RNA–Protein interactions for RNA: ENST00000361198.9

LDB1-201, Transcript of LIM domain binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDB1, Length 2,285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-201ENST00000361198 PPARAQ07869 468 aa26.3■■□□□ 1.8
LDB1-201ENST00000361198 ZKSCAN3Q9BRR0 538 aa26.3■■□□□ 1.8
LDB1-201ENST00000361198 RTEL1Q9NZ71 1219 aa26.3■■□□□ 1.8
LDB1-201ENST00000361198 GOLGA8AA7E2F4 631 aa26.29■■□□□ 1.8
LDB1-201ENST00000361198 KIF28PB7ZC32 967 aa26.29■■□□□ 1.8
LDB1-201ENST00000361198 TRAPPC3LQ5T215 181 aa26.29■■□□□ 1.8
LDB1-201ENST00000361198 PRIMPOLQ96LW4 560 aa26.29■■□□□ 1.8
LDB1-201ENST00000361198 GOLPH3LQ9H4A5 285 aa26.29■■□□□ 1.8
LDB1-201ENST00000361198 TFCP2L1Q9NZI6 479 aa26.29■■□□□ 1.8
LDB1-201ENST00000361198 SLC12A7Q9Y666 1083 aa26.29■■□□□ 1.8
LDB1-201ENST00000361198 EP400Q96L91 3159 aa26.29■■□□□ 1.8
LDB1-201ENST00000361198 AFF2P51816 1311 aa26.29■■□□□ 1.8
LDB1-201ENST00000361198 ME1P48163 572 aa26.28■■□□□ 1.8
LDB1-201ENST00000361198 KIF23Q02241 960 aaPredicted RBP26.28■■□□□ 1.8
LDB1-201ENST00000361198 CPLX2Q6PUV4 134 aaKnown RBP26.28■■□□□ 1.8
LDB1-201ENST00000361198 ALG1Q9BT22 464 aa26.28■■□□□ 1.8
LDB1-201ENST00000361198 CCDC69A6NI79 296 aa26.28■■□□□ 1.8
LDB1-201ENST00000361198 DYNLL1P63167 89 aaKnown RBP26.28■■□□□ 1.8
LDB1-201ENST00000361198 FAM196AQ6ZSG2 479 aa26.28■■□□□ 1.8
LDB1-201ENST00000361198 BRAPQ7Z569 592 aa26.28■■□□□ 1.8
LDB1-201ENST00000361198 KIAA1524Q8TCG1 905 aa26.28■■□□□ 1.8
LDB1-201ENST00000361198 ANKRD2Q9GZV1 360 aa26.28■■□□□ 1.8
LDB1-201ENST00000361198 MINDY4BA8MYZ0 360 aa26.27■■□□□ 1.8
LDB1-201ENST00000361198 MYSM1Q5VVJ2 828 aa26.27■■□□□ 1.8
LDB1-201ENST00000361198 MYRIPQ8NFW9 859 aa26.27■■□□□ 1.8
LDB1-201ENST00000361198 CLIC4Q9Y696 253 aa26.27■■□□□ 1.8
LDB1-201ENST00000361198 GOLGA6L6A8MZA4 724 aa26.27■■□□□ 1.8
LDB1-201ENST00000361198 SMIM22K7EJ46 135 aa26.27■■□□□ 1.8
LDB1-201ENST00000361198 SEMA3EO15041 775 aa26.27■■□□□ 1.8
LDB1-201ENST00000361198 NPHP1O15259 732 aa26.27■■□□□ 1.8
LDB1-201ENST00000361198 RANBP6O60518 1105 aaKnown RBP26.27■■□□□ 1.8
LDB1-201ENST00000361198 KCNF1Q9H3M0 494 aa26.27■■□□□ 1.8
LDB1-201ENST00000361198 ONECUT3O60422 494 aaPredicted RBP26.26■■□□□ 1.79
LDB1-201ENST00000361198 HIBADHP31937 336 aaKnown RBP26.26■■□□□ 1.79
LDB1-201ENST00000361198 RBM10P98175 930 aaKnown RBP26.26■■□□□ 1.79
LDB1-201ENST00000361198 SNW1Q13573 536 aaKnown RBP26.26■■□□□ 1.79
LDB1-201ENST00000361198 DNTTIP2Q5QJE6 756 aaKnown RBP26.26■■□□□ 1.79
LDB1-201ENST00000361198 LINC00301Q8NCQ3 95 aa26.26■■□□□ 1.79
LDB1-201ENST00000361198 RNF41Q9H4P4 317 aaPredicted RBP26.26■■□□□ 1.79
LDB1-201ENST00000361198 LRRC4BQ9NT99 713 aa26.26■■□□□ 1.79
LDB1-201ENST00000361198 PCDHA7Q9UN72 937 aa26.26■■□□□ 1.79
LDB1-201ENST00000361198 LUZP1Q86V48 1076 aa26.26■■□□□ 1.79
LDB1-201ENST00000361198 TNRC6CQ9HCJ0 1690 aaKnown RBP26.25■■□□□ 1.79
LDB1-201ENST00000361198 IARSP41252 1262 aaKnown RBP26.25■■□□□ 1.79
LDB1-201ENST00000361198 ANO6Q4KMQ2 910 aa26.25■■□□□ 1.79
LDB1-201ENST00000361198 SEPT12Q8IYM1 358 aa26.25■■□□□ 1.79
LDB1-201ENST00000361198 RGS22Q8NE09 1264 aa26.25■■□□□ 1.79
LDB1-201ENST00000361198 CBX8Q9HC52 389 aa26.25■■□□□ 1.79
LDB1-201ENST00000361198 FAM13BQ9NYF5 915 aa26.25■■□□□ 1.79
LDB1-201ENST00000361198 MYH13Q9UKX3 1938 aa26.25■■□□□ 1.79
LDB1-201ENST00000361198 NFIXQ14938 502 aa26.25■■□□□ 1.79
LDB1-201ENST00000361198 WTAPQ15007 396 aa26.25■■□□□ 1.79
LDB1-201ENST00000361198 SART3Q15020 963 aaKnown RBP26.25■■□□□ 1.79
LDB1-201ENST00000361198 TXNRD3Q86VQ6 643 aa26.25■■□□□ 1.79
LDB1-201ENST00000361198 ENGASEQ8NFI3 743 aa26.25■■□□□ 1.79
LDB1-201ENST00000361198 NSUN4Q96CB9 384 aaKnown RBP26.25■■□□□ 1.79
LDB1-201ENST00000361198 POLR3EQ9NVU0 708 aa26.25■■□□□ 1.79
LDB1-201ENST00000361198 ANAPC4Q9UJX5 808 aa26.25■■□□□ 1.79
LDB1-201ENST00000361198 TAOK2Q9UL54 1235 aa26.25■■□□□ 1.79
LDB1-201ENST00000361198 BAZ2AQ9UIF9 1905 aaKnown RBP26.24■■□□□ 1.79
LDB1-201ENST00000361198 UBE2Q2LH0YL09 131 aa26.24■■□□□ 1.79
LDB1-201ENST00000361198 KRT40Q6A162 431 aa26.24■■□□□ 1.79
LDB1-201ENST00000361198 CCDC73Q6ZRK6 1079 aa26.24■■□□□ 1.79
LDB1-201ENST00000361198 SYNE3Q6ZMZ3 975 aa26.23■■□□□ 1.79
LDB1-201ENST00000361198 C17orf53Q8N3J3 647 aaPredicted RBP26.23■■□□□ 1.79
LDB1-201ENST00000361198 ECM29Q5VYK3 1845 aa26.23■■□□□ 1.79
LDB1-201ENST00000361198 MECOMQ03112 1051 aa26.23■■□□□ 1.79
LDB1-201ENST00000361198 STK38Q15208 465 aa26.23■■□□□ 1.79
LDB1-201ENST00000361198 MTERF4Q7Z6M4 381 aaKnown RBP26.23■■□□□ 1.79
LDB1-201ENST00000361198 FSIP1Q8NA03 581 aa26.23■■□□□ 1.79
LDB1-201ENST00000361198 TDRD7Q8NHU6 1098 aaKnown RBP26.23■■□□□ 1.79
LDB1-201ENST00000361198 ERICH2A1L162 156 aa26.22■■□□□ 1.79
LDB1-201ENST00000361198 CAVIN2O95810 425 aa26.22■■□□□ 1.79
LDB1-201ENST00000361198 GTF2F1P35269 517 aaKnown RBP eCLIP26.22■■□□□ 1.793e-7■□□□□ 9.7
LDB1-201ENST00000361198 FAM160A1Q05DH4 1040 aa26.22■■□□□ 1.79
LDB1-201ENST00000361198 ADALQ6DHV7 355 aa26.22■■□□□ 1.79
LDB1-201ENST00000361198 SLC51AQ86UW1 340 aa26.22■■□□□ 1.79
LDB1-201ENST00000361198 MTA3Q9BTC8 594 aa26.22■■□□□ 1.79
LDB1-201ENST00000361198 PDS5AQ29RF7 1337 aaKnown RBP26.22■■□□□ 1.79
LDB1-201ENST00000361198 YEATS4O95619 227 aa26.22■■□□□ 1.79
LDB1-201ENST00000361198 CHAF1AQ13111 956 aaPredicted RBP26.22■■□□□ 1.79
LDB1-201ENST00000361198 SLC26A6Q9BXS9 759 aa26.22■■□□□ 1.79
LDB1-201ENST00000361198 NID2Q14112 1375 aa26.21■■□□□ 1.79
LDB1-201ENST00000361198 CYP2D7A0A087X1C5 515 aa26.21■■□□□ 1.79
LDB1-201ENST00000361198 PRDX5P30044 214 aa26.21■■□□□ 1.79
LDB1-201ENST00000361198 KCNG4Q8TDN1 519 aa26.21■■□□□ 1.79
LDB1-201ENST00000361198 BRIP1Q9BX63 1249 aa26.21■■□□□ 1.79
LDB1-201ENST00000361198 IFNAR1P17181 557 aa26.21■■□□□ 1.79
LDB1-201ENST00000361198 HSPA1LP34931 641 aa26.21■■□□□ 1.79
LDB1-201ENST00000361198 SF3A1Q15459 793 aaKnown RBP26.21■■□□□ 1.79
LDB1-201ENST00000361198 SPC24Q8NBT2 197 aa26.21■■□□□ 1.79
LDB1-201ENST00000361198 BCL11BQ9C0K0 894 aaPredicted RBP26.21■■□□□ 1.79
LDB1-201ENST00000361198 PYCARDQ9ULZ3 195 aa26.21■■□□□ 1.79
LDB1-201ENST00000361198 IRS2Q9Y4H2 1338 aa26.2■■□□□ 1.79
LDB1-201ENST00000361198 SPTLC2O15270 562 aa26.2■■□□□ 1.78
LDB1-201ENST00000361198 SSRP1Q08945 709 aaKnown RBP26.2■■□□□ 1.78
LDB1-201ENST00000361198 TMTC2Q8N394 836 aa26.2■■□□□ 1.78
LDB1-201ENST00000361198 ESR2Q92731 530 aa26.2■■□□□ 1.78
LDB1-201ENST00000361198 TRPC5Q9UL62 973 aaPredicted RBP26.2■■□□□ 1.78
LDB1-201ENST00000361198 JAG2Q9Y219 1238 aa26.2■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms