RNA–Protein interactions for RNA: ENST00000374673.3

HSPG2-201, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-201ENST00000374673 FLT1P17948 1338 aa18.06■□□□□ 0.48
HSPG2-201ENST00000374673 GPAA1O43292 621 aa18.06■□□□□ 0.48
HSPG2-201ENST00000374673 TCP10Q12799 353 aa18.06■□□□□ 0.48
HSPG2-201ENST00000374673 STRBPQ96SI9 672 aaKnown RBP18.06■□□□□ 0.48
HSPG2-201ENST00000374673 SEC62Q99442 399 aaKnown RBP18.06■□□□□ 0.48
HSPG2-201ENST00000374673 OSBPL5Q9H0X9 879 aaPredicted RBP18.06■□□□□ 0.48
HSPG2-201ENST00000374673 SIPA1L1O43166 1804 aa18.05■□□□□ 0.48
HSPG2-201ENST00000374673 SSC5DA1L4H1 1573 aa18.05■□□□□ 0.48
HSPG2-201ENST00000374673 PAPPA2Q9BXP8 1791 aa18.05■□□□□ 0.48
HSPG2-201ENST00000374673 A0A0D9SFI3 127 aa18.05■□□□□ 0.48
HSPG2-201ENST00000374673 USP5P45974 858 aa18.05■□□□□ 0.48
HSPG2-201ENST00000374673 NMIQ13287 307 aaPredicted RBP18.05■□□□□ 0.48
HSPG2-201ENST00000374673 PRAMEF18Q5VWM3 479 aa18.05■□□□□ 0.48
HSPG2-201ENST00000374673 MAPKAPK5Q8IW41 473 aa18.05■□□□□ 0.48
HSPG2-201ENST00000374673 ZFPM1Q8IX07 1006 aa18.05■□□□□ 0.48
HSPG2-201ENST00000374673 FAM227BQ96M60 508 aa18.05■□□□□ 0.48
HSPG2-201ENST00000374673 DIAPH3Q9NSV4 1193 aa18.05■□□□□ 0.48
HSPG2-201ENST00000374673 BAZ2AQ9UIF9 1905 aaKnown RBP18.05■□□□□ 0.48
HSPG2-201ENST00000374673 NF2P35240 595 aa18.04■□□□□ 0.48
HSPG2-201ENST00000374673 C1QTNF8P60827 252 aa18.04■□□□□ 0.48
HSPG2-201ENST00000374673 SUPT20HL1Q3ZLR7 823 aa18.04■□□□□ 0.48
HSPG2-201ENST00000374673 MCMDC2Q4G0Z9 681 aa18.04■□□□□ 0.48
HSPG2-201ENST00000374673 NBPF12Q5TAG4 269 aaPredicted RBP18.04■□□□□ 0.48
HSPG2-201ENST00000374673 CDAN1Q8IWY9 1227 aa18.04■□□□□ 0.48
HSPG2-201ENST00000374673 MKRN1Q9UHC7 482 aaKnown RBP18.04■□□□□ 0.48
HSPG2-201ENST00000374673 PRKAB2O43741 272 aa18.03■□□□□ 0.48
HSPG2-201ENST00000374673 CELF2O95319 508 aaKnown RBP18.03■□□□□ 0.48
HSPG2-201ENST00000374673 GNAT2P19087 354 aa18.03■□□□□ 0.48
HSPG2-201ENST00000374673 CST9Q5W186 159 aa18.03■□□□□ 0.48
HSPG2-201ENST00000374673 SH3BP5LQ7L8J4 393 aa18.03■□□□□ 0.48
HSPG2-201ENST00000374673 SDR42E1Q8WUS8 393 aa18.03■□□□□ 0.48
HSPG2-201ENST00000374673 DCP1AQ9NPI6 582 aaPredicted RBP18.03■□□□□ 0.48
HSPG2-201ENST00000374673 ATP8A2Q9NTI2 1148 aa18.03■□□□□ 0.48
HSPG2-201ENST00000374673 SLC4A4Q9Y6R1 1079 aa18.03■□□□□ 0.48
HSPG2-201ENST00000374673 LAMB1P07942 1786 aa18.02■□□□□ 0.48
HSPG2-201ENST00000374673 DDTLA6NHG4 134 aaPredicted RBP18.02■□□□□ 0.48
HSPG2-201ENST00000374673 CHMLP26374 656 aa18.02■□□□□ 0.48
HSPG2-201ENST00000374673 APLP1P51693 650 aa18.02■□□□□ 0.48
HSPG2-201ENST00000374673 CWC27Q6UX04 472 aaKnown RBP18.02■□□□□ 0.48
HSPG2-201ENST00000374673 HOOK2Q96ED9 719 aa18.02■□□□□ 0.48
HSPG2-201ENST00000374673 DHX36Q9H2U1 1008 aaKnown RBP18.02■□□□□ 0.48
HSPG2-201ENST00000374673 ZNF408Q9H9D4 720 aa18.02■□□□□ 0.48
HSPG2-201ENST00000374673 RAD50Q92878 1312 aa18.01■□□□□ 0.47
HSPG2-201ENST00000374673 FKBP1BP68106 108 aa18.01■□□□□ 0.47
HSPG2-201ENST00000374673 GIMAP6Q6P9H5 292 aa18.01■□□□□ 0.47
HSPG2-201ENST00000374673 CCDC129Q6ZRS4 1044 aa18.01■□□□□ 0.47
HSPG2-201ENST00000374673 ZSCAN29Q8IWY8 852 aaPredicted RBP18.01■□□□□ 0.47
HSPG2-201ENST00000374673 CSRNP1Q96S65 589 aa18.01■□□□□ 0.47
HSPG2-201ENST00000374673 GBA2Q9HCG7 927 aaPredicted RBP18.01■□□□□ 0.47
HSPG2-201ENST00000374673 OTOFQ9HC10 1997 aa18■□□□□ 0.47
HSPG2-201ENST00000374673 CCDC171Q6TFL3 1326 aa18■□□□□ 0.47
HSPG2-201ENST00000374673 TMEM88BA6NKF7 163 aa18■□□□□ 0.47
HSPG2-201ENST00000374673 GSG1L2A8MUP6 293 aa18■□□□□ 0.47
HSPG2-201ENST00000374673 PATL2C9JE40 543 aaKnown RBP18■□□□□ 0.47
HSPG2-201ENST00000374673 MFAP1P55081 439 aaKnown RBP18■□□□□ 0.47
HSPG2-201ENST00000374673 ZNF589Q86UQ0 364 aaPredicted RBP18■□□□□ 0.47
HSPG2-201ENST00000374673 RUFY2Q8WXA3 655 aa18■□□□□ 0.47
HSPG2-201ENST00000374673 DDRGK1Q96HY6 314 aa18■□□□□ 0.47
HSPG2-201ENST00000374673 MAP3K10Q02779 954 aa17.99■□□□□ 0.47
HSPG2-201ENST00000374673 MAP3K11Q16584 847 aa17.99■□□□□ 0.47
HSPG2-201ENST00000374673 DCAF15Q66K64 600 aa17.99■□□□□ 0.47
HSPG2-201ENST00000374673 C2orf69Q8N8R5 385 aa17.99■□□□□ 0.47
HSPG2-201ENST00000374673 CREBZFQ9NS37 354 aa17.99■□□□□ 0.47
HSPG2-201ENST00000374673 MCM9Q9NXL9 1143 aa17.99■□□□□ 0.47
HSPG2-201ENST00000374673 PI4KBQ9UBF8 816 aa17.99■□□□□ 0.47
HSPG2-201ENST00000374673 SAP30BPQ9UHR5 308 aaKnown RBP17.99■□□□□ 0.47
HSPG2-201ENST00000374673 PALD1Q9ULE6 856 aa17.99■□□□□ 0.47
HSPG2-201ENST00000374673 FOXP2O15409 715 aa17.98■□□□□ 0.47
HSPG2-201ENST00000374673 PPP1R12BO60237 982 aaPredicted RBP17.98■□□□□ 0.47
HSPG2-201ENST00000374673 TBC1D12O60347 775 aa17.98■□□□□ 0.47
HSPG2-201ENST00000374673 HLA-DOAP06340 250 aa17.98■□□□□ 0.47
HSPG2-201ENST00000374673 ARMC9Q7Z3E5 817 aa17.98■□□□□ 0.47
HSPG2-201ENST00000374673 TTC6Q86TZ1 520 aa17.98■□□□□ 0.47
HSPG2-201ENST00000374673 IL25Q9H293 177 aa17.98■□□□□ 0.47
HSPG2-201ENST00000374673 EPB41L4AQ9HCS5 686 aaPredicted RBP17.98■□□□□ 0.47
HSPG2-201ENST00000374673 ARPP21Q9UBL0 812 aaPredicted RBP17.98■□□□□ 0.47
HSPG2-201ENST00000374673 CDC45O75419 566 aa17.97■□□□□ 0.47
HSPG2-201ENST00000374673 USP2O75604 605 aaPredicted RBP17.97■□□□□ 0.47
HSPG2-201ENST00000374673 POLR3DP05423 398 aaPredicted RBP17.97■□□□□ 0.47
HSPG2-201ENST00000374673 HSPA6P17066 643 aa17.97■□□□□ 0.47
HSPG2-201ENST00000374673 VPS53Q5VIR6 699 aa17.97■□□□□ 0.47
HSPG2-201ENST00000374673 METTL16Q86W50 562 aaKnown RBP17.97■□□□□ 0.47
HSPG2-201ENST00000374673 IFNL3Q8IZI9 196 aa17.97■□□□□ 0.47
HSPG2-201ENST00000374673 NACAP1Q9BZK3 213 aa17.97■□□□□ 0.47
HSPG2-201ENST00000374673 EHD4Q9H223 541 aa17.97■□□□□ 0.47
HSPG2-201ENST00000374673 HERC5Q9UII4 1024 aaKnown RBP17.97■□□□□ 0.47
HSPG2-201ENST00000374673 ANGEL1Q9UNK9 670 aaKnown RBP17.97■□□□□ 0.47
HSPG2-201ENST00000374673 TLL2Q9Y6L7 1015 aa17.97■□□□□ 0.47
HSPG2-201ENST00000374673 MYH8P13535 1937 aa17.97■□□□□ 0.47
HSPG2-201ENST00000374673 SGSM2O43147 1006 aa17.96■□□□□ 0.47
HSPG2-201ENST00000374673 APPP05067 770 aa17.96■□□□□ 0.47
HSPG2-201ENST00000374673 HSPD1P10809 573 aaKnown RBP17.96■□□□□ 0.47
HSPG2-201ENST00000374673 IREB2P48200 963 aaKnown RBP17.96■□□□□ 0.47
HSPG2-201ENST00000374673 PRKG1Q13976 671 aa17.96■□□□□ 0.47
HSPG2-201ENST00000374673 TTLL12Q14166 644 aaPredicted RBP17.96■□□□□ 0.47
HSPG2-201ENST00000374673 SBK1Q52WX2 424 aa17.96■□□□□ 0.47
HSPG2-201ENST00000374673 CTR9Q6PD62 1173 aa17.96■□□□□ 0.47
HSPG2-201ENST00000374673 MIGA2Q7L4E1 593 aa17.96■□□□□ 0.47
HSPG2-201ENST00000374673 SAPCD2Q86UD0 394 aa17.96■□□□□ 0.47
HSPG2-201ENST00000374673 FOXP4Q8IVH2 680 aaPredicted RBP17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 162.8 ms