RNA–Protein interactions for RNA: ENST00000368207.7

PTPRK-203, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5 BASIC

Gene PTPRK, Length 4,758 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-203ENST00000368207 SSH2Q76I76 1423 aa13.96□□□□□ -0.17
PTPRK-203ENST00000368207 LEKR1Q6ZMV7 388 aa13.96□□□□□ -0.18
PTPRK-203ENST00000368207 CRACR2AQ9BSW2 395 aa13.96□□□□□ -0.18
PTPRK-203ENST00000368207 DNAI1Q9UI46 699 aa13.96□□□□□ -0.18
PTPRK-203ENST00000368207 E9PCH4 1651 aa13.96□□□□□ -0.18
PTPRK-203ENST00000368207 MADDQ8WXG6 1647 aa13.96□□□□□ -0.18
PTPRK-203ENST00000368207 POLR2DO15514 142 aaKnown RBP13.95□□□□□ -0.18
PTPRK-203ENST00000368207 MAP4K1Q92918 833 aa13.95□□□□□ -0.18
PTPRK-203ENST00000368207 BICD1Q96G01 975 aa13.95□□□□□ -0.18
PTPRK-203ENST00000368207 CROCC2H7BZ55 1655 aa13.95□□□□□ -0.18
PTPRK-203ENST00000368207 SASH1O94885 1247 aa13.95□□□□□ -0.18
PTPRK-203ENST00000368207 MRPL12P52815 198 aaKnown RBP13.95□□□□□ -0.18
PTPRK-203ENST00000368207 NLRP10Q86W26 655 aa13.95□□□□□ -0.18
PTPRK-203ENST00000368207 TAX1BP1Q86VP1 789 aa13.95□□□□□ -0.18
PTPRK-203ENST00000368207 ZNF654Q8IZM8 581 aa13.95□□□□□ -0.18
PTPRK-203ENST00000368207 UIMC1Q96RL1 719 aa13.95□□□□□ -0.18
PTPRK-203ENST00000368207 TMEM63CQ9P1W3 806 aa13.95□□□□□ -0.18
PTPRK-203ENST00000368207 ZBTB21Q9ULJ3 1066 aa13.95□□□□□ -0.18
PTPRK-203ENST00000368207 ABCA9Q8IUA7 1624 aa13.95□□□□□ -0.18
PTPRK-203ENST00000368207 ECM2O94769 699 aaPredicted RBP13.95□□□□□ -0.18
PTPRK-203ENST00000368207 RNF216Q9NWF9 866 aaPredicted RBP13.95□□□□□ -0.18
PTPRK-203ENST00000368207 PKD2L1Q9P0L9 805 aa13.95□□□□□ -0.18
PTPRK-203ENST00000368207 MAPK8IP1Q9UQF2 711 aa13.95□□□□□ -0.18
PTPRK-203ENST00000368207 CLEC11AQ9Y240 323 aa13.95□□□□□ -0.18
PTPRK-203ENST00000368207 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.95□□□□□ -0.18
PTPRK-203ENST00000368207 ADGRL3Q9HAR2 1447 aa13.95□□□□□ -0.18
PTPRK-203ENST00000368207 GOLGA6L9A6NEM1 432 aa13.94□□□□□ -0.18
PTPRK-203ENST00000368207 SP4Q02446 784 aa13.94□□□□□ -0.18
PTPRK-203ENST00000368207 FAM196AQ6ZSG2 479 aa13.94□□□□□ -0.18
PTPRK-203ENST00000368207 H0YHG0 523 aa13.94□□□□□ -0.18
PTPRK-203ENST00000368207 TSPYL1Q9H0U9 437 aa13.94□□□□□ -0.18
PTPRK-203ENST00000368207 JADE2Q9NQC1 790 aa13.94□□□□□ -0.18
PTPRK-203ENST00000368207 TTF2Q9UNY4 1162 aaKnown RBP13.94□□□□□ -0.18
PTPRK-203ENST00000368207 ABCA6Q8N139 1617 aa13.94□□□□□ -0.18
PTPRK-203ENST00000368207 CEP152O94986 1710 aa13.94□□□□□ -0.18
PTPRK-203ENST00000368207 ADGRB3O60242 1522 aa13.94□□□□□ -0.18
PTPRK-203ENST00000368207 CYP21A2P08686 494 aa13.94□□□□□ -0.18
PTPRK-203ENST00000368207 MYL5Q02045 173 aa13.94□□□□□ -0.18
PTPRK-203ENST00000368207 ARID5AQ03989 594 aa13.94□□□□□ -0.18
PTPRK-203ENST00000368207 TTC38Q5R3I4 469 aa13.94□□□□□ -0.18
PTPRK-203ENST00000368207 CLSTN2Q9H4D0 955 aa13.94□□□□□ -0.18
PTPRK-203ENST00000368207 CLCN1P35523 988 aa13.93□□□□□ -0.18
PTPRK-203ENST00000368207 PRPF4BQ13523 1007 aaKnown RBP13.93□□□□□ -0.18
PTPRK-203ENST00000368207 GBP3Q9H0R5 595 aa13.93□□□□□ -0.18
PTPRK-203ENST00000368207 QTRT2Q9H974 415 aaKnown RBP13.93□□□□□ -0.18
PTPRK-203ENST00000368207 ZNF202O95125 648 aa13.93□□□□□ -0.18
PTPRK-203ENST00000368207 IGKV5-2P06315 115 aa13.93□□□□□ -0.18
PTPRK-203ENST00000368207 CETN2P41208 172 aa13.93□□□□□ -0.18
PTPRK-203ENST00000368207 TXKP42681 527 aa13.93□□□□□ -0.18
PTPRK-203ENST00000368207 SLC1A4P43007 532 aa13.93□□□□□ -0.18
PTPRK-203ENST00000368207 EPHA10Q5JZY3 1008 aa13.93□□□□□ -0.18
PTPRK-203ENST00000368207 CCDC174Q6PII3 467 aa13.93□□□□□ -0.18
PTPRK-203ENST00000368207 TBC1D22AQ8WUA7 517 aa13.93□□□□□ -0.18
PTPRK-203ENST00000368207 DRC1Q96MC2 740 aa13.93□□□□□ -0.18
PTPRK-203ENST00000368207 ALS2CR12Q96Q35 445 aa13.93□□□□□ -0.18
PTPRK-203ENST00000368207 MTMR6Q9Y217 621 aa13.93□□□□□ -0.18
PTPRK-203ENST00000368207 STAMQ92783 540 aa13.93□□□□□ -0.18
PTPRK-203ENST00000368207 ZNF274Q96GC6 653 aaPredicted RBP13.92□□□□□ -0.18
PTPRK-203ENST00000368207 PUF60Q9UHX1 559 aaKnown RBP13.92□□□□□ -0.18
PTPRK-203ENST00000368207 PTCH1Q13635 1447 aa13.92□□□□□ -0.18
PTPRK-203ENST00000368207 MAST3O60307 1309 aa13.92□□□□□ -0.18
PTPRK-203ENST00000368207 CIAO1O76071 339 aa13.92□□□□□ -0.18
PTPRK-203ENST00000368207 DOK7Q18PE1 504 aa13.92□□□□□ -0.18
PTPRK-203ENST00000368207 CWC15Q9P013 229 aaKnown RBP13.92□□□□□ -0.18
PTPRK-203ENST00000368207 CCNT1O60563 726 aaKnown RBP13.92□□□□□ -0.18
PTPRK-203ENST00000368207 TRIM37O94972 964 aa13.92□□□□□ -0.18
PTPRK-203ENST00000368207 ZMYM1Q5SVZ6 1142 aa13.92□□□□□ -0.18
PTPRK-203ENST00000368207 MYSM1Q5VVJ2 828 aa13.92□□□□□ -0.18
PTPRK-203ENST00000368207 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.92□□□□□ -0.18
PTPRK-203ENST00000368207 TNKSO95271 1327 aa13.92□□□□□ -0.18
PTPRK-203ENST00000368207 CBX1P83916 185 aa13.92□□□□□ -0.18
PTPRK-203ENST00000368207 UBXN1Q04323 297 aa13.92□□□□□ -0.18
PTPRK-203ENST00000368207 USP28Q96RU2 1077 aa13.92□□□□□ -0.18
PTPRK-203ENST00000368207 USP40Q9NVE5 1235 aa13.92□□□□□ -0.18
PTPRK-203ENST00000368207 CPSF1Q10570 1443 aaKnown RBP13.92□□□□□ -0.18
PTPRK-203ENST00000368207 LRRIQ1Q96JM4 1722 aa13.92□□□□□ -0.18
PTPRK-203ENST00000368207 CUTAO60888 179 aa13.91□□□□□ -0.18
PTPRK-203ENST00000368207 ARID4AP29374 1257 aaPredicted RBP13.91□□□□□ -0.18
PTPRK-203ENST00000368207 CYLC1P35663 651 aaPredicted RBP13.91□□□□□ -0.18
PTPRK-203ENST00000368207 CCT6AP40227 531 aaKnown RBP13.91□□□□□ -0.18
PTPRK-203ENST00000368207 SCNN1DP51172 638 aa13.91□□□□□ -0.18
PTPRK-203ENST00000368207 POLA2Q14181 598 aa13.91□□□□□ -0.18
PTPRK-203ENST00000368207 CTNNBL1Q8WYA6 563 aaPredicted RBP13.91□□□□□ -0.18
PTPRK-203ENST00000368207 GPR108Q9NPR9 543 aa13.91□□□□□ -0.18
PTPRK-203ENST00000368207 DESP17661 470 aa13.91□□□□□ -0.18
PTPRK-203ENST00000368207 ALDH1B1P30837 517 aa13.91□□□□□ -0.18
PTPRK-203ENST00000368207 ERFEQ4G0M1 354 aa13.91□□□□□ -0.18
PTPRK-203ENST00000368207 PFKFB2O60825 505 aa13.91□□□□□ -0.18
PTPRK-203ENST00000368207 UBE3CQ15386 1083 aa13.91□□□□□ -0.18
PTPRK-203ENST00000368207 KIAA0825Q8IV33 1275 aa13.91□□□□□ -0.18
PTPRK-203ENST00000368207 ZNF804BA4D1E1 1349 aa13.91□□□□□ -0.18
PTPRK-203ENST00000368207 PPIP5K2O43314 1243 aa13.91□□□□□ -0.18
PTPRK-203ENST00000368207 FAM13AO94988 1023 aa13.91□□□□□ -0.18
PTPRK-203ENST00000368207 UBE4AQ14139 1066 aa13.91□□□□□ -0.18
PTPRK-203ENST00000368207 HLFQ16534 295 aa13.91□□□□□ -0.18
PTPRK-203ENST00000368207 ARPP21Q9UBL0 812 aaPredicted RBP13.91□□□□□ -0.18
PTPRK-203ENST00000368207 TRPC5Q9UL62 973 aaPredicted RBP13.91□□□□□ -0.18
PTPRK-203ENST00000368207 CBX8Q9HC52 389 aa13.9□□□□□ -0.18
PTPRK-203ENST00000368207 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.9□□□□□ -0.181e-8■■■□□ 16
PTPRK-203ENST00000368207 V9GYY5 206 aaPredicted RBP13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms