RNA–Protein interactions for RNA: ENST00000344626.8

SMARCA4-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best) BASIC

Gene SMARCA4, Length 5,392 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-201ENST00000344626 SETBP1Q9Y6X0 1596 aa18.7■□□□□ 0.58
SMARCA4-201ENST00000344626 EPB41L2O43491 1005 aaKnown RBP18.7■□□□□ 0.58
SMARCA4-201ENST00000344626 PPP2R5BQ15173 497 aa18.7■□□□□ 0.58
SMARCA4-201ENST00000344626 CETN2P41208 172 aa18.7■□□□□ 0.58
SMARCA4-201ENST00000344626 SPC25Q9HBM1 224 aa18.7■□□□□ 0.58
SMARCA4-201ENST00000344626 SLC5A4Q9NY91 659 aa18.7■□□□□ 0.58
SMARCA4-201ENST00000344626 STAT6P42226 847 aa18.69■□□□□ 0.58
SMARCA4-201ENST00000344626 CCDC40Q4G0X9 1142 aa18.69■□□□□ 0.58
SMARCA4-201ENST00000344626 KRT79Q5XKE5 535 aa18.69■□□□□ 0.58
SMARCA4-201ENST00000344626 CCDC174Q6PII3 467 aa18.69■□□□□ 0.58
SMARCA4-201ENST00000344626 SDR42E1Q8WUS8 393 aa18.69■□□□□ 0.58
SMARCA4-201ENST00000344626 TECPR2O15040 1411 aa18.69■□□□□ 0.58
SMARCA4-201ENST00000344626 LZTS2Q9BRK4 669 aa18.69■□□□□ 0.58
SMARCA4-201ENST00000344626 E9PCH4 1651 aa18.69■□□□□ 0.58
SMARCA4-201ENST00000344626 NOP56O00567 594 aaKnown RBP18.69■□□□□ 0.58
SMARCA4-201ENST00000344626 USH1GQ495M9 461 aa18.69■□□□□ 0.58
SMARCA4-201ENST00000344626 EAF2Q96CJ1 260 aaPredicted RBP18.69■□□□□ 0.58
SMARCA4-201ENST00000344626 CTDSPL2Q05D32 466 aa18.69■□□□□ 0.58
SMARCA4-201ENST00000344626 FAM47AQ5JRC9 791 aa18.69■□□□□ 0.58
SMARCA4-201ENST00000344626 CCDC181Q5TID7 509 aa18.69■□□□□ 0.58
SMARCA4-201ENST00000344626 ERCC4Q92889 916 aaPredicted RBP18.69■□□□□ 0.58
SMARCA4-201ENST00000344626 IQCA1LA6NCM1 817 aa18.68■□□□□ 0.58
SMARCA4-201ENST00000344626 NEBLO76041 1014 aa18.68■□□□□ 0.58
SMARCA4-201ENST00000344626 FAM43AQ8N2R8 423 aa18.68■□□□□ 0.58
SMARCA4-201ENST00000344626 SYCE3A1L190 88 aa18.68■□□□□ 0.58
SMARCA4-201ENST00000344626 PATL2C9JE40 543 aaKnown RBP18.68■□□□□ 0.58
SMARCA4-201ENST00000344626 ERLIN2O94905 339 aa18.68■□□□□ 0.58
SMARCA4-201ENST00000344626 ADORA1P30542 326 aa18.68■□□□□ 0.58
SMARCA4-201ENST00000344626 PTPRUQ92729 1446 aa18.68■□□□□ 0.58
SMARCA4-201ENST00000344626 TRPM1Q7Z4N2 1603 aa18.68■□□□□ 0.58
SMARCA4-201ENST00000344626 SYKP43405 635 aa18.68■□□□□ 0.58
SMARCA4-201ENST00000344626 AK2P54819 239 aa18.68■□□□□ 0.58
SMARCA4-201ENST00000344626 FAM227BQ96M60 508 aa18.68■□□□□ 0.58
SMARCA4-201ENST00000344626 COPRSQ9NQ92 184 aa18.68■□□□□ 0.58
SMARCA4-201ENST00000344626 PPRC1Q5VV67 1664 aaKnown RBP18.68■□□□□ 0.58
SMARCA4-201ENST00000344626 MTIF2P46199 727 aaKnown RBP18.68■□□□□ 0.58
SMARCA4-201ENST00000344626 UBE2HP62256 183 aa18.68■□□□□ 0.58
SMARCA4-201ENST00000344626 PNPLA6Q8IY17 1366 aa18.67■□□□□ 0.58
SMARCA4-201ENST00000344626 CFBP00751 764 aa18.67■□□□□ 0.58
SMARCA4-201ENST00000344626 MIGA2Q7L4E1 593 aa18.67■□□□□ 0.58
SMARCA4-201ENST00000344626 TTLL11Q8NHH1 800 aa18.67■□□□□ 0.58
SMARCA4-201ENST00000344626 TNPO1Q92973 898 aaKnown RBP18.67■□□□□ 0.58
SMARCA4-201ENST00000344626 SNX21Q969T3 373 aa18.67■□□□□ 0.58
SMARCA4-201ENST00000344626 COA1Q9GZY4 146 aa18.67■□□□□ 0.58
SMARCA4-201ENST00000344626 IREB2P48200 963 aaKnown RBP18.67■□□□□ 0.58
SMARCA4-201ENST00000344626 GPR108Q9NPR9 543 aa18.67■□□□□ 0.58
SMARCA4-201ENST00000344626 KIDINS220Q9ULH0 1771 aa18.67■□□□□ 0.58
SMARCA4-201ENST00000344626 BRAPQ7Z569 592 aa18.67■□□□□ 0.58
SMARCA4-201ENST00000344626 TTC16Q8NEE8 873 aa18.67■□□□□ 0.58
SMARCA4-201ENST00000344626 ARID3AQ99856 593 aa18.67■□□□□ 0.58
SMARCA4-201ENST00000344626 GTPBP4Q9BZE4 634 aaKnown RBP18.67■□□□□ 0.58
SMARCA4-201ENST00000344626 ANGEL1Q9UNK9 670 aaKnown RBP18.67■□□□□ 0.58
SMARCA4-201ENST00000344626 PDE6AP16499 860 aa18.67■□□□□ 0.58
SMARCA4-201ENST00000344626 SPA17Q15506 151 aa18.67■□□□□ 0.58
SMARCA4-201ENST00000344626 FLOT1O75955 427 aa18.66■□□□□ 0.58
SMARCA4-201ENST00000344626 KIAA1328Q86T90 577 aa18.66■□□□□ 0.58
SMARCA4-201ENST00000344626 PIK3C2BO00750 1634 aa18.66■□□□□ 0.58
SMARCA4-201ENST00000344626 SLC27A2O14975 620 aa18.66■□□□□ 0.58
SMARCA4-201ENST00000344626 RPS6KB1P23443 525 aa18.66■□□□□ 0.58
SMARCA4-201ENST00000344626 STX1AQ16623 288 aa18.66■□□□□ 0.58
SMARCA4-201ENST00000344626 FAM47CQ5HY64 1035 aa18.66■□□□□ 0.58
SMARCA4-201ENST00000344626 TCERG1LQ5VWI1 586 aa18.66■□□□□ 0.58
SMARCA4-201ENST00000344626 CHURC1Q8WUH1 139 aa18.66■□□□□ 0.58
SMARCA4-201ENST00000344626 CELF1Q92879 486 aaKnown RBP18.66■□□□□ 0.58
SMARCA4-201ENST00000344626 DSCC1Q9BVC3 393 aa18.66■□□□□ 0.58
SMARCA4-201ENST00000344626 USP26Q9BXU7 913 aa18.66■□□□□ 0.58
SMARCA4-201ENST00000344626 DEXIO95424 95 aa18.66■□□□□ 0.58
SMARCA4-201ENST00000344626 ICA1Q05084 483 aa18.65■□□□□ 0.58
SMARCA4-201ENST00000344626 NCAPG2Q86XI2 1143 aa18.65■□□□□ 0.58
SMARCA4-201ENST00000344626 KDM2BQ8NHM5 1336 aa18.65■□□□□ 0.58
SMARCA4-201ENST00000344626 DLC1Q96QB1 1528 aa18.65■□□□□ 0.58
SMARCA4-201ENST00000344626 GRPEL1Q9HAV7 217 aa18.65■□□□□ 0.58
SMARCA4-201ENST00000344626 ATP10DQ9P241 1426 aa18.65■□□□□ 0.58
SMARCA4-201ENST00000344626 CAVIN2O95810 425 aa18.65■□□□□ 0.58
SMARCA4-201ENST00000344626 DIXDC1Q155Q3 683 aa18.65■□□□□ 0.58
SMARCA4-201ENST00000344626 FILIP1Q7Z7B0 1213 aa18.65■□□□□ 0.58
SMARCA4-201ENST00000344626 BSDC1Q9NW68 430 aaPredicted RBP18.65■□□□□ 0.58
SMARCA4-201ENST00000344626 SGSM2O43147 1006 aa18.65■□□□□ 0.58
SMARCA4-201ENST00000344626 LINC00116Q8NCU8 138 aa18.65■□□□□ 0.58
SMARCA4-201ENST00000344626 SNAP23O00161 211 aa18.64■□□□□ 0.58
SMARCA4-201ENST00000344626 SASH1O94885 1247 aa18.64■□□□□ 0.58
SMARCA4-201ENST00000344626 ALAS1P13196 640 aa18.64■□□□□ 0.58
SMARCA4-201ENST00000344626 TAF4BQ92750 862 aa18.64■□□□□ 0.58
SMARCA4-201ENST00000344626 JAKMIP3Q5VZ66 844 aa18.64■□□□□ 0.57
SMARCA4-201ENST00000344626 SSR1P43307 286 aaKnown RBP18.64■□□□□ 0.57
SMARCA4-201ENST00000344626 IQSEC2Q5JU85 1478 aa18.64■□□□□ 0.57
SMARCA4-201ENST00000344626 ZNF853P0CG23 659 aa18.64■□□□□ 0.57
SMARCA4-201ENST00000344626 ABCB5Q2M3G0 1257 aa18.64■□□□□ 0.57
SMARCA4-201ENST00000344626 ANKRD35Q8N283 1001 aa18.64■□□□□ 0.57
SMARCA4-201ENST00000344626 PRKCSHP14314 528 aaPredicted RBP18.64■□□□□ 0.57
SMARCA4-201ENST00000344626 KRT26Q7Z3Y9 468 aa18.64■□□□□ 0.57
SMARCA4-201ENST00000344626 RC3H1Q5TC82 1133 aaKnown RBP18.63■□□□□ 0.57
SMARCA4-201ENST00000344626 DPP9Q86TI2 863 aa18.63■□□□□ 0.57
SMARCA4-201ENST00000344626 IQCEQ6IPM2 695 aa18.63■□□□□ 0.57
SMARCA4-201ENST00000344626 MRPS27Q92552 414 aaKnown RBP18.63■□□□□ 0.57
SMARCA4-201ENST00000344626 MTFR1LQ9H019 292 aa18.63■□□□□ 0.57
SMARCA4-201ENST00000344626 ECE2O60344 883 aa18.63■□□□□ 0.57
SMARCA4-201ENST00000344626 HSP90B2PQ58FF3 399 aa18.62■□□□□ 0.57
SMARCA4-201ENST00000344626 DTHD1Q6ZMT9 781 aa18.62■□□□□ 0.57
SMARCA4-201ENST00000344626 SPICE1Q8N0Z3 855 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 100.1 ms