RNA–Protein interactions for RNA: ENST00000374466.3

CSGALNACT2-201, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSGALNACT2, Length 3,730 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT2-201ENST00000374466 H7C1D1 291 aa13.36□□□□□ -0.27
CSGALNACT2-201ENST00000374466 ZNF589Q86UQ0 364 aaPredicted RBP13.36□□□□□ -0.27
CSGALNACT2-201ENST00000374466 FOXP4Q8IVH2 680 aaPredicted RBP13.36□□□□□ -0.27
CSGALNACT2-201ENST00000374466 LCORLQ8N3X6 602 aa13.36□□□□□ -0.27
CSGALNACT2-201ENST00000374466 FAM227BQ96M60 508 aa13.36□□□□□ -0.27
CSGALNACT2-201ENST00000374466 KRT32Q14532 448 aa13.36□□□□□ -0.27
CSGALNACT2-201ENST00000374466 MICALL2Q8IY33 904 aa13.36□□□□□ -0.27
CSGALNACT2-201ENST00000374466 TBC1D32Q96NH3 1257 aa13.36□□□□□ -0.27
CSGALNACT2-201ENST00000374466 MAP3K14Q99558 947 aa13.36□□□□□ -0.27
CSGALNACT2-201ENST00000374466 MAF1Q9H063 256 aa13.36□□□□□ -0.27
CSGALNACT2-201ENST00000374466 KIF4BQ2VIQ3 1234 aa13.36□□□□□ -0.27
CSGALNACT2-201ENST00000374466 CCDC178Q5BJE1 867 aa13.36□□□□□ -0.27
CSGALNACT2-201ENST00000374466 LDHDQ86WU2 507 aa13.36□□□□□ -0.27
CSGALNACT2-201ENST00000374466 IFNL3Q8IZI9 196 aa13.36□□□□□ -0.27
CSGALNACT2-201ENST00000374466 OGFOD1Q8N543 542 aa13.36□□□□□ -0.27
CSGALNACT2-201ENST00000374466 RAI14Q9P0K7 980 aa13.36□□□□□ -0.27
CSGALNACT2-201ENST00000374466 PASKQ96RG2 1323 aa13.35□□□□□ -0.27
CSGALNACT2-201ENST00000374466 G3V3G9 751 aa13.35□□□□□ -0.27
CSGALNACT2-201ENST00000374466 DCAF8Q5TAQ9 597 aa13.35□□□□□ -0.27
CSGALNACT2-201ENST00000374466 TEX2Q8IWB9 1127 aa13.35□□□□□ -0.27
CSGALNACT2-201ENST00000374466 NBPF3Q9H094 633 aa13.35□□□□□ -0.27
CSGALNACT2-201ENST00000374466 HIRAP54198 1017 aaPredicted RBP13.35□□□□□ -0.27
CSGALNACT2-201ENST00000374466 DLGAP5Q15398 846 aa13.35□□□□□ -0.27
CSGALNACT2-201ENST00000374466 MBD4O95243 580 aa13.34□□□□□ -0.27
CSGALNACT2-201ENST00000374466 TNNI2P48788 182 aa13.34□□□□□ -0.27
CSGALNACT2-201ENST00000374466 CTR9Q6PD62 1173 aa13.34□□□□□ -0.27
CSGALNACT2-201ENST00000374466 NOL10Q9BSC4 688 aaKnown RBP13.34□□□□□ -0.27
CSGALNACT2-201ENST00000374466 NACAP1Q9BZK3 213 aa13.34□□□□□ -0.27
CSGALNACT2-201ENST00000374466 TRIM6-TRIM34B2RNG4 842 aa13.34□□□□□ -0.27
CSGALNACT2-201ENST00000374466 RAD17O75943 681 aa13.34□□□□□ -0.27
CSGALNACT2-201ENST00000374466 HMGB1P09429 215 aaKnown RBP13.34□□□□□ -0.27
CSGALNACT2-201ENST00000374466 RBM46Q8TBY0 533 aaKnown RBP13.34□□□□□ -0.27
CSGALNACT2-201ENST00000374466 SH3RF3Q8TEJ3 882 aaPredicted RBP13.34□□□□□ -0.27
CSGALNACT2-201ENST00000374466 PRMT6Q96LA8 375 aaPredicted RBP13.34□□□□□ -0.27
CSGALNACT2-201ENST00000374466 IDH1O75874 414 aaKnown RBP13.34□□□□□ -0.27
CSGALNACT2-201ENST00000374466 AIDAQ96BJ3 306 aa13.34□□□□□ -0.27
CSGALNACT2-201ENST00000374466 CNNM2Q9H8M5 875 aa13.34□□□□□ -0.27
CSGALNACT2-201ENST00000374466 RBBP6Q7Z6E9 1792 aaKnown RBP13.33□□□□□ -0.28
CSGALNACT2-201ENST00000374466 LMOD1P29536 600 aaPredicted RBP13.33□□□□□ -0.28
CSGALNACT2-201ENST00000374466 EPHX2P34913 555 aa13.33□□□□□ -0.28
CSGALNACT2-201ENST00000374466 FSTL1Q12841 308 aa13.33□□□□□ -0.28
CSGALNACT2-201ENST00000374466 CHAF1AQ13111 956 aaPredicted RBP13.33□□□□□ -0.28
CSGALNACT2-201ENST00000374466 KIF2CQ99661 725 aa13.33□□□□□ -0.28
CSGALNACT2-201ENST00000374466 SH3BP5LQ7L8J4 393 aa13.33□□□□□ -0.28
CSGALNACT2-201ENST00000374466 RILPL2Q969X0 211 aa13.33□□□□□ -0.28
CSGALNACT2-201ENST00000374466 ZNF236Q9UL36 1845 aa13.32□□□□□ -0.28
CSGALNACT2-201ENST00000374466 MYO1BO43795 1136 aa13.32□□□□□ -0.28
CSGALNACT2-201ENST00000374466 RCSD1Q6JBY9 416 aa13.32□□□□□ -0.28
CSGALNACT2-201ENST00000374466 TTC6Q86TZ1 520 aa13.32□□□□□ -0.28
CSGALNACT2-201ENST00000374466 FAM177A1Q8N128 213 aaPredicted RBP13.32□□□□□ -0.28
CSGALNACT2-201ENST00000374466 CCDC17Q96LX7 622 aa13.32□□□□□ -0.28
CSGALNACT2-201ENST00000374466 RLFQ13129 1914 aa13.32□□□□□ -0.28
CSGALNACT2-201ENST00000374466 VEGFAP15692 232 aaPredicted RBP13.32□□□□□ -0.28
CSGALNACT2-201ENST00000374466 RGS3P49796 1198 aa13.32□□□□□ -0.28
CSGALNACT2-201ENST00000374466 EXOSC10Q01780 885 aaKnown RBP13.32□□□□□ -0.28
CSGALNACT2-201ENST00000374466 RNF41Q9H4P4 317 aaPredicted RBP13.32□□□□□ -0.28
CSGALNACT2-201ENST00000374466 ZSWIM6Q9HCJ5 1215 aa13.32□□□□□ -0.28
CSGALNACT2-201ENST00000374466 MKL1Q969V6 931 aa13.31□□□□□ -0.28
CSGALNACT2-201ENST00000374466 ZNF287Q9HBT7 754 aa13.31□□□□□ -0.28
CSGALNACT2-201ENST00000374466 USP40Q9NVE5 1235 aa13.31□□□□□ -0.28
CSGALNACT2-201ENST00000374466 FRAT2O75474 233 aaPredicted RBP13.31□□□□□ -0.28
CSGALNACT2-201ENST00000374466 FGAP02671 866 aa13.31□□□□□ -0.28
CSGALNACT2-201ENST00000374466 DDX4Q9NQI0 724 aaKnown RBP13.31□□□□□ -0.28
CSGALNACT2-201ENST00000374466 PI4KBQ9UBF8 816 aa13.31□□□□□ -0.28
CSGALNACT2-201ENST00000374466 PALD1Q9ULE6 856 aa13.31□□□□□ -0.28
CSGALNACT2-201ENST00000374466 PHF20L1A8MW92 1017 aa13.31□□□□□ -0.28
CSGALNACT2-201ENST00000374466 SLC27A2O14975 620 aa13.31□□□□□ -0.28
CSGALNACT2-201ENST00000374466 PTH1RQ03431 593 aa13.31□□□□□ -0.28
CSGALNACT2-201ENST00000374466 DIXDC1Q155Q3 683 aa13.31□□□□□ -0.28
CSGALNACT2-201ENST00000374466 RNF20Q5VTR2 975 aa13.31□□□□□ -0.28
CSGALNACT2-201ENST00000374466 MYH4Q9Y623 1939 aa13.31□□□□□ -0.28
CSGALNACT2-201ENST00000374466 TEX11Q8IYF3 940 aa13.3□□□□□ -0.28
CSGALNACT2-201ENST00000374466 SNX21Q969T3 373 aa13.3□□□□□ -0.28
CSGALNACT2-201ENST00000374466 MXD3Q9BW11 206 aa13.3□□□□□ -0.28
CSGALNACT2-201ENST00000374466 ABCF2Q9UG63 623 aa13.3□□□□□ -0.28
CSGALNACT2-201ENST00000374466 MB21D2Q8IYB1 491 aaPredicted RBP13.3□□□□□ -0.28
CSGALNACT2-201ENST00000374466 TRPM4Q8TD43 1214 aa13.3□□□□□ -0.28
CSGALNACT2-201ENST00000374466 SLC4A4Q9Y6R1 1079 aa13.3□□□□□ -0.28
CSGALNACT2-201ENST00000374466 PLA2G6O60733 806 aa13.3□□□□□ -0.28
CSGALNACT2-201ENST00000374466 DDNO94850 711 aaPredicted RBP13.3□□□□□ -0.28
CSGALNACT2-201ENST00000374466 DYNLL1P63167 89 aaKnown RBP13.3□□□□□ -0.28
CSGALNACT2-201ENST00000374466 TTC14Q96N46 770 aa13.3□□□□□ -0.28
CSGALNACT2-201ENST00000374466 ARMT1Q9H993 441 aa13.3□□□□□ -0.28
CSGALNACT2-201ENST00000374466 ZNF219Q9P2Y4 722 aaPredicted RBP13.3□□□□□ -0.28
CSGALNACT2-201ENST00000374466 RBM8AQ9Y5S9 174 aaKnown RBP13.3□□□□□ -0.28
CSGALNACT2-201ENST00000374466 NDUFB9Q9Y6M9 179 aa13.3□□□□□ -0.28
CSGALNACT2-201ENST00000374466 CREB3L3Q68CJ9 461 aa13.29□□□□□ -0.28
CSGALNACT2-201ENST00000374466 CWC27Q6UX04 472 aaKnown RBP13.29□□□□□ -0.28
CSGALNACT2-201ENST00000374466 KRT23Q9C075 422 aa13.29□□□□□ -0.28
CSGALNACT2-201ENST00000374466 SMARCA1P28370 1054 aa13.29□□□□□ -0.28
CSGALNACT2-201ENST00000374466 PPARAQ07869 468 aa13.29□□□□□ -0.28
CSGALNACT2-201ENST00000374466 KIAA0825Q8IV33 1275 aa13.29□□□□□ -0.28
CSGALNACT2-201ENST00000374466 SEC62Q99442 399 aaKnown RBP13.29□□□□□ -0.28
CSGALNACT2-201ENST00000374466 LDLRAD1Q5T700 205 aa13.29□□□□□ -0.28
CSGALNACT2-201ENST00000374466 AATFQ9NY61 560 aaKnown RBP eCLIP13.29□□□□□ -0.28
CSGALNACT2-201ENST00000374466 TMOD2Q9NZR1 351 aa13.29□□□□□ -0.28
CSGALNACT2-201ENST00000374466 IQSEC3Q9UPP2 1182 aaPredicted RBP13.29□□□□□ -0.28
CSGALNACT2-201ENST00000374466 ZBTB12Q9Y330 459 aaPredicted RBP13.29□□□□□ -0.28
CSGALNACT2-201ENST00000374466 EPS15P42566 896 aa13.28□□□□□ -0.28
CSGALNACT2-201ENST00000374466 IMMTQ16891 758 aaKnown RBP13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms