RNA–Protein interactions for RNA: ENST00000371937.8

ATPAF1-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-202ENST00000371937 INCENPQ9NQS7 918 aa30.98■■■□□ 2.55
ATPAF1-202ENST00000371937 KCNQ5Q9NR82 932 aa30.98■■■□□ 2.55
ATPAF1-202ENST00000371937 MCM9Q9NXL9 1143 aa30.98■■■□□ 2.55
ATPAF1-202ENST00000371937 DAGLAQ9Y4D2 1042 aa30.98■■■□□ 2.55
ATPAF1-202ENST00000371937 F8W031 263 aaPredicted RBP30.97■■■□□ 2.55
ATPAF1-202ENST00000371937 KDM4AO75164 1064 aa30.97■■■□□ 2.55
ATPAF1-202ENST00000371937 PTGER2P43116 358 aa30.97■■■□□ 2.55
ATPAF1-202ENST00000371937 AMOTL1Q8IY63 956 aa30.97■■■□□ 2.55
ATPAF1-202ENST00000371937 MTA3Q9BTC8 594 aa30.97■■■□□ 2.55
ATPAF1-202ENST00000371937 MXD3Q9BW11 206 aa30.97■■■□□ 2.55
ATPAF1-202ENST00000371937 ZSWIM5Q9P217 1185 aa30.97■■■□□ 2.55
ATPAF1-202ENST00000371937 ANGEL1Q9UNK9 670 aaKnown RBP30.97■■■□□ 2.55
ATPAF1-202ENST00000371937 HHIPL2Q6UWX4 724 aa30.96■■■□□ 2.55
ATPAF1-202ENST00000371937 TGFBRAP1Q8WUH2 860 aa30.96■■■□□ 2.55
ATPAF1-202ENST00000371937 TACC3Q9Y6A5 838 aa30.96■■■□□ 2.55
ATPAF1-202ENST00000371937 RRP12Q5JTH9 1297 aaKnown RBP30.96■■■□□ 2.55
ATPAF1-202ENST00000371937 TEX11Q8IYF3 940 aa30.96■■■□□ 2.55
ATPAF1-202ENST00000371937 ESR2Q92731 530 aa30.96■■■□□ 2.55
ATPAF1-202ENST00000371937 TNPO1Q92973 898 aaKnown RBP30.96■■■□□ 2.55
ATPAF1-202ENST00000371937 MRIQ9BWK5 157 aa30.96■■■□□ 2.55
ATPAF1-202ENST00000371937 CYP2D7A0A087X1C5 515 aa30.95■■■□□ 2.55
ATPAF1-202ENST00000371937 FGRP09769 529 aa30.95■■■□□ 2.55
ATPAF1-202ENST00000371937 NBR1Q14596 966 aa30.95■■■□□ 2.55
ATPAF1-202ENST00000371937 TEKT1Q969V4 418 aa30.95■■■□□ 2.55
ATPAF1-202ENST00000371937 PDIA3P30101 505 aaKnown RBP30.94■■■□□ 2.54
ATPAF1-202ENST00000371937 RHBDL3P58872 404 aa30.94■■■□□ 2.54
ATPAF1-202ENST00000371937 SART3Q15020 963 aaKnown RBP30.94■■■□□ 2.54
ATPAF1-202ENST00000371937 KLHL34Q8N239 644 aa30.94■■■□□ 2.54
ATPAF1-202ENST00000371937 LARGE2Q8N3Y3 721 aa30.94■■■□□ 2.54
ATPAF1-202ENST00000371937 SH2B2O14492 632 aaPredicted RBP30.94■■■□□ 2.54
ATPAF1-202ENST00000371937 GPHNQ9NQX3 736 aaPredicted RBP30.94■■■□□ 2.54
ATPAF1-202ENST00000371937 SCN9AQ15858 1988 aa30.93■■■□□ 2.54
ATPAF1-202ENST00000371937 GJB2P29033 226 aa30.93■■■□□ 2.54
ATPAF1-202ENST00000371937 HDLBPQ00341 1268 aaKnown RBP30.93■■■□□ 2.54
ATPAF1-202ENST00000371937 STK11IPQ8N1F8 1099 aa30.93■■■□□ 2.54
ATPAF1-202ENST00000371937 ANP32EQ9BTT0 268 aa30.93■■■□□ 2.54
ATPAF1-202ENST00000371937 NAP1L2Q9ULW6 460 aaPredicted RBP30.93■■■□□ 2.54
ATPAF1-202ENST00000371937 PDIA4P13667 645 aaKnown RBP30.92■■■□□ 2.54
ATPAF1-202ENST00000371937 SCRN1Q12765 414 aa30.92■■■□□ 2.54
ATPAF1-202ENST00000371937 PKP1Q13835 747 aa30.92■■■□□ 2.54
ATPAF1-202ENST00000371937 C12orf60Q5U649 245 aa30.92■■■□□ 2.54
ATPAF1-202ENST00000371937 NKX2-3Q8TAU0 364 aa30.92■■■□□ 2.54
ATPAF1-202ENST00000371937 IGDCC4Q8TDY8 1250 aa30.92■■■□□ 2.54
ATPAF1-202ENST00000371937 LLPHQ9BRT6 129 aaKnown RBP30.92■■■□□ 2.54
ATPAF1-202ENST00000371937 ZNF277Q9NRM2 450 aaPredicted RBP30.92■■■□□ 2.54
ATPAF1-202ENST00000371937 LAMB1P07942 1786 aa30.92■■■□□ 2.54
ATPAF1-202ENST00000371937 USP17L8P0C7I0 530 aa30.91■■■□□ 2.54
ATPAF1-202ENST00000371937 LIFRP42702 1097 aa30.91■■■□□ 2.54
ATPAF1-202ENST00000371937 NT5C2P49902 561 aa30.91■■■□□ 2.54
ATPAF1-202ENST00000371937 PDE4BQ07343 736 aa30.91■■■□□ 2.54
ATPAF1-202ENST00000371937 TMEM67Q5HYA8 995 aa30.91■■■□□ 2.54
ATPAF1-202ENST00000371937 GBP4Q96PP9 640 aa30.91■■■□□ 2.54
ATPAF1-202ENST00000371937 BRCA1P38398 1863 aaKnown RBP30.91■■■□□ 2.54
ATPAF1-202ENST00000371937 KLF18A0A0U1RQI7 1052 aa30.91■■■□□ 2.54
ATPAF1-202ENST00000371937 IFIT3O14879 490 aaKnown RBP30.91■■■□□ 2.54
ATPAF1-202ENST00000371937 SCNN1DP51172 638 aa30.91■■■□□ 2.54
ATPAF1-202ENST00000371937 MAPKAPK5Q8IW41 473 aa30.91■■■□□ 2.54
ATPAF1-202ENST00000371937 ERICH2A1L162 156 aa30.9■■■□□ 2.54
ATPAF1-202ENST00000371937 YDJCA8MPS7 323 aa30.9■■■□□ 2.54
ATPAF1-202ENST00000371937 ORC4O43929 436 aa30.9■■■□□ 2.54
ATPAF1-202ENST00000371937 KIAA0825Q8IV33 1275 aa30.9■■■□□ 2.54
ATPAF1-202ENST00000371937 SGMS1Q86VZ5 419 aa30.89■■■□□ 2.54
ATPAF1-202ENST00000371937 BRPF3Q9ULD4 1205 aa30.89■■■□□ 2.54
ATPAF1-202ENST00000371937 DDX52Q9Y2R4 599 aaKnown RBP eCLIP30.89■■■□□ 2.54
ATPAF1-202ENST00000371937 WDR33Q9C0J8 1336 aaKnown RBP30.89■■■□□ 2.54
ATPAF1-202ENST00000371937 SMIM22K7EJ46 135 aa30.89■■■□□ 2.53
ATPAF1-202ENST00000371937 DHX16O60231 1041 aaKnown RBP30.89■■■□□ 2.53
ATPAF1-202ENST00000371937 BRD1O95696 1058 aa30.89■■■□□ 2.53
ATPAF1-202ENST00000371937 CYP2D6P10635 497 aa30.89■■■□□ 2.53
ATPAF1-202ENST00000371937 CRKP46108 304 aa30.89■■■□□ 2.53
ATPAF1-202ENST00000371937 TMTC2Q8N394 836 aa30.89■■■□□ 2.53
ATPAF1-202ENST00000371937 UBAC1Q9BSL1 405 aa30.89■■■□□ 2.53
ATPAF1-202ENST00000371937 ZDHHC9Q9Y397 364 aa30.89■■■□□ 2.53
ATPAF1-202ENST00000371937 NAV1Q8NEY1 1877 aa30.88■■■□□ 2.53
ATPAF1-202ENST00000371937 FLT1P17948 1338 aa30.88■■■□□ 2.53
ATPAF1-202ENST00000371937 POLR3DP05423 398 aaPredicted RBP30.88■■■□□ 2.53
ATPAF1-202ENST00000371937 ZDHHC15Q96MV8 337 aa30.88■■■□□ 2.53
ATPAF1-202ENST00000371937 LY9Q9HBG7 655 aa30.88■■■□□ 2.53
ATPAF1-202ENST00000371937 MYO3BQ8WXR4 1341 aa30.88■■■□□ 2.53
ATPAF1-202ENST00000371937 ZNF646O15015 1829 aaPredicted RBP30.88■■■□□ 2.53
ATPAF1-202ENST00000371937 ROBO3Q96MS0 1386 aa30.88■■■□□ 2.53
ATPAF1-202ENST00000371937 GOLGA8BA8MQT2 603 aa30.87■■■□□ 2.53
ATPAF1-202ENST00000371937 PDCP20941 246 aa30.87■■■□□ 2.53
ATPAF1-202ENST00000371937 IARSP41252 1262 aaKnown RBP30.87■■■□□ 2.53
ATPAF1-202ENST00000371937 CCT2P78371 535 aaKnown RBP30.87■■■□□ 2.53
ATPAF1-202ENST00000371937 CLEC17AQ6ZS10 378 aa30.87■■■□□ 2.53
ATPAF1-202ENST00000371937 TAOK3Q9H2K8 898 aa30.87■■■□□ 2.53
ATPAF1-202ENST00000371937 RANBP6O60518 1105 aaKnown RBP30.87■■■□□ 2.53
ATPAF1-202ENST00000371937 SYT1P21579 422 aa30.87■■■□□ 2.53
ATPAF1-202ENST00000371937 NFXL1Q6ZNB6 911 aa30.87■■■□□ 2.53
ATPAF1-202ENST00000371937 NIM1KQ8IY84 436 aa30.87■■■□□ 2.53
ATPAF1-202ENST00000371937 SPON1Q9HCB6 807 aa30.87■■■□□ 2.53
ATPAF1-202ENST00000371937 USP40Q9NVE5 1235 aa30.87■■■□□ 2.53
ATPAF1-202ENST00000371937 SERPINA10Q9UK55 444 aa30.87■■■□□ 2.53
ATPAF1-202ENST00000371937 CDK5RAP2Q96SN8 1893 aa30.87■■■□□ 2.53
ATPAF1-202ENST00000371937 APOBEC3HQ6NTF7 200 aaKnown RBP30.86■■■□□ 2.53
ATPAF1-202ENST00000371937 STX6O43752 255 aa30.85■■■□□ 2.53
ATPAF1-202ENST00000371937 WTAPQ15007 396 aa30.85■■■□□ 2.53
ATPAF1-202ENST00000371937 IQCA1Q86XH1 822 aa30.85■■■□□ 2.53
ATPAF1-202ENST00000371937 ZNRF3Q9ULT6 936 aa30.85■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms