RNA–Protein interactions for RNA: ENST00000376259.6

TNFRSF1B-201, Transcript of TNF receptor superfamily member 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1B, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-201ENST00000376259 JAKMIP3Q5VZ66 844 aa16.43■□□□□ 0.22
TNFRSF1B-201ENST00000376259 COL15A1P39059 1388 aa16.43■□□□□ 0.22
TNFRSF1B-201ENST00000376259 BAZ2BQ9UIF8 2168 aaKnown RBP16.42■□□□□ 0.22
TNFRSF1B-201ENST00000376259 AXDND1Q5T1B0 1012 aaPredicted RBP16.42■□□□□ 0.22
TNFRSF1B-201ENST00000376259 CMA1P23946 247 aa16.42■□□□□ 0.22
TNFRSF1B-201ENST00000376259 CCZ1BP86790 482 aa16.42■□□□□ 0.22
TNFRSF1B-201ENST00000376259 CCZ1P86791 482 aaPredicted RBP16.42■□□□□ 0.22
TNFRSF1B-201ENST00000376259 ARFGAP3Q9NP61 516 aa16.42■□□□□ 0.22
TNFRSF1B-201ENST00000376259 SEC31BQ9NQW1 1179 aa16.42■□□□□ 0.22
TNFRSF1B-201ENST00000376259 GUCA1BQ9UMX6 200 aa16.42■□□□□ 0.22
TNFRSF1B-201ENST00000376259 TTF1Q15361 905 aaPredicted RBP16.42■□□□□ 0.22
TNFRSF1B-201ENST00000376259 E4F1Q66K89 784 aaPredicted RBP16.42■□□□□ 0.22
TNFRSF1B-201ENST00000376259 ZSWIM5Q9P217 1185 aa16.42■□□□□ 0.22
TNFRSF1B-201ENST00000376259 H7C1W4 665 aa16.41■□□□□ 0.22
TNFRSF1B-201ENST00000376259 POSTNQ15063 836 aa16.41■□□□□ 0.22
TNFRSF1B-201ENST00000376259 DHX37Q8IY37 1157 aaKnown RBP16.41■□□□□ 0.22
TNFRSF1B-201ENST00000376259 IGSF22Q8N9C0 903 aa16.41■□□□□ 0.22
TNFRSF1B-201ENST00000376259 ZHX3Q9H4I2 956 aa16.41■□□□□ 0.22
TNFRSF1B-201ENST00000376259 TRIM75PA6NK02 468 aa16.41■□□□□ 0.22
TNFRSF1B-201ENST00000376259 PPP2R3AQ06190 1150 aa16.41■□□□□ 0.22
TNFRSF1B-201ENST00000376259 SLC39A14Q15043 492 aa16.41■□□□□ 0.22
TNFRSF1B-201ENST00000376259 REREQ9P2R6 1566 aa16.41■□□□□ 0.22
TNFRSF1B-201ENST00000376259 GUCY1A2P33402 732 aa16.41■□□□□ 0.22
TNFRSF1B-201ENST00000376259 EXOSC10Q01780 885 aaKnown RBP16.41■□□□□ 0.22
TNFRSF1B-201ENST00000376259 IFIT1BQ5T764 474 aaKnown RBP16.41■□□□□ 0.22
TNFRSF1B-201ENST00000376259 USPL1Q5W0Q7 1092 aa16.41■□□□□ 0.22
TNFRSF1B-201ENST00000376259 IQCA1Q86XH1 822 aa16.41■□□□□ 0.22
TNFRSF1B-201ENST00000376259 CTCFLQ8NI51 663 aaPredicted RBP16.41■□□□□ 0.22
TNFRSF1B-201ENST00000376259 STX8Q9UNK0 236 aa16.41■□□□□ 0.22
TNFRSF1B-201ENST00000376259 SH3TC1Q8TE82 1336 aa16.41■□□□□ 0.22
TNFRSF1B-201ENST00000376259 KIAA1328Q86T90 577 aa16.4■□□□□ 0.22
TNFRSF1B-201ENST00000376259 NIP7Q9Y221 180 aaKnown RBP eCLIP16.4■□□□□ 0.22
TNFRSF1B-201ENST00000376259 CCDC196A0A1B0GTZ2 297 aa16.4■□□□□ 0.22
TNFRSF1B-201ENST00000376259 CLCN6P51797 869 aa16.4■□□□□ 0.22
TNFRSF1B-201ENST00000376259 GRIN1Q05586 938 aa16.4■□□□□ 0.22
TNFRSF1B-201ENST00000376259 USP49Q70CQ1 688 aa16.4■□□□□ 0.22
TNFRSF1B-201ENST00000376259 CATIPQ7Z7H3 387 aa16.4■□□□□ 0.22
TNFRSF1B-201ENST00000376259 PLEKHA4Q9H4M7 779 aa16.4■□□□□ 0.22
TNFRSF1B-201ENST00000376259 PCDHB6Q9Y5E3 794 aa16.4■□□□□ 0.22
TNFRSF1B-201ENST00000376259 FAM47AQ5JRC9 791 aa16.4■□□□□ 0.22
TNFRSF1B-201ENST00000376259 ATL3Q6DD88 541 aa16.4■□□□□ 0.22
TNFRSF1B-201ENST00000376259 IFNL3Q8IZI9 196 aa16.4■□□□□ 0.22
TNFRSF1B-201ENST00000376259 PPP2R2CQ9Y2T4 447 aa16.4■□□□□ 0.22
TNFRSF1B-201ENST00000376259 TSPY2A6NKD2 308 aa16.39■□□□□ 0.21
TNFRSF1B-201ENST00000376259 TXLNAP40222 546 aa16.39■□□□□ 0.21
TNFRSF1B-201ENST00000376259 KRBA2Q6ZNG9 492 aa16.39■□□□□ 0.21
TNFRSF1B-201ENST00000376259 TANGO6Q9C0B7 1094 aa16.39■□□□□ 0.21
TNFRSF1B-201ENST00000376259 TAB2Q9NYJ8 693 aa16.39■□□□□ 0.21
TNFRSF1B-201ENST00000376259 CTNND2Q9UQB3 1225 aa16.39■□□□□ 0.21
TNFRSF1B-201ENST00000376259 ZBTB1Q9Y2K1 713 aa16.39■□□□□ 0.21
TNFRSF1B-201ENST00000376259 MTF1Q14872 753 aa16.39■□□□□ 0.21
TNFRSF1B-201ENST00000376259 MAGEC2Q9UBF1 373 aaPredicted RBP16.39■□□□□ 0.21
TNFRSF1B-201ENST00000376259 CADPS2Q86UW7 1296 aa16.39■□□□□ 0.21
TNFRSF1B-201ENST00000376259 EPSTI1Q96J88 318 aa16.39■□□□□ 0.21
TNFRSF1B-201ENST00000376259 PSMB7Q99436 277 aa16.39■□□□□ 0.21
TNFRSF1B-201ENST00000376259 POLR3EQ9NVU0 708 aa16.39■□□□□ 0.21
TNFRSF1B-201ENST00000376259 CEP131Q9UPN4 1083 aa16.39■□□□□ 0.21
TNFRSF1B-201ENST00000376259 CCDC175P0C221 793 aa16.38■□□□□ 0.21
TNFRSF1B-201ENST00000376259 USP5P45974 858 aa16.38■□□□□ 0.21
TNFRSF1B-201ENST00000376259 GYG1P46976 350 aa16.38■□□□□ 0.21
TNFRSF1B-201ENST00000376259 SHC4Q6S5L8 630 aa16.38■□□□□ 0.21
TNFRSF1B-201ENST00000376259 PIK3AP1Q6ZUJ8 805 aa16.38■□□□□ 0.21
TNFRSF1B-201ENST00000376259 NOSTRINQ8IVI9 506 aa16.38■□□□□ 0.21
TNFRSF1B-201ENST00000376259 VPS18Q9P253 973 aa16.38■□□□□ 0.21
TNFRSF1B-201ENST00000376259 NPHP4O75161 1426 aaPredicted RBP16.38■□□□□ 0.21
TNFRSF1B-201ENST00000376259 PRR29P0C7W0 189 aa16.38■□□□□ 0.21
TNFRSF1B-201ENST00000376259 ANTXR2P58335 489 aa16.38■□□□□ 0.21
TNFRSF1B-201ENST00000376259 SPATA5Q8NB90 893 aa16.38■□□□□ 0.21
TNFRSF1B-201ENST00000376259 OXER1Q8TDS5 423 aa16.38■□□□□ 0.21
TNFRSF1B-201ENST00000376259 BTG4Q9NY30 223 aa16.38■□□□□ 0.21
TNFRSF1B-201ENST00000376259 FAM205CA6NFA0 338 aa16.38■□□□□ 0.21
TNFRSF1B-201ENST00000376259 SMIM5Q71RC9 77 aa16.38■□□□□ 0.21
TNFRSF1B-201ENST00000376259 KCNB2Q92953 911 aa16.38■□□□□ 0.21
TNFRSF1B-201ENST00000376259 SLF1Q9BQI6 1058 aa16.38■□□□□ 0.21
TNFRSF1B-201ENST00000376259 GNL3LQ9NVN8 582 aaKnown RBP16.38■□□□□ 0.21
TNFRSF1B-201ENST00000376259 A0A1W2PQ27 194 aa16.37■□□□□ 0.21
TNFRSF1B-201ENST00000376259 A0A1W2PQ64 194 aa16.37■□□□□ 0.21
TNFRSF1B-201ENST00000376259 A0A1W2PQD8 194 aa16.37■□□□□ 0.21
TNFRSF1B-201ENST00000376259 TSGA10IPQ3SY00 556 aa16.37■□□□□ 0.21
TNFRSF1B-201ENST00000376259 ILDR1Q86SU0 546 aaPredicted RBP16.37■□□□□ 0.21
TNFRSF1B-201ENST00000376259 ENGASEQ8NFI3 743 aa16.37■□□□□ 0.21
TNFRSF1B-201ENST00000376259 IMPACTQ9P2X3 320 aa16.37■□□□□ 0.21
TNFRSF1B-201ENST00000376259 DDX41Q9UJV9 622 aaKnown RBP16.37■□□□□ 0.21
TNFRSF1B-201ENST00000376259 MROH7-TTC4A0A0A0MT08 1334 aa16.37■□□□□ 0.21
TNFRSF1B-201ENST00000376259 NEDD4P46934 1319 aa16.37■□□□□ 0.21
TNFRSF1B-201ENST00000376259 SOWAHDA6NJG2 315 aa16.37■□□□□ 0.21
TNFRSF1B-201ENST00000376259 LEKR1Q6ZMV7 388 aa16.37■□□□□ 0.21
TNFRSF1B-201ENST00000376259 DEF6Q9H4E7 631 aa16.37■□□□□ 0.21
TNFRSF1B-201ENST00000376259 TECPR2O15040 1411 aa16.37■□□□□ 0.21
TNFRSF1B-201ENST00000376259 PCDH11XQ9BZA7 1347 aa16.37■□□□□ 0.21
TNFRSF1B-201ENST00000376259 PCDH11YQ9BZA8 1340 aa16.37■□□□□ 0.21
TNFRSF1B-201ENST00000376259 WWC2Q6AWC2 1192 aa16.37■□□□□ 0.21
TNFRSF1B-201ENST00000376259 CSRNP2Q9H175 543 aa16.37■□□□□ 0.21
TNFRSF1B-201ENST00000376259 TFCP2L1Q9NZI6 479 aa16.37■□□□□ 0.21
TNFRSF1B-201ENST00000376259 PRDM4Q9UKN5 801 aa16.37■□□□□ 0.21
TNFRSF1B-201ENST00000376259 CUTAO60888 179 aa16.36■□□□□ 0.21
TNFRSF1B-201ENST00000376259 KIF20AO95235 890 aa16.36■□□□□ 0.21
TNFRSF1B-201ENST00000376259 UQCRFS1P1P0C7P4 283 aa16.36■□□□□ 0.21
TNFRSF1B-201ENST00000376259 ANKRD7Q92527 254 aa16.36■□□□□ 0.21
TNFRSF1B-201ENST00000376259 ESR2Q92731 530 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms