RNA–Protein interactions for RNA: ENST00000319980.10

IFT88-201, Transcript of intraflagellar transport 88, humanhuman

TSL 1 (best) BASIC

Gene IFT88, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-201ENST00000319980 GOLGA8AA7E2F4 631 aa8.83□□□□□ -1
IFT88-201ENST00000319980 SART3Q15020 963 aaKnown RBP8.83□□□□□ -1
IFT88-201ENST00000319980 DDX19AQ9NUU7 478 aaKnown RBP8.83□□□□□ -1
IFT88-201ENST00000319980 MYH7P12883 1935 aa8.83□□□□□ -1
IFT88-201ENST00000319980 BTAF1O14981 1849 aa8.82□□□□□ -1
IFT88-201ENST00000319980 ERICH2A1L162 156 aa8.82□□□□□ -1
IFT88-201ENST00000319980 SEMA3EO15041 775 aa8.82□□□□□ -1
IFT88-201ENST00000319980 CDKL5O76039 1030 aa8.82□□□□□ -1
IFT88-201ENST00000319980 CCDC192P0DO97 292 aa8.82□□□□□ -1
IFT88-201ENST00000319980 PRDX5P30044 214 aa8.82□□□□□ -1
IFT88-201ENST00000319980 ME1P48163 572 aa8.82□□□□□ -1
IFT88-201ENST00000319980 MECOMQ03112 1051 aa8.82□□□□□ -1
IFT88-201ENST00000319980 ATL3Q6DD88 541 aa8.82□□□□□ -1
IFT88-201ENST00000319980 SYNE3Q6ZMZ3 975 aa8.82□□□□□ -1
IFT88-201ENST00000319980 ALG1Q9BT22 464 aa8.82□□□□□ -1
IFT88-201ENST00000319980 RNF41Q9H4P4 317 aaPredicted RBP8.82□□□□□ -1
IFT88-201ENST00000319980 USP25Q9UHP3 1055 aa8.82□□□□□ -1
IFT88-201ENST00000319980 TAF1P21675 1872 aa8.82□□□□□ -1
IFT88-201ENST00000319980 LY75O60449 1722 aa8.82□□□□□ -1
IFT88-201ENST00000319980 CYP2D7A0A087X1C5 515 aa8.82□□□□□ -1
IFT88-201ENST00000319980 IARSP41252 1262 aaKnown RBP8.82□□□□□ -1
IFT88-201ENST00000319980 NSUN4Q96CB9 384 aaKnown RBP8.82□□□□□ -1
IFT88-201ENST00000319980 FAM217BQ9NTX9 383 aaPredicted RBP8.82□□□□□ -1
IFT88-201ENST00000319980 ARAP2Q8WZ64 1704 aa8.82□□□□□ -1
IFT88-201ENST00000319980 WTAPQ15007 396 aa8.82□□□□□ -1
IFT88-201ENST00000319980 NTRK3Q16288 839 aa8.82□□□□□ -1
IFT88-201ENST00000319980 CCAR1Q8IX12 1150 aaKnown RBP8.82□□□□□ -1
IFT88-201ENST00000319980 CCDC82Q8N4S0 544 aa8.82□□□□□ -1
IFT88-201ENST00000319980 CAMKK2Q96RR4 588 aa8.82□□□□□ -1
IFT88-201ENST00000319980 ARID3AQ99856 593 aa8.82□□□□□ -1
IFT88-201ENST00000319980 UBAC1Q9BSL1 405 aa8.82□□□□□ -1
IFT88-201ENST00000319980 AATFQ9NY61 560 aaKnown RBP eCLIP8.82□□□□□ -1
IFT88-201ENST00000319980 ATF5Q9Y2D1 282 aaPredicted RBP8.82□□□□□ -1
IFT88-201ENST00000319980 KIF28PB7ZC32 967 aa8.81□□□□□ -1
IFT88-201ENST00000319980 UBE2Q2LH0YL09 131 aa8.81□□□□□ -1
IFT88-201ENST00000319980 TRIM37O94972 964 aa8.81□□□□□ -1
IFT88-201ENST00000319980 GRAPQ13588 217 aa8.81□□□□□ -1
IFT88-201ENST00000319980 UVSSAQ2YD98 709 aa8.81□□□□□ -1
IFT88-201ENST00000319980 PRR5LQ6MZQ0 368 aa8.81□□□□□ -1
IFT88-201ENST00000319980 GRAPLQ8TC17 118 aaPredicted RBP8.81□□□□□ -1
IFT88-201ENST00000319980 CLSTN2Q9H4D0 955 aa8.81□□□□□ -1
IFT88-201ENST00000319980 LAMB2P55268 1798 aa8.81□□□□□ -1
IFT88-201ENST00000319980 RANBP6O60518 1105 aaKnown RBP8.81□□□□□ -1
IFT88-201ENST00000319980 PRDM1O75626 825 aa8.81□□□□□ -1
IFT88-201ENST00000319980 GYS1P13807 737 aa8.81□□□□□ -1
IFT88-201ENST00000319980 CLCN1P35523 988 aa8.81□□□□□ -1
IFT88-201ENST00000319980 BAG6P46379 1132 aa8.81□□□□□ -1
IFT88-201ENST00000319980 KIF23Q02241 960 aaPredicted RBP8.81□□□□□ -1
IFT88-201ENST00000319980 TYRO3Q06418 890 aa8.81□□□□□ -1
IFT88-201ENST00000319980 SF3A1Q15459 793 aaKnown RBP8.81□□□□□ -1
IFT88-201ENST00000319980 MYSM1Q5VVJ2 828 aa8.81□□□□□ -1
IFT88-201ENST00000319980 ZSCAN30Q86W11 494 aa8.81□□□□□ -1
IFT88-201ENST00000319980 NUP133Q8WUM0 1156 aa8.81□□□□□ -1
IFT88-201ENST00000319980 ESR2Q92731 530 aa8.81□□□□□ -1
IFT88-201ENST00000319980 SLC26A6Q9BXS9 759 aa8.81□□□□□ -1
IFT88-201ENST00000319980 RTEL1Q9NZ71 1219 aa8.81□□□□□ -1
IFT88-201ENST00000319980 CLIC4Q9Y696 253 aa8.81□□□□□ -1
IFT88-201ENST00000319980 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.8□□□□□ -1
IFT88-201ENST00000319980 USP17L12C9JPN9 530 aa8.8□□□□□ -1
IFT88-201ENST00000319980 USP17L21D6R901 530 aa8.8□□□□□ -1
IFT88-201ENST00000319980 GNL2Q13823 731 aaKnown RBP8.8□□□□□ -1
IFT88-201ENST00000319980 KRT40Q6A162 431 aa8.8□□□□□ -1
IFT88-201ENST00000319980 BRAPQ7Z569 592 aa8.8□□□□□ -1
IFT88-201ENST00000319980 CMTR1Q8N1G2 835 aaKnown RBP8.8□□□□□ -1
IFT88-201ENST00000319980 TMTC2Q8N394 836 aa8.8□□□□□ -1
IFT88-201ENST00000319980 LINC00301Q8NCQ3 95 aa8.8□□□□□ -1
IFT88-201ENST00000319980 RPGRQ92834 1020 aaKnown RBP8.8□□□□□ -1
IFT88-201ENST00000319980 SCN7AQ01118 1682 aa8.8□□□□□ -1
IFT88-201ENST00000319980 MSNP26038 577 aaKnown RBP8.8□□□□□ -1
IFT88-201ENST00000319980 SSRP1Q08945 709 aaKnown RBP8.8□□□□□ -1
IFT88-201ENST00000319980 STK38Q15208 465 aa8.8□□□□□ -1
IFT88-201ENST00000319980 CCDC73Q6ZRK6 1079 aa8.8□□□□□ -1
IFT88-201ENST00000319980 GPR101Q96P66 508 aaPredicted RBP8.8□□□□□ -1
IFT88-201ENST00000319980 BRIP1Q9BX63 1249 aa8.8□□□□□ -1
IFT88-201ENST00000319980 GOLPH3LQ9H4A5 285 aa8.8□□□□□ -1
IFT88-201ENST00000319980 ANAPC4Q9UJX5 808 aa8.8□□□□□ -1
IFT88-201ENST00000319980 PCDHA7Q9UN72 937 aa8.8□□□□□ -1
IFT88-201ENST00000319980 ADCY5O95622 1261 aa8.79□□□□□ -1
IFT88-201ENST00000319980 SERPINB2P05120 415 aa8.79□□□□□ -1
IFT88-201ENST00000319980 PTMAP06454 111 aaKnown RBP8.79□□□□□ -1
IFT88-201ENST00000319980 TRIM29Q14134 588 aa8.79□□□□□ -1
IFT88-201ENST00000319980 RTN1Q16799 776 aa8.79□□□□□ -1
IFT88-201ENST00000319980 HS1BP3Q53T59 392 aa8.79□□□□□ -1
IFT88-201ENST00000319980 CTR9Q6PD62 1173 aa8.79□□□□□ -1
IFT88-201ENST00000319980 SASS6Q6UVJ0 657 aa8.79□□□□□ -1
IFT88-201ENST00000319980 MRVI1Q9Y6F6 885 aa8.79□□□□□ -1
IFT88-201ENST00000319980 TNKSO95271 1327 aa8.79□□□□□ -1
IFT88-201ENST00000319980 PLSCR1O15162 318 aa8.79□□□□□ -1
IFT88-201ENST00000319980 EVX2Q03828 476 aa8.79□□□□□ -1
IFT88-201ENST00000319980 SNW1Q13573 536 aaKnown RBP8.79□□□□□ -1
IFT88-201ENST00000319980 DZIP1Q86YF9 867 aaKnown RBP8.79□□□□□ -1
IFT88-201ENST00000319980 MPNDQ8N594 471 aa8.79□□□□□ -1
IFT88-201ENST00000319980 FSIP1Q8NA03 581 aa8.79□□□□□ -1
IFT88-201ENST00000319980 CRNKL1Q9BZJ0 848 aaKnown RBP8.79□□□□□ -1
IFT88-201ENST00000319980 POLR3EQ9NVU0 708 aa8.79□□□□□ -1
IFT88-201ENST00000319980 LEMD3Q9Y2U8 911 aa8.79□□□□□ -1
IFT88-201ENST00000319980 SPTLC2O15270 562 aa8.79□□□□□ -1
IFT88-201ENST00000319980 KINO60870 393 aaKnown RBP8.79□□□□□ -1
IFT88-201ENST00000319980 IFNAR1P17181 557 aa8.79□□□□□ -1
IFT88-201ENST00000319980 GUCY1A2P33402 732 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 206.1 ms