RNA–Protein interactions for RNA: ENST00000339998.10

MBD1-203, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 2,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-203ENST00000339998 CCDC69A6NI79 296 aa18.06■□□□□ 0.48
MBD1-203ENST00000339998 UFL1O94874 794 aa18.06■□□□□ 0.48
MBD1-203ENST00000339998 APBA3O96018 575 aa18.06■□□□□ 0.48
MBD1-203ENST00000339998 CSPP1Q1MSJ5 1256 aa18.06■□□□□ 0.48
MBD1-203ENST00000339998 FBXO18Q8NFZ0 1043 aa18.06■□□□□ 0.48
MBD1-203ENST00000339998 NTRK3Q16288 839 aa18.05■□□□□ 0.48
MBD1-203ENST00000339998 CTR9Q6PD62 1173 aa18.05■□□□□ 0.48
MBD1-203ENST00000339998 ERCC4Q92889 916 aaPredicted RBP18.05■□□□□ 0.48
MBD1-203ENST00000339998 CLIC4Q9Y696 253 aa18.05■□□□□ 0.48
MBD1-203ENST00000339998 POLRMTO00411 1230 aaKnown RBP18.05■□□□□ 0.48
MBD1-203ENST00000339998 TMEM87BQ96K49 555 aa18.05■□□□□ 0.48
MBD1-203ENST00000339998 ALG1Q9BT22 464 aa18.05■□□□□ 0.48
MBD1-203ENST00000339998 SLC26A6Q9BXS9 759 aa18.05■□□□□ 0.48
MBD1-203ENST00000339998 FAM47AQ5JRC9 791 aa18.04■□□□□ 0.48
MBD1-203ENST00000339998 COL23A1Q86Y22 540 aaPredicted RBP18.04■□□□□ 0.48
MBD1-203ENST00000339998 DHX16O60231 1041 aaKnown RBP18.04■□□□□ 0.48
MBD1-203ENST00000339998 ADRA2BP18089 450 aa18.04■□□□□ 0.48
MBD1-203ENST00000339998 ST5P78524 1137 aa18.04■□□□□ 0.48
MBD1-203ENST00000339998 WTAPQ15007 396 aa18.04■□□□□ 0.48
MBD1-203ENST00000339998 DZIP1Q86YF9 867 aaKnown RBP18.04■□□□□ 0.48
MBD1-203ENST00000339998 KRT23Q9C075 422 aa18.04■□□□□ 0.48
MBD1-203ENST00000339998 GOLPH3LQ9H4A5 285 aa18.04■□□□□ 0.48
MBD1-203ENST00000339998 ELP1O95163 1332 aa18.04■□□□□ 0.48
MBD1-203ENST00000339998 USP17L8P0C7I0 530 aa18.03■□□□□ 0.48
MBD1-203ENST00000339998 SLC27A3Q5K4L6 730 aa18.03■□□□□ 0.48
MBD1-203ENST00000339998 DCP1AQ9NPI6 582 aaPredicted RBP18.03■□□□□ 0.48
MBD1-203ENST00000339998 POLLQ9UGP5 575 aa18.03■□□□□ 0.48
MBD1-203ENST00000339998 KIF3AQ9Y496 699 aa18.03■□□□□ 0.48
MBD1-203ENST00000339998 WDR19Q8NEZ3 1342 aa18.03■□□□□ 0.48
MBD1-203ENST00000339998 SGMS1Q86VZ5 419 aa18.03■□□□□ 0.48
MBD1-203ENST00000339998 TNKSO95271 1327 aa18.03■□□□□ 0.48
MBD1-203ENST00000339998 XDHP47989 1333 aa18.03■□□□□ 0.48
MBD1-203ENST00000339998 RIMBP2O15034 1052 aa18.03■□□□□ 0.48
MBD1-203ENST00000339998 CRY2Q49AN0 593 aa18.02■□□□□ 0.48
MBD1-203ENST00000339998 CNNM2Q9H8M5 875 aa18.02■□□□□ 0.48
MBD1-203ENST00000339998 IARSP41252 1262 aaKnown RBP18.02■□□□□ 0.47
MBD1-203ENST00000339998 ME1P48163 572 aa18.02■□□□□ 0.47
MBD1-203ENST00000339998 PLCB2Q00722 1185 aa18.02■□□□□ 0.47
MBD1-203ENST00000339998 NUP62CLQ9H1M0 184 aa18.02■□□□□ 0.47
MBD1-203ENST00000339998 CFAP45Q9UL16 551 aa18.02■□□□□ 0.47
MBD1-203ENST00000339998 KCNJ14Q9UNX9 436 aa18.02■□□□□ 0.47
MBD1-203ENST00000339998 PDIA4P13667 645 aaKnown RBP18.01■□□□□ 0.47
MBD1-203ENST00000339998 KRT40Q6A162 431 aa18.01■□□□□ 0.47
MBD1-203ENST00000339998 TRIM44Q96DX7 344 aaPredicted RBP18.01■□□□□ 0.47
MBD1-203ENST00000339998 UBAC1Q9BSL1 405 aa18.01■□□□□ 0.47
MBD1-203ENST00000339998 FUCA2Q9BTY2 467 aa18.01■□□□□ 0.47
MBD1-203ENST00000339998 C6orf229H3BNL8 230 aa18.01■□□□□ 0.47
MBD1-203ENST00000339998 LIFRP42702 1097 aa18.01■□□□□ 0.47
MBD1-203ENST00000339998 ENAHQ8N8S7 591 aaPredicted RBP18.01■□□□□ 0.47
MBD1-203ENST00000339998 SH3RF3Q8TEJ3 882 aaPredicted RBP18.01■□□□□ 0.47
MBD1-203ENST00000339998 ANP32BQ92688 251 aaKnown RBP18.01■□□□□ 0.47
MBD1-203ENST00000339998 DYNLL2Q96FJ2 89 aa18.01■□□□□ 0.47
MBD1-203ENST00000339998 KIF23Q02241 960 aaPredicted RBP18■□□□□ 0.47
MBD1-203ENST00000339998 TDRD7Q8NHU6 1098 aaKnown RBP18■□□□□ 0.47
MBD1-203ENST00000339998 MCM9Q9NXL9 1143 aa18■□□□□ 0.47
MBD1-203ENST00000339998 USP25Q9UHP3 1055 aa18■□□□□ 0.47
MBD1-203ENST00000339998 SEMA3EO15041 775 aa18■□□□□ 0.47
MBD1-203ENST00000339998 LDHBP07195 334 aaKnown RBP18■□□□□ 0.47
MBD1-203ENST00000339998 CCAR1Q8IX12 1150 aaKnown RBP18■□□□□ 0.47
MBD1-203ENST00000339998 ZNF654Q8IZM8 581 aa18■□□□□ 0.47
MBD1-203ENST00000339998 PIBF1Q8WXW3 757 aa18■□□□□ 0.47
MBD1-203ENST00000339998 CD209Q9NNX6 404 aa18■□□□□ 0.47
MBD1-203ENST00000339998 RCOR1Q9UKL0 485 aa18■□□□□ 0.47
MBD1-203ENST00000339998 ERICH2A1L162 156 aa18■□□□□ 0.47
MBD1-203ENST00000339998 MARCKSP29966 332 aaPredicted RBP18■□□□□ 0.47
MBD1-203ENST00000339998 CCDC173Q0VFZ6 552 aa18■□□□□ 0.47
MBD1-203ENST00000339998 TNMDQ9H2S6 317 aa18■□□□□ 0.47
MBD1-203ENST00000339998 LEMD3Q9Y2U8 911 aa18■□□□□ 0.47
MBD1-203ENST00000339998 SRCAPQ6ZRS2 3230 aa17.99■□□□□ 0.47
MBD1-203ENST00000339998 MYSM1Q5VVJ2 828 aa17.99■□□□□ 0.47
MBD1-203ENST00000339998 SLC44A5Q8NCS7 719 aa17.99■□□□□ 0.47
MBD1-203ENST00000339998 FBXW7Q969H0 707 aa17.99■□□□□ 0.47
MBD1-203ENST00000339998 PPP1R9BQ96SB3 815 aa17.99■□□□□ 0.47
MBD1-203ENST00000339998 MXD3Q9BW11 206 aa17.99■□□□□ 0.47
MBD1-203ENST00000339998 SAP30BPQ9UHR5 308 aaKnown RBP17.99■□□□□ 0.47
MBD1-203ENST00000339998 PCDHA7Q9UN72 937 aa17.99■□□□□ 0.47
MBD1-203ENST00000339998 A0A1B0GVL5 298 aa17.99■□□□□ 0.47
MBD1-203ENST00000339998 RBM6P78332 1123 aaKnown RBP17.99■□□□□ 0.47
MBD1-203ENST00000339998 SEC23AQ15436 765 aa17.99■□□□□ 0.47
MBD1-203ENST00000339998 RTN1Q16799 776 aa17.99■□□□□ 0.47
MBD1-203ENST00000339998 ESR2Q92731 530 aa17.99■□□□□ 0.47
MBD1-203ENST00000339998 RNF41Q9H4P4 317 aaPredicted RBP17.99■□□□□ 0.47
MBD1-203ENST00000339998 SART3Q15020 963 aaKnown RBP17.98■□□□□ 0.47
MBD1-203ENST00000339998 SYNE3Q6ZMZ3 975 aa17.98■□□□□ 0.47
MBD1-203ENST00000339998 RBM17Q96I25 401 aaKnown RBP17.98■□□□□ 0.47
MBD1-203ENST00000339998 BRIP1Q9BX63 1249 aa17.98■□□□□ 0.47
MBD1-203ENST00000339998 CRNKL1Q9BZJ0 848 aaKnown RBP17.98■□□□□ 0.47
MBD1-203ENST00000339998 ZNF219Q9P2Y4 722 aaPredicted RBP17.98■□□□□ 0.47
MBD1-203ENST00000339998 GGA1Q9UJY5 639 aa17.98■□□□□ 0.47
MBD1-203ENST00000339998 MTMR7Q9Y216 660 aa17.98■□□□□ 0.47
MBD1-203ENST00000339998 F8W031 263 aaPredicted RBP17.98■□□□□ 0.47
MBD1-203ENST00000339998 TBC1D16Q8TBP0 767 aa17.98■□□□□ 0.47
MBD1-203ENST00000339998 TGFBRAP1Q8WUH2 860 aa17.98■□□□□ 0.47
MBD1-203ENST00000339998 AP5Z1O43299 807 aa17.97■□□□□ 0.47
MBD1-203ENST00000339998 MAP3K11Q16584 847 aa17.97■□□□□ 0.47
MBD1-203ENST00000339998 MAPKAPK5Q8IW41 473 aa17.97■□□□□ 0.47
MBD1-203ENST00000339998 ZSCAN10Q96SZ4 725 aaPredicted RBP17.97■□□□□ 0.47
MBD1-203ENST00000339998 MYH15Q9Y2K3 1946 aa17.97■□□□□ 0.47
MBD1-203ENST00000339998 PLEKHA8P1O95397 391 aa17.97■□□□□ 0.47
MBD1-203ENST00000339998 MMP10P09238 476 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms