RNA–Protein interactions for RNA: ENST00000370022.9

PRPF38B-202, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 1,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-202ENST00000370022 RUFY2Q8WXA3 655 aa18.65■□□□□ 0.58
PRPF38B-202ENST00000370022 DDRGK1Q96HY6 314 aa18.65■□□□□ 0.58
PRPF38B-202ENST00000370022 FAM227BQ96M60 508 aa18.65■□□□□ 0.58
PRPF38B-202ENST00000370022 TMEM39BQ9GZU3 492 aa18.65■□□□□ 0.58
PRPF38B-202ENST00000370022 DDX4Q9NQI0 724 aaKnown RBP18.65■□□□□ 0.58
PRPF38B-202ENST00000370022 ATP8A2Q9NTI2 1148 aa18.65■□□□□ 0.58
PRPF38B-202ENST00000370022 SCAF8Q9UPN6 1271 aaKnown RBP18.65■□□□□ 0.58
PRPF38B-202ENST00000370022 ATRNL1Q5VV63 1379 aa18.65■□□□□ 0.58
PRPF38B-202ENST00000370022 A0A0D9SFI3 127 aa18.64■□□□□ 0.58
PRPF38B-202ENST00000370022 TRAF5O00463 557 aa18.64■□□□□ 0.58
PRPF38B-202ENST00000370022 CHMLP26374 656 aa18.64■□□□□ 0.58
PRPF38B-202ENST00000370022 CWC27Q6UX04 472 aaKnown RBP18.64■□□□□ 0.58
PRPF38B-202ENST00000370022 MAPKAPK5Q8IW41 473 aa18.64■□□□□ 0.58
PRPF38B-202ENST00000370022 TEPSINQ96N21 525 aa18.64■□□□□ 0.58
PRPF38B-202ENST00000370022 SEC62Q99442 399 aaKnown RBP18.64■□□□□ 0.58
PRPF38B-202ENST00000370022 DHX36Q9H2U1 1008 aaKnown RBP18.64■□□□□ 0.58
PRPF38B-202ENST00000370022 SLC4A4Q9Y6R1 1079 aa18.64■□□□□ 0.58
PRPF38B-202ENST00000370022 RAD50Q92878 1312 aa18.64■□□□□ 0.57
PRPF38B-202ENST00000370022 GIMAP6Q6P9H5 292 aa18.64■□□□□ 0.57
PRPF38B-202ENST00000370022 POLR2AP24928 1970 aaKnown RBP18.63■□□□□ 0.57
PRPF38B-202ENST00000370022 CASC1Q6TDU7 716 aa18.63■□□□□ 0.57
PRPF38B-202ENST00000370022 ZSCAN29Q8IWY8 852 aaPredicted RBP18.63■□□□□ 0.57
PRPF38B-202ENST00000370022 SDR42E1Q8WUS8 393 aa18.63■□□□□ 0.57
PRPF38B-202ENST00000370022 MKRN1Q9UHC7 482 aaKnown RBP18.63■□□□□ 0.57
PRPF38B-202ENST00000370022 FOCADQ5VW36 1801 aa18.62■□□□□ 0.57
PRPF38B-202ENST00000370022 ZFPM1Q8IX07 1006 aa18.62■□□□□ 0.57
PRPF38B-202ENST00000370022 NACAP1Q9BZK3 213 aa18.62■□□□□ 0.57
PRPF38B-202ENST00000370022 DCP1AQ9NPI6 582 aaPredicted RBP18.62■□□□□ 0.57
PRPF38B-202ENST00000370022 CCDC171Q6TFL3 1326 aa18.62■□□□□ 0.57
PRPF38B-202ENST00000370022 PATL2C9JE40 543 aaKnown RBP18.61■□□□□ 0.57
PRPF38B-202ENST00000370022 PRKAB2O43741 272 aa18.61■□□□□ 0.57
PRPF38B-202ENST00000370022 CDC45O75419 566 aa18.61■□□□□ 0.57
PRPF38B-202ENST00000370022 FKBP1BP68106 108 aa18.61■□□□□ 0.57
PRPF38B-202ENST00000370022 NBPF12Q5TAG4 269 aaPredicted RBP18.61■□□□□ 0.57
PRPF38B-202ENST00000370022 PRAMEF18Q5VWM3 479 aa18.61■□□□□ 0.57
PRPF38B-202ENST00000370022 CSRNP1Q96S65 589 aa18.61■□□□□ 0.57
PRPF38B-202ENST00000370022 DDTLA6NHG4 134 aaPredicted RBP18.6■□□□□ 0.57
PRPF38B-202ENST00000370022 GSG1L2A8MUP6 293 aa18.6■□□□□ 0.57
PRPF38B-202ENST00000370022 CELF2O95319 508 aaKnown RBP18.6■□□□□ 0.57
PRPF38B-202ENST00000370022 HLA-DOAP06340 250 aa18.6■□□□□ 0.57
PRPF38B-202ENST00000370022 DCAF15Q66K64 600 aa18.6■□□□□ 0.57
PRPF38B-202ENST00000370022 DLK2Q6UY11 383 aa18.6■□□□□ 0.57
PRPF38B-202ENST00000370022 SH3BP5LQ7L8J4 393 aa18.6■□□□□ 0.57
PRPF38B-202ENST00000370022 TTC6Q86TZ1 520 aa18.6■□□□□ 0.57
PRPF38B-202ENST00000370022 AMOTL1Q8IY63 956 aa18.6■□□□□ 0.57
PRPF38B-202ENST00000370022 MCM9Q9NXL9 1143 aa18.6■□□□□ 0.57
PRPF38B-202ENST00000370022 PI4KBQ9UBF8 816 aa18.6■□□□□ 0.57
PRPF38B-202ENST00000370022 TAOK2Q9UL54 1235 aa18.6■□□□□ 0.57
PRPF38B-202ENST00000370022 CDK5RAP2Q96SN8 1893 aa18.6■□□□□ 0.57
PRPF38B-202ENST00000370022 PPP1R12BO60237 982 aaPredicted RBP18.59■□□□□ 0.57
PRPF38B-202ENST00000370022 APPP05067 770 aa18.59■□□□□ 0.57
PRPF38B-202ENST00000370022 CCDC129Q6ZRS4 1044 aa18.59■□□□□ 0.57
PRPF38B-202ENST00000370022 ZNF408Q9H9D4 720 aa18.59■□□□□ 0.57
PRPF38B-202ENST00000370022 ARPP21Q9UBL0 812 aaPredicted RBP18.59■□□□□ 0.57
PRPF38B-202ENST00000370022 FMR1Q06787 632 aaKnown RBP eCLIP18.59■□□□□ 0.57
PRPF38B-202ENST00000370022 ZNF589Q86UQ0 364 aaPredicted RBP18.59■□□□□ 0.57
PRPF38B-202ENST00000370022 CDAN1Q8IWY9 1227 aa18.59■□□□□ 0.57
PRPF38B-202ENST00000370022 IFNL3Q8IZI9 196 aa18.59■□□□□ 0.57
PRPF38B-202ENST00000370022 PALD1Q9ULE6 856 aa18.59■□□□□ 0.57
PRPF38B-202ENST00000370022 SSC5DA1L4H1 1573 aa18.58■□□□□ 0.56
PRPF38B-202ENST00000370022 TMEM88BA6NKF7 163 aa18.58■□□□□ 0.56
PRPF38B-202ENST00000370022 SGSM2O43147 1006 aa18.58■□□□□ 0.56
PRPF38B-202ENST00000370022 TBC1D12O60347 775 aa18.58■□□□□ 0.56
PRPF38B-202ENST00000370022 POLR3DP05423 398 aaPredicted RBP18.58■□□□□ 0.56
PRPF38B-202ENST00000370022 APLP1P51693 650 aa18.58■□□□□ 0.56
PRPF38B-202ENST00000370022 CST9Q5W186 159 aa18.58■□□□□ 0.56
PRPF38B-202ENST00000370022 FOXP4Q8IVH2 680 aaPredicted RBP18.58■□□□□ 0.56
PRPF38B-202ENST00000370022 C2orf69Q8N8R5 385 aa18.58■□□□□ 0.56
PRPF38B-202ENST00000370022 EHD4Q9H223 541 aa18.58■□□□□ 0.56
PRPF38B-202ENST00000370022 GBA2Q9HCG7 927 aaPredicted RBP18.58■□□□□ 0.56
PRPF38B-202ENST00000370022 SAP30BPQ9UHR5 308 aaKnown RBP18.58■□□□□ 0.56
PRPF38B-202ENST00000370022 HERC5Q9UII4 1024 aaKnown RBP18.58■□□□□ 0.56
PRPF38B-202ENST00000370022 CEP350Q5VT06 3117 aa18.58■□□□□ 0.56
PRPF38B-202ENST00000370022 DDX60LQ5H9U9 1706 aaKnown RBP18.57■□□□□ 0.56
PRPF38B-202ENST00000370022 ZMYM6O95789 1325 aa18.57■□□□□ 0.56
PRPF38B-202ENST00000370022 HSPD1P10809 573 aaKnown RBP18.57■□□□□ 0.56
PRPF38B-202ENST00000370022 TDO2P48775 406 aa18.57■□□□□ 0.56
PRPF38B-202ENST00000370022 MAP3K10Q02779 954 aa18.57■□□□□ 0.56
PRPF38B-202ENST00000370022 MAP3K11Q16584 847 aa18.57■□□□□ 0.56
PRPF38B-202ENST00000370022 SBK1Q52WX2 424 aa18.57■□□□□ 0.56
PRPF38B-202ENST00000370022 ARMC9Q7Z3E5 817 aa18.57■□□□□ 0.56
PRPF38B-202ENST00000370022 NAPBQ9H115 298 aa18.57■□□□□ 0.56
PRPF38B-202ENST00000370022 NAV1Q8NEY1 1877 aa18.57■□□□□ 0.56
PRPF38B-202ENST00000370022 TRPM7Q96QT4 1865 aa18.57■□□□□ 0.56
PRPF38B-202ENST00000370022 UNCXA6NJT0 531 aa18.56■□□□□ 0.56
PRPF38B-202ENST00000370022 ALX1Q15699 326 aa18.56■□□□□ 0.56
PRPF38B-202ENST00000370022 METTL16Q86W50 562 aaKnown RBP18.56■□□□□ 0.56
PRPF38B-202ENST00000370022 ESYT1Q9BSJ8 1104 aa18.56■□□□□ 0.56
PRPF38B-202ENST00000370022 DSCC1Q9BVC3 393 aa18.56■□□□□ 0.56
PRPF38B-202ENST00000370022 ZNF341Q9BYN7 854 aa18.56■□□□□ 0.56
PRPF38B-202ENST00000370022 EPB41L4AQ9HCS5 686 aaPredicted RBP18.56■□□□□ 0.56
PRPF38B-202ENST00000370022 PAPPA2Q9BXP8 1791 aa18.56■□□□□ 0.56
PRPF38B-202ENST00000370022 USP17L12C9JPN9 530 aa18.55■□□□□ 0.56
PRPF38B-202ENST00000370022 USP17L21D6R901 530 aa18.55■□□□□ 0.56
PRPF38B-202ENST00000370022 IREB2P48200 963 aaKnown RBP18.55■□□□□ 0.56
PRPF38B-202ENST00000370022 TTLL12Q14166 644 aaPredicted RBP18.55■□□□□ 0.56
PRPF38B-202ENST00000370022 VPS53Q5VIR6 699 aa18.55■□□□□ 0.56
PRPF38B-202ENST00000370022 CTR9Q6PD62 1173 aa18.55■□□□□ 0.56
PRPF38B-202ENST00000370022 TRIM34Q9BYJ4 488 aa18.55■□□□□ 0.56
PRPF38B-202ENST00000370022 CREBZFQ9NS37 354 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms