PTPREP23469 700 aa12.29□□□□□ -0.44
ABCF1-202ENST00000376545 LMOD1P29536 600 aaPredicted RBP12.29□□□□□ -0.44
ABCF1-202ENST00000376545 EIF5P55010 431 aaKnown RBP12.29□□□□□ -0.44
ABCF1-202ENST00000376545 TRIM29Q14134 588 aa12.29□□□□□ -0.44
ABCF1-202ENST00000376545 PAXIP1Q6ZW49 1069 aaPredicted RBP12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms