RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 AK9Q5TCS8 1911 aa33.68■■■□□ 2.98
ATPAF1-201ENST00000329231 SPDYE5A6NIY4 337 aa33.67■■■□□ 2.98
ATPAF1-201ENST00000329231 IDH1O75874 414 aaKnown RBP33.67■■■□□ 2.98
ATPAF1-201ENST00000329231 ERO1BQ86YB8 467 aa33.67■■■□□ 2.98
ATPAF1-201ENST00000329231 IFNL1Q8IU54 200 aa33.67■■■□□ 2.98
ATPAF1-201ENST00000329231 LRRCC1Q9C099 1032 aa33.67■■■□□ 2.98
ATPAF1-201ENST00000329231 ZNF112Q9UJU3 913 aa33.67■■■□□ 2.98
ATPAF1-201ENST00000329231 MAST2Q6P0Q8 1798 aa33.66■■■□□ 2.98
ATPAF1-201ENST00000329231 TEX11Q8IYF3 940 aa33.66■■■□□ 2.98
ATPAF1-201ENST00000329231 PPIL4Q8WUA2 492 aaKnown RBP eCLIP33.66■■■□□ 2.98
ATPAF1-201ENST00000329231 CNKSR2Q8WXI2 1034 aa33.66■■■□□ 2.98
ATPAF1-201ENST00000329231 OTUD5Q96G74 571 aa33.66■■■□□ 2.98
ATPAF1-201ENST00000329231 AATFQ9NY61 560 aaKnown RBP eCLIP33.66■■■□□ 2.98
ATPAF1-201ENST00000329231 NDUFB9Q9Y6M9 179 aa33.66■■■□□ 2.98
ATPAF1-201ENST00000329231 DDTLA6NHG4 134 aaPredicted RBP33.65■■■□□ 2.98
ATPAF1-201ENST00000329231 TBC1D8O95759 1140 aa33.65■■■□□ 2.98
ATPAF1-201ENST00000329231 PPP4CP60510 307 aa33.65■■■□□ 2.98
ATPAF1-201ENST00000329231 OTUD7BQ6GQQ9 843 aa33.65■■■□□ 2.98
ATPAF1-201ENST00000329231 SH3BP5LQ7L8J4 393 aa33.65■■■□□ 2.98
ATPAF1-201ENST00000329231 CASP8AP2Q9UKL3 1982 aa33.64■■■□□ 2.98
ATPAF1-201ENST00000329231 TESPA1A2RU30 521 aaPredicted RBP33.64■■■□□ 2.98
ATPAF1-201ENST00000329231 INPP5BP32019 993 aa33.64■■■□□ 2.98
ATPAF1-201ENST00000329231 GTF2A2P52657 109 aa33.64■■■□□ 2.98
ATPAF1-201ENST00000329231 MAP3K12Q12852 859 aa33.64■■■□□ 2.98
ATPAF1-201ENST00000329231 TTF1Q15361 905 aaPredicted RBP33.64■■■□□ 2.98
ATPAF1-201ENST00000329231 TMED8Q6PL24 325 aaPredicted RBP33.64■■■□□ 2.98
ATPAF1-201ENST00000329231 SH3RF3Q8TEJ3 882 aaPredicted RBP33.64■■■□□ 2.98
ATPAF1-201ENST00000329231 CFHR5Q9BXR6 569 aa33.64■■■□□ 2.98
ATPAF1-201ENST00000329231 ANTXR1Q9H6X2 564 aa33.64■■■□□ 2.98
ATPAF1-201ENST00000329231 ATRNL1Q5VV63 1379 aa33.63■■■□□ 2.97
ATPAF1-201ENST00000329231 CYP7A1P22680 504 aa33.63■■■□□ 2.97
ATPAF1-201ENST00000329231 ADGRA1Q86SQ6 560 aa33.63■■■□□ 2.97
ATPAF1-201ENST00000329231 MS4A4AQ96JQ5 239 aa33.63■■■□□ 2.97
ATPAF1-201ENST00000329231 DCTPP1Q9H773 170 aa33.63■■■□□ 2.97
ATPAF1-201ENST00000329231 IGF2BP3O00425 579 aaKnown RBP eCLIP33.62■■■□□ 2.97
ATPAF1-201ENST00000329231 LAMB1P07942 1786 aa33.62■■■□□ 2.97
ATPAF1-201ENST00000329231 MAP3K10Q02779 954 aa33.61■■■□□ 2.97
ATPAF1-201ENST00000329231 NOM1Q5C9Z4 860 aaKnown RBP33.61■■■□□ 2.97
ATPAF1-201ENST00000329231 NOL9Q5SY16 702 aaKnown RBP33.61■■■□□ 2.97
ATPAF1-201ENST00000329231 MAGEB6Q8N7X4 407 aa33.61■■■□□ 2.97
ATPAF1-201ENST00000329231 OSBPL5Q9H0X9 879 aaPredicted RBP33.61■■■□□ 2.97
ATPAF1-201ENST00000329231 PPATQ06203 517 aa33.6■■■□□ 2.97
ATPAF1-201ENST00000329231 PPIL2Q13356 520 aa33.6■■■□□ 2.97
ATPAF1-201ENST00000329231 CERS3Q8IU89 383 aa33.6■■■□□ 2.97
ATPAF1-201ENST00000329231 COL2A1P02458 1487 aaPredicted RBP33.59■■■□□ 2.97
ATPAF1-201ENST00000329231 DOCK2Q92608 1830 aa33.59■■■□□ 2.97
ATPAF1-201ENST00000329231 DNAJC2Q99543 621 aaKnown RBP33.59■■■□□ 2.97
ATPAF1-201ENST00000329231 PCDHB15Q9Y5E8 787 aa33.59■■■□□ 2.97
ATPAF1-201ENST00000329231 CCL15-CCL14A0A0B4J2E2 113 aa33.58■■■□□ 2.97
ATPAF1-201ENST00000329231 PHF20L1A8MW92 1017 aa33.58■■■□□ 2.97
ATPAF1-201ENST00000329231 CCL15Q16663 113 aa33.58■■■□□ 2.97
ATPAF1-201ENST00000329231 CRBNQ96SW2 442 aa33.58■■■□□ 2.97
ATPAF1-201ENST00000329231 PTPN18Q99952 460 aa33.58■■■□□ 2.97
ATPAF1-201ENST00000329231 MYO5AQ9Y4I1 1855 aaKnown RBP33.58■■■□□ 2.97
ATPAF1-201ENST00000329231 GPR25O00155 361 aa33.57■■■□□ 2.96
ATPAF1-201ENST00000329231 IRF6O14896 467 aa33.57■■■□□ 2.96
ATPAF1-201ENST00000329231 SMARCA5O60264 1052 aaPredicted RBP33.57■■■□□ 2.96
ATPAF1-201ENST00000329231 TBC1D12O60347 775 aa33.57■■■□□ 2.96
ATPAF1-201ENST00000329231 ATP5JP18859 108 aa33.57■■■□□ 2.96
ATPAF1-201ENST00000329231 SNAPC2Q13487 334 aa33.57■■■□□ 2.96
ATPAF1-201ENST00000329231 TGFBRAP1Q8WUH2 860 aa33.57■■■□□ 2.96
ATPAF1-201ENST00000329231 BRI3BPQ8WY22 251 aa33.57■■■□□ 2.96
ATPAF1-201ENST00000329231 GOLIM4O00461 696 aa33.56■■■□□ 2.96
ATPAF1-201ENST00000329231 CETPP11597 493 aa33.56■■■□□ 2.96
ATPAF1-201ENST00000329231 DHX36Q9H2U1 1008 aaKnown RBP33.56■■■□□ 2.96
ATPAF1-201ENST00000329231 DGKZQ13574 1117 aa33.55■■■□□ 2.96
ATPAF1-201ENST00000329231 ZNF296Q8WUU4 475 aaPredicted RBP33.55■■■□□ 2.96
ATPAF1-201ENST00000329231 R3HDMLQ9H3Y0 253 aa33.55■■■□□ 2.96
ATPAF1-201ENST00000329231 DYNLL1P63167 89 aaKnown RBP33.54■■■□□ 2.96
ATPAF1-201ENST00000329231 SCYL3Q8IZE3 742 aa33.54■■■□□ 2.96
ATPAF1-201ENST00000329231 MIGA1Q8NAN2 632 aa33.54■■■□□ 2.96
ATPAF1-201ENST00000329231 BOLA2Q9H3K6 86 aa33.54■■■□□ 2.96
ATPAF1-201ENST00000329231 XPO5Q9HAV4 1204 aaKnown RBP eCLIP33.54■■■□□ 2.96
ATPAF1-201ENST00000329231 PICK1Q9NRD5 415 aa33.54■■■□□ 2.96
ATPAF1-201ENST00000329231 CTNND1O60716 968 aaKnown RBP33.53■■■□□ 2.96
ATPAF1-201ENST00000329231 CAPN15O75808 1086 aa33.53■■■□□ 2.96
ATPAF1-201ENST00000329231 MAPKAPK5Q8IW41 473 aa33.53■■■□□ 2.96
ATPAF1-201ENST00000329231 MCOLN1Q9GZU1 580 aa33.53■■■□□ 2.96
ATPAF1-201ENST00000329231 PAG1Q9NWQ8 432 aa33.53■■■□□ 2.96
ATPAF1-201ENST00000329231 FLT1P17948 1338 aa33.53■■■□□ 2.96
ATPAF1-201ENST00000329231 SLC9C2Q5TAH2 1124 aa33.52■■■□□ 2.96
ATPAF1-201ENST00000329231 ABHD8Q96I13 439 aa33.52■■■□□ 2.96
ATPAF1-201ENST00000329231 HAUS7Q99871 368 aa33.52■■■□□ 2.96
ATPAF1-201ENST00000329231 PI4KBQ9UBF8 816 aa33.52■■■□□ 2.96
ATPAF1-201ENST00000329231 FKTNO75072 461 aa33.51■■■□□ 2.95
ATPAF1-201ENST00000329231 SLURP2P0DP57 97 aa33.51■■■□□ 2.95
ATPAF1-201ENST00000329231 HERC5Q9UII4 1024 aaKnown RBP33.51■■■□□ 2.95
ATPAF1-201ENST00000329231 KCNH4Q9UQ05 1017 aa33.51■■■□□ 2.95
ATPAF1-201ENST00000329231 PDE6AP16499 860 aa33.5■■■□□ 2.95
ATPAF1-201ENST00000329231 CRHR2Q13324 411 aa33.5■■■□□ 2.95
ATPAF1-201ENST00000329231 CTU1Q7Z7A3 348 aaKnown RBP33.5■■■□□ 2.95
ATPAF1-201ENST00000329231 EDC3Q96F86 508 aaKnown RBP33.49■■■□□ 2.95
ATPAF1-201ENST00000329231 GPATCH3Q96I76 525 aa33.49■■■□□ 2.95
ATPAF1-201ENST00000329231 ZCCHC17Q9NP64 241 aaKnown RBP33.49■■■□□ 2.95
ATPAF1-201ENST00000329231 ECHDC1Q9NTX5 307 aa33.49■■■□□ 2.95
ATPAF1-201ENST00000329231 PTPRAP18433 802 aa33.48■■■□□ 2.95
ATPAF1-201ENST00000329231 USP5P45974 858 aa33.48■■■□□ 2.95
ATPAF1-201ENST00000329231 FAM43AQ8N2R8 423 aa33.48■■■□□ 2.95
ATPAF1-201ENST00000329231 FAM196BA6NMK8 535 aa33.47■■■□□ 2.95
ATPAF1-201ENST00000329231 AAMPQ13685 434 aa33.47■■■□□ 2.95
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms