RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 MYH7P12883 1935 aa16.77■□□□□ 0.28
MSH5-201ENST00000375703 SERPINC1P01008 464 aa16.77■□□□□ 0.28
MSH5-201ENST00000375703 MYL5Q02045 173 aa16.77■□□□□ 0.28
MSH5-201ENST00000375703 LONRF3Q496Y0 759 aa16.77■□□□□ 0.28
MSH5-201ENST00000375703 OLFM4Q6UX06 510 aa16.77■□□□□ 0.28
MSH5-201ENST00000375703 MAGEB6Q8N7X4 407 aa16.77■□□□□ 0.28
MSH5-201ENST00000375703 SPATA5Q8NB90 893 aa16.77■□□□□ 0.28
MSH5-201ENST00000375703 UBE2Q2LH0YL09 131 aa16.77■□□□□ 0.28
MSH5-201ENST00000375703 SLU7O95391 586 aaKnown RBP16.77■□□□□ 0.28
MSH5-201ENST00000375703 KCNJ6P48051 423 aa16.77■□□□□ 0.28
MSH5-201ENST00000375703 MAP3K12Q12852 859 aa16.77■□□□□ 0.28
MSH5-201ENST00000375703 UTP14CQ5TAP6 766 aaKnown RBP16.77■□□□□ 0.28
MSH5-201ENST00000375703 CNNM3Q8NE01 707 aa16.77■□□□□ 0.28
MSH5-201ENST00000375703 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.77■□□□□ 0.28
MSH5-201ENST00000375703 KCNH3Q9ULD8 1083 aa16.77■□□□□ 0.28
MSH5-201ENST00000375703 ZBTB1Q9Y2K1 713 aa16.77■□□□□ 0.28
MSH5-201ENST00000375703 V9GYY5 206 aaPredicted RBP16.77■□□□□ 0.28
MSH5-201ENST00000375703 MROH5Q6ZUA9 1318 aa16.77■□□□□ 0.27
MSH5-201ENST00000375703 DDX60Q8IY21 1712 aaKnown RBP16.77■□□□□ 0.27
MSH5-201ENST00000375703 SHANK3Q9BYB0 1731 aa16.77■□□□□ 0.27
MSH5-201ENST00000375703 CBFA2T2O43439 604 aa16.76■□□□□ 0.27
MSH5-201ENST00000375703 MBD4O95243 580 aa16.76■□□□□ 0.27
MSH5-201ENST00000375703 FGFR2P21802 821 aa16.76■□□□□ 0.27
MSH5-201ENST00000375703 HSPA2P54652 639 aa16.76■□□□□ 0.27
MSH5-201ENST00000375703 SLC4A9Q96Q91 983 aa16.76■□□□□ 0.27
MSH5-201ENST00000375703 EPB41L4AQ9HCS5 686 aaPredicted RBP16.76■□□□□ 0.27
MSH5-201ENST00000375703 KRBA2Q6ZNG9 492 aa16.76■□□□□ 0.27
MSH5-201ENST00000375703 GTPBP4Q9BZE4 634 aaKnown RBP16.76■□□□□ 0.27
MSH5-201ENST00000375703 CNNM2Q9H8M5 875 aa16.76■□□□□ 0.27
MSH5-201ENST00000375703 ARMT1Q9H993 441 aa16.76■□□□□ 0.27
MSH5-201ENST00000375703 FMNL1O95466 1100 aaPredicted RBP16.76■□□□□ 0.27
MSH5-201ENST00000375703 SLC5A1P13866 664 aa16.76■□□□□ 0.27
MSH5-201ENST00000375703 AKNAD1Q5T1N1 836 aa16.76■□□□□ 0.27
MSH5-201ENST00000375703 MFSD6Q6ZSS7 791 aa16.76■□□□□ 0.27
MSH5-201ENST00000375703 METTL16Q86W50 562 aaKnown RBP16.76■□□□□ 0.27
MSH5-201ENST00000375703 FOXP4Q8IVH2 680 aaPredicted RBP16.76■□□□□ 0.27
MSH5-201ENST00000375703 WASF1Q92558 559 aa16.76■□□□□ 0.27
MSH5-201ENST00000375703 KRT23Q9C075 422 aa16.76■□□□□ 0.27
MSH5-201ENST00000375703 CFAP100Q494V2 611 aa16.75■□□□□ 0.27
MSH5-201ENST00000375703 SYT10Q6XYQ8 523 aa16.75■□□□□ 0.27
MSH5-201ENST00000375703 DZIP3Q86Y13 1208 aaKnown RBP16.75■□□□□ 0.27
MSH5-201ENST00000375703 NOSTRINQ8IVI9 506 aa16.75■□□□□ 0.27
MSH5-201ENST00000375703 KRI1Q8N9T8 703 aaKnown RBP16.75■□□□□ 0.27
MSH5-201ENST00000375703 DPF2Q92785 391 aa16.75■□□□□ 0.27
MSH5-201ENST00000375703 SYTL4Q96C24 671 aaPredicted RBP16.75■□□□□ 0.27
MSH5-201ENST00000375703 PCDHA5Q9Y5H7 936 aa16.75■□□□□ 0.27
MSH5-201ENST00000375703 STK36Q9NRP7 1315 aa16.75■□□□□ 0.27
MSH5-201ENST00000375703 TOGARAM1Q9Y4F4 1720 aa16.75■□□□□ 0.27
MSH5-201ENST00000375703 BTBD18B2RXH4 712 aa16.75■□□□□ 0.27
MSH5-201ENST00000375703 ERVV-1B6SEH8 477 aa16.75■□□□□ 0.27
MSH5-201ENST00000375703 IFNAR1P17181 557 aa16.75■□□□□ 0.27
MSH5-201ENST00000375703 SAFBQ15424 915 aaKnown RBP eCLIP16.75■□□□□ 0.27
MSH5-201ENST00000375703 ZNF397Q8NF99 534 aaPredicted RBP16.75■□□□□ 0.27
MSH5-201ENST00000375703 DDX41Q9UJV9 622 aaKnown RBP16.75■□□□□ 0.27
MSH5-201ENST00000375703 TACC3Q9Y6A5 838 aa16.75■□□□□ 0.27
MSH5-201ENST00000375703 GSG1L2A8MUP6 293 aa16.74■□□□□ 0.27
MSH5-201ENST00000375703 SNAP23O00161 211 aa16.74■□□□□ 0.27
MSH5-201ENST00000375703 TUBB4AP04350 444 aa16.74■□□□□ 0.27
MSH5-201ENST00000375703 RRP12Q5JTH9 1297 aaKnown RBP16.74■□□□□ 0.27
MSH5-201ENST00000375703 SPECC1Q5M775 1068 aa16.74■□□□□ 0.27
MSH5-201ENST00000375703 TOMM22Q9NS69 142 aa16.74■□□□□ 0.27
MSH5-201ENST00000375703 GUCY1A2P33402 732 aa16.74■□□□□ 0.27
MSH5-201ENST00000375703 RASGRF1Q13972 1273 aa16.74■□□□□ 0.27
MSH5-201ENST00000375703 FANCLQ9NW38 375 aa16.74■□□□□ 0.27
MSH5-201ENST00000375703 MMP1P03956 469 aa16.73■□□□□ 0.27
MSH5-201ENST00000375703 KMT5BQ4FZB7 885 aa16.73■□□□□ 0.27
MSH5-201ENST00000375703 HOMER1Q86YM7 354 aa16.73■□□□□ 0.27
MSH5-201ENST00000375703 TRIM22Q8IYM9 498 aa16.73■□□□□ 0.27
MSH5-201ENST00000375703 ZNF34Q8IZ26 560 aa16.73■□□□□ 0.27
MSH5-201ENST00000375703 MPHOSPH8Q99549 860 aa16.73■□□□□ 0.27
MSH5-201ENST00000375703 ZKSCAN3Q9BRR0 538 aa16.73■□□□□ 0.27
MSH5-201ENST00000375703 HOOK1Q9UJC3 728 aaKnown RBP16.73■□□□□ 0.27
MSH5-201ENST00000375703 CCP110O43303 1012 aa16.73■□□□□ 0.27
MSH5-201ENST00000375703 PRKAB2O43741 272 aa16.73■□□□□ 0.27
MSH5-201ENST00000375703 SART3Q15020 963 aaKnown RBP16.73■□□□□ 0.27
MSH5-201ENST00000375703 ELF2Q15723 593 aa16.73■□□□□ 0.27
MSH5-201ENST00000375703 DIS3L2Q8IYB7 885 aaKnown RBP16.73■□□□□ 0.27
MSH5-201ENST00000375703 NACAP1Q9BZK3 213 aa16.73■□□□□ 0.27
MSH5-201ENST00000375703 KCNJ14Q9UNX9 436 aa16.73■□□□□ 0.27
MSH5-201ENST00000375703 MYO1BO43795 1136 aa16.72■□□□□ 0.27
MSH5-201ENST00000375703 TDO2P48775 406 aa16.72■□□□□ 0.27
MSH5-201ENST00000375703 TOB1P50616 345 aaPredicted RBP16.72■□□□□ 0.27
MSH5-201ENST00000375703 MDM2Q00987 491 aaPredicted RBP16.72■□□□□ 0.27
MSH5-201ENST00000375703 STK11IPQ8N1F8 1099 aa16.72■□□□□ 0.27
MSH5-201ENST00000375703 CCDC82Q8N4S0 544 aa16.72■□□□□ 0.27
MSH5-201ENST00000375703 L2HGDHQ9H9P8 463 aa16.72■□□□□ 0.27
MSH5-201ENST00000375703 SLC4A4Q9Y6R1 1079 aa16.72■□□□□ 0.27
MSH5-201ENST00000375703 MORC2Q9Y6X9 1032 aaPredicted RBP16.72■□□□□ 0.27
MSH5-201ENST00000375703 FOXN1O15353 648 aa16.72■□□□□ 0.27
MSH5-201ENST00000375703 TOP1P11387 765 aaKnown RBP16.72■□□□□ 0.27
MSH5-201ENST00000375703 IL6STP40189 918 aaPredicted RBP16.72■□□□□ 0.27
MSH5-201ENST00000375703 WTAPQ15007 396 aa16.72■□□□□ 0.27
MSH5-201ENST00000375703 RTN1Q16799 776 aa16.72■□□□□ 0.27
MSH5-201ENST00000375703 ELOA2Q8IYF1 753 aaPredicted RBP16.72■□□□□ 0.27
MSH5-201ENST00000375703 BTG4Q9NY30 223 aa16.72■□□□□ 0.27
MSH5-201ENST00000375703 MYO5AQ9Y4I1 1855 aaKnown RBP16.71■□□□□ 0.27
MSH5-201ENST00000375703 ERICH2A1L162 156 aa16.71■□□□□ 0.27
MSH5-201ENST00000375703 NPHP1O15259 732 aa16.71■□□□□ 0.27
MSH5-201ENST00000375703 VSTM4Q8IW00 320 aa16.71■□□□□ 0.27
MSH5-201ENST00000375703 GNAT2P19087 354 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms