RNA–Protein interactions for RNA: ENST00000344722.5

SMC4-201, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-201ENST00000344722 FAM204AQ9H8W3 233 aa20.23■□□□□ 0.83
SMC4-201ENST00000344722 JRKLQ9Y4A0 524 aa20.23■□□□□ 0.83
SMC4-201ENST00000344722 MAP3K5Q99683 1374 aa20.23■□□□□ 0.83
SMC4-201ENST00000344722 IQCDQ96DY2 449 aa20.23■□□□□ 0.83
SMC4-201ENST00000344722 CWF19L2Q2TBE0 894 aaKnown RBP20.23■□□□□ 0.83
SMC4-201ENST00000344722 LONRF3Q496Y0 759 aa20.23■□□□□ 0.83
SMC4-201ENST00000344722 NUP153P49790 1475 aaKnown RBP20.23■□□□□ 0.83
SMC4-201ENST00000344722 CHL1O00533 1208 aa20.22■□□□□ 0.83
SMC4-201ENST00000344722 CLCN6P51797 869 aa20.22■□□□□ 0.83
SMC4-201ENST00000344722 KRT79Q5XKE5 535 aa20.22■□□□□ 0.83
SMC4-201ENST00000344722 GSTA5Q7RTV2 222 aa20.22■□□□□ 0.83
SMC4-201ENST00000344722 SEL1L2Q5TEA6 688 aa20.22■□□□□ 0.83
SMC4-201ENST00000344722 NCBP1Q09161 790 aaKnown RBP20.22■□□□□ 0.83
SMC4-201ENST00000344722 PDLIM2Q96JY6 352 aa20.22■□□□□ 0.83
SMC4-201ENST00000344722 TEX13AQ9BXU3 409 aaPredicted RBP20.22■□□□□ 0.83
SMC4-201ENST00000344722 BABAM1Q9NWV8 329 aa20.22■□□□□ 0.83
SMC4-201ENST00000344722 SEPT6Q14141 434 aa20.22■□□□□ 0.83
SMC4-201ENST00000344722 CCDC38Q502W7 563 aa20.22■□□□□ 0.83
SMC4-201ENST00000344722 DESI2Q9BSY9 194 aa20.22■□□□□ 0.83
SMC4-201ENST00000344722 TAB2Q9NYJ8 693 aa20.22■□□□□ 0.83
SMC4-201ENST00000344722 CDC23Q9UJX2 597 aa20.22■□□□□ 0.83
SMC4-201ENST00000344722 PHF8Q9UPP1 1060 aa20.22■□□□□ 0.83
SMC4-201ENST00000344722 RBM5P52756 815 aaKnown RBP eCLIP20.22■□□□□ 0.83
SMC4-201ENST00000344722 PNOCQ13519 176 aa20.22■□□□□ 0.83
SMC4-201ENST00000344722 PFKFB1P16118 471 aa20.21■□□□□ 0.83
SMC4-201ENST00000344722 APBA1Q02410 837 aa20.21■□□□□ 0.83
SMC4-201ENST00000344722 SNCBQ16143 134 aa20.21■□□□□ 0.83
SMC4-201ENST00000344722 CEP128Q6ZU80 1094 aa20.21■□□□□ 0.83
SMC4-201ENST00000344722 SLF2Q8IX21 1173 aa20.21■□□□□ 0.83
SMC4-201ENST00000344722 C6orf50Q9HD87 102 aa20.21■□□□□ 0.83
SMC4-201ENST00000344722 CYP7A1P22680 504 aa20.21■□□□□ 0.83
SMC4-201ENST00000344722 OTUD7BQ6GQQ9 843 aa20.21■□□□□ 0.83
SMC4-201ENST00000344722 GDAP1L1Q96MZ0 367 aa20.21■□□□□ 0.83
SMC4-201ENST00000344722 GCC2Q8IWJ2 1684 aa20.21■□□□□ 0.83
SMC4-201ENST00000344722 FBXO38Q6PIJ6 1188 aa20.21■□□□□ 0.83
SMC4-201ENST00000344722 CSGALNACT2Q8N6G5 542 aa20.21■□□□□ 0.83
SMC4-201ENST00000344722 SBNO2Q9Y2G9 1366 aa20.21■□□□□ 0.83
SMC4-201ENST00000344722 TMEM110-MUSTN1A8MSY1 372 aa20.21■□□□□ 0.83
SMC4-201ENST00000344722 ZNF174Q15697 407 aa20.21■□□□□ 0.83
SMC4-201ENST00000344722 FYB2Q5VWT5 728 aa20.21■□□□□ 0.83
SMC4-201ENST00000344722 PPANQ9NQ55 473 aaKnown RBP20.21■□□□□ 0.83
SMC4-201ENST00000344722 USP19O94966 1318 aa20.2■□□□□ 0.82
SMC4-201ENST00000344722 MAGEA1P43355 309 aa20.2■□□□□ 0.82
SMC4-201ENST00000344722 CCT5P48643 541 aa20.2■□□□□ 0.82
SMC4-201ENST00000344722 NPATQ14207 1427 aa20.2■□□□□ 0.82
SMC4-201ENST00000344722 PAF1Q8N7H5 531 aa20.2■□□□□ 0.82
SMC4-201ENST00000344722 TSNARE1Q96NA8 513 aa20.2■□□□□ 0.82
SMC4-201ENST00000344722 PPP1R12CQ9BZL4 782 aa20.2■□□□□ 0.82
SMC4-201ENST00000344722 SERPINA10Q9UK55 444 aa20.2■□□□□ 0.82
SMC4-201ENST00000344722 NEDD9Q14511 834 aa20.2■□□□□ 0.82
SMC4-201ENST00000344722 CCDC174Q6PII3 467 aa20.2■□□□□ 0.82
SMC4-201ENST00000344722 TRIM58Q8NG06 486 aa20.2■□□□□ 0.82
SMC4-201ENST00000344722 ANGEL1Q9UNK9 670 aaKnown RBP20.2■□□□□ 0.82
SMC4-201ENST00000344722 ABCC1P33527 1531 aa20.2■□□□□ 0.82
SMC4-201ENST00000344722 FLT4P35916 1363 aa20.2■□□□□ 0.82
SMC4-201ENST00000344722 LDHCP07864 332 aa20.2■□□□□ 0.82
SMC4-201ENST00000344722 FERP16591 822 aa20.2■□□□□ 0.82
SMC4-201ENST00000344722 NAPAP54920 295 aa20.2■□□□□ 0.82
SMC4-201ENST00000344722 MYSM1Q5VVJ2 828 aa20.2■□□□□ 0.82
SMC4-201ENST00000344722 BAG3O95817 575 aa20.2■□□□□ 0.82
SMC4-201ENST00000344722 AP1ARQ63HQ0 302 aa20.2■□□□□ 0.82
SMC4-201ENST00000344722 CNNM4Q6P4Q7 775 aa20.2■□□□□ 0.82
SMC4-201ENST00000344722 CRACR2BQ8N4Y2 399 aaPredicted RBP20.2■□□□□ 0.82
SMC4-201ENST00000344722 MICAL1Q8TDZ2 1067 aa20.2■□□□□ 0.82
SMC4-201ENST00000344722 TPCN1Q9ULQ1 816 aa20.2■□□□□ 0.82
SMC4-201ENST00000344722 CCDC151A5D8V7 595 aa20.19■□□□□ 0.82
SMC4-201ENST00000344722 USP37Q86T82 979 aa20.19■□□□□ 0.82
SMC4-201ENST00000344722 USP28Q96RU2 1077 aa20.19■□□□□ 0.82
SMC4-201ENST00000344722 DNAI2Q9GZS0 605 aa20.19■□□□□ 0.82
SMC4-201ENST00000344722 VEZTQ9HBM0 779 aa20.19■□□□□ 0.82
SMC4-201ENST00000344722 SLFNL1Q499Z3 407 aa20.19■□□□□ 0.82
SMC4-201ENST00000344722 VSIG1Q86XK7 387 aa20.19■□□□□ 0.82
SMC4-201ENST00000344722 TRMT44Q8IYL2 757 aaKnown RBP20.19■□□□□ 0.82
SMC4-201ENST00000344722 RIPOR2Q9Y4F9 1068 aa20.19■□□□□ 0.82
SMC4-201ENST00000344722 ADGRL2O95490 1459 aa20.19■□□□□ 0.82
SMC4-201ENST00000344722 SYCP2Q9BX26 1530 aa20.19■□□□□ 0.82
SMC4-201ENST00000344722 SLC9C1Q4G0N8 1177 aa20.19■□□□□ 0.82
SMC4-201ENST00000344722 PPP4R3AQ6IN85 833 aa20.19■□□□□ 0.82
SMC4-201ENST00000344722 DIS3L2Q8IYB7 885 aaKnown RBP20.19■□□□□ 0.82
SMC4-201ENST00000344722 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.19■□□□□ 0.82
SMC4-201ENST00000344722 GPTP24298 496 aa20.19■□□□□ 0.82
SMC4-201ENST00000344722 RAPGEF1Q13905 1077 aa20.19■□□□□ 0.82
SMC4-201ENST00000344722 TNNI3KQ59H18 835 aa20.19■□□□□ 0.82
SMC4-201ENST00000344722 KRT40Q6A162 431 aa20.19■□□□□ 0.82
SMC4-201ENST00000344722 RNF10Q8N5U6 811 aaKnown RBP20.19■□□□□ 0.82
SMC4-201ENST00000344722 FERMT2Q96AC1 680 aa20.19■□□□□ 0.82
SMC4-201ENST00000344722 HAUS4Q9H6D7 363 aa20.19■□□□□ 0.82
SMC4-201ENST00000344722 FPGT-TNNI3KV9GXZ4 949 aa20.19■□□□□ 0.82
SMC4-201ENST00000344722 CMA1P23946 247 aa20.18■□□□□ 0.82
SMC4-201ENST00000344722 CDC5LQ99459 802 aaKnown RBP20.18■□□□□ 0.82
SMC4-201ENST00000344722 KIAA0232Q92628 1395 aa20.18■□□□□ 0.82
SMC4-201ENST00000344722 IL13P35225 146 aa20.18■□□□□ 0.82
SMC4-201ENST00000344722 PDE4DQ08499 809 aa20.18■□□□□ 0.82
SMC4-201ENST00000344722 CLUL1Q15846 466 aa20.18■□□□□ 0.82
SMC4-201ENST00000344722 SV2BQ7L1I2 683 aa20.18■□□□□ 0.82
SMC4-201ENST00000344722 LAMC3Q9Y6N6 1575 aa20.18■□□□□ 0.82
SMC4-201ENST00000344722 FOXO3O43524 673 aa20.18■□□□□ 0.82
SMC4-201ENST00000344722 PNMA6AP0CW24 399 aaPredicted RBP20.18■□□□□ 0.82
SMC4-201ENST00000344722 TRIML1Q8N9V2 468 aa20.18■□□□□ 0.82
SMC4-201ENST00000344722 ATP6V0A2Q9Y487 856 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 112.5 ms