RNA–Protein interactions for RNA: ENST00000353411.10

SKP1-202, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SKP1, Length 9,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-202ENST00000353411 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.62□□□□□ -1.512e-6■■■□□ 18.1
SKP1-202ENST00000353411 CCDC68Q9H2F9 335 aa5.62□□□□□ -1.51
SKP1-202ENST00000353411 BMP2KQ9NSY1 1161 aaPredicted RBP5.62□□□□□ -1.51
SKP1-202ENST00000353411 TXLNGQ9NUQ3 528 aa5.62□□□□□ -1.51
SKP1-202ENST00000353411 PCYT1AP49585 367 aa5.61□□□□□ -1.51
SKP1-202ENST00000353411 SEC23IPQ9Y6Y8 1000 aaKnown RBP5.61□□□□□ -1.51
SKP1-202ENST00000353411 RGS12O14924 1447 aa5.61□□□□□ -1.51
SKP1-202ENST00000353411 TEFQ10587 303 aa5.61□□□□□ -1.51
SKP1-202ENST00000353411 VPS52Q8N1B4 723 aa5.61□□□□□ -1.51
SKP1-202ENST00000353411 ANKRD44Q8N8A2 993 aa5.61□□□□□ -1.51
SKP1-202ENST00000353411 ANKRD27Q96NW4 1050 aa5.61□□□□□ -1.51
SKP1-202ENST00000353411 MOV10L1Q9BXT6 1211 aaKnown RBP5.61□□□□□ -1.51
SKP1-202ENST00000353411 RMI1Q9H9A7 625 aa5.61□□□□□ -1.51
SKP1-202ENST00000353411 MIS18AQ9NYP9 233 aa5.61□□□□□ -1.51
SKP1-202ENST00000353411 NRBP1Q9UHY1 535 aa5.61□□□□□ -1.51
SKP1-202ENST00000353411 FERP16591 822 aa5.61□□□□□ -1.51
SKP1-202ENST00000353411 ABCD1P33897 745 aa5.61□□□□□ -1.51
SKP1-202ENST00000353411 DNA2P51530 1060 aa5.61□□□□□ -1.51
SKP1-202ENST00000353411 MRPS35P82673 323 aaKnown RBP5.61□□□□□ -1.51
SKP1-202ENST00000353411 FBXW10Q5XX13 1052 aa5.61□□□□□ -1.51
SKP1-202ENST00000353411 MAGI2Q86UL8 1455 aa5.61□□□□□ -1.51
SKP1-202ENST00000353411 RUFY3Q7L099 469 aa5.61□□□□□ -1.51
SKP1-202ENST00000353411 ITFG2Q969R8 447 aa5.61□□□□□ -1.51
SKP1-202ENST00000353411 MIEF2Q96C03 454 aa5.61□□□□□ -1.51
SKP1-202ENST00000353411 CAND2O75155 1236 aa5.61□□□□□ -1.51
SKP1-202ENST00000353411 ADCY2Q08462 1091 aa5.61□□□□□ -1.51
SKP1-202ENST00000353411 PPP1R21Q6ZMI0 780 aa5.61□□□□□ -1.51
SKP1-202ENST00000353411 CCDC80Q76M96 950 aa5.61□□□□□ -1.51
SKP1-202ENST00000353411 AACSQ86V21 672 aa5.61□□□□□ -1.51
SKP1-202ENST00000353411 RUBCNQ92622 972 aa5.61□□□□□ -1.51
SKP1-202ENST00000353411 NEK1Q96PY6 1258 aa5.61□□□□□ -1.51
SKP1-202ENST00000353411 LLPHQ9BRT6 129 aaKnown RBP5.61□□□□□ -1.51
SKP1-202ENST00000353411 KIF9Q9HAQ2 790 aa5.61□□□□□ -1.51
SKP1-202ENST00000353411 BCAP29Q9UHQ4 241 aa5.61□□□□□ -1.51
SKP1-202ENST00000353411 CTNNA1P35221 906 aaKnown RBP5.61□□□□□ -1.51
SKP1-202ENST00000353411 SCRN1Q12765 414 aa5.61□□□□□ -1.51
SKP1-202ENST00000353411 DIXDC1Q155Q3 683 aa5.61□□□□□ -1.51
SKP1-202ENST00000353411 MFN1Q8IWA4 741 aa5.61□□□□□ -1.51
SKP1-202ENST00000353411 IQUBQ8NA54 791 aa5.61□□□□□ -1.51
SKP1-202ENST00000353411 MLKLQ8NB16 471 aa5.61□□□□□ -1.51
SKP1-202ENST00000353411 SPOCK2Q92563 424 aa5.61□□□□□ -1.51
SKP1-202ENST00000353411 THUMPD2Q9BTF0 503 aaKnown RBP5.61□□□□□ -1.51
SKP1-202ENST00000353411 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.61□□□□□ -1.51
SKP1-202ENST00000353411 NSD2O96028 1365 aa5.61□□□□□ -1.51
SKP1-202ENST00000353411 CTTNBP2Q8WZ74 1663 aa5.61□□□□□ -1.51
SKP1-202ENST00000353411 CHRM1P11229 460 aaPredicted RBP5.61□□□□□ -1.51
SKP1-202ENST00000353411 MYO1EQ12965 1108 aa5.61□□□□□ -1.51
SKP1-202ENST00000353411 SPTY2D1Q68D10 685 aaPredicted RBP5.61□□□□□ -1.51
SKP1-202ENST00000353411 EMBQ6PCB8 327 aa5.61□□□□□ -1.51
SKP1-202ENST00000353411 ANKLE2Q86XL3 938 aa5.61□□□□□ -1.51
SKP1-202ENST00000353411 RNF217Q8TC41 542 aa5.61□□□□□ -1.51
SKP1-202ENST00000353411 ZNF653Q96CK0 615 aa5.61□□□□□ -1.51
SKP1-202ENST00000353411 STK26Q9P289 416 aa5.61□□□□□ -1.51
SKP1-202ENST00000353411 AKAP2Q9Y2D5 859 aa5.61□□□□□ -1.51
SKP1-202ENST00000353411 SCINQ9Y6U3 715 aa5.61□□□□□ -1.51
SKP1-202ENST00000353411 ZNF644Q9H582 1327 aaPredicted RBP5.61□□□□□ -1.51
SKP1-202ENST00000353411 EIF2AK4Q9P2K8 1649 aaKnown RBP5.61□□□□□ -1.51
SKP1-202ENST00000353411 MACROD2A1Z1Q3 448 aa5.6□□□□□ -1.51
SKP1-202ENST00000353411 PLA2G4DQ86XP0 818 aa5.6□□□□□ -1.51
SKP1-202ENST00000353411 KLHL29Q96CT2 875 aa5.6□□□□□ -1.51
SKP1-202ENST00000353411 NUP58Q9BVL2 599 aa5.6□□□□□ -1.51
SKP1-202ENST00000353411 OSBPL1AQ9BXW6 950 aa5.6□□□□□ -1.51
SKP1-202ENST00000353411 ABCB6Q9NP58 842 aa5.6□□□□□ -1.51
SKP1-202ENST00000353411 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.6□□□□□ -1.51
SKP1-202ENST00000353411 NFE2L2Q16236 605 aa5.6□□□□□ -1.51
SKP1-202ENST00000353411 ATP6V0A4Q9HBG4 840 aa5.6□□□□□ -1.51
SKP1-202ENST00000353411 ZCCHC17Q9NP64 241 aaKnown RBP5.6□□□□□ -1.51
SKP1-202ENST00000353411 KCNK9Q9NPC2 374 aa5.6□□□□□ -1.51
SKP1-202ENST00000353411 RGL1Q9NZL6 768 aa5.6□□□□□ -1.51
SKP1-202ENST00000353411 IKBKGQ9Y6K9 419 aa5.6□□□□□ -1.51
SKP1-202ENST00000353411 PCF11O94913 1555 aaKnown RBP5.6□□□□□ -1.51
SKP1-202ENST00000353411 ATP5HO75947 161 aa5.6□□□□□ -1.51
SKP1-202ENST00000353411 TMCC1O94876 653 aa5.6□□□□□ -1.51
SKP1-202ENST00000353411 CHGBP05060 677 aa5.6□□□□□ -1.51
SKP1-202ENST00000353411 ATF3P18847 181 aa5.6□□□□□ -1.51
SKP1-202ENST00000353411 NR1D1P20393 614 aa5.6□□□□□ -1.51
SKP1-202ENST00000353411 POLD1P28340 1107 aa5.6□□□□□ -1.51
SKP1-202ENST00000353411 UBXN1Q04323 297 aa5.6□□□□□ -1.51
SKP1-202ENST00000353411 PPP2R5EQ16537 467 aa5.6□□□□□ -1.51
SKP1-202ENST00000353411 KRT71Q3SY84 523 aa5.6□□□□□ -1.51
SKP1-202ENST00000353411 GGT6Q6P531 493 aa5.6□□□□□ -1.51
SKP1-202ENST00000353411 ACRBPQ8NEB7 543 aa5.6□□□□□ -1.51
SKP1-202ENST00000353411 ZBTB10Q96DT7 871 aa5.6□□□□□ -1.51
SKP1-202ENST00000353411 STMN1P16949 149 aa5.6□□□□□ -1.51
SKP1-202ENST00000353411 RNASELQ05823 741 aaKnown RBP5.6□□□□□ -1.51
SKP1-202ENST00000353411 HHATQ5VTY9 493 aa5.6□□□□□ -1.51
SKP1-202ENST00000353411 BRF1Q92994 677 aa5.6□□□□□ -1.51
SKP1-202ENST00000353411 HAUS4Q9H6D7 363 aa5.6□□□□□ -1.51
SKP1-202ENST00000353411 KIAA0556O60303 1618 aa5.6□□□□□ -1.51
SKP1-202ENST00000353411 ATP2A2P16615 1042 aaKnown RBP5.6□□□□□ -1.51
SKP1-202ENST00000353411 PAPOLAP51003 745 aaKnown RBP5.6□□□□□ -1.51
SKP1-202ENST00000353411 ACTN3Q08043 901 aaPredicted RBP5.6□□□□□ -1.51
SKP1-202ENST00000353411 TRPC3Q13507 836 aa5.6□□□□□ -1.51
SKP1-202ENST00000353411 CFAP157Q5JU67 520 aa5.6□□□□□ -1.51
SKP1-202ENST00000353411 STAMBPL1Q96FJ0 436 aa5.6□□□□□ -1.51
SKP1-202ENST00000353411 DDX21Q9NR30 783 aaKnown RBP eCLIP5.6□□□□□ -1.51
SKP1-202ENST00000353411 C9orf84Q5VXU9 1444 aa5.6□□□□□ -1.51
SKP1-202ENST00000353411 FAM135AQ9P2D6 1515 aa5.6□□□□□ -1.51
SKP1-202ENST00000353411 GMNNO75496 209 aa5.6□□□□□ -1.51
SKP1-202ENST00000353411 HMOX1P09601 288 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 113.7 ms