RNA–Protein interactions for RNA: ENST00000317610.11

RTN4-201, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,333 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-201ENST00000317610 IARSP41252 1262 aaKnown RBP21.95■■□□□ 1.1
RTN4-201ENST00000317610 IFIT5Q13325 482 aaKnown RBP21.95■■□□□ 1.1
RTN4-201ENST00000317610 MNS1Q8NEH6 495 aa21.95■■□□□ 1.1
RTN4-201ENST00000317610 DDX17Q92841 729 aaKnown RBP21.95■■□□□ 1.1
RTN4-201ENST00000317610 SENP2Q9HC62 589 aa21.95■■□□□ 1.1
RTN4-201ENST00000317610 RIPOR2Q9Y4F9 1068 aa21.95■■□□□ 1.1
RTN4-201ENST00000317610 UBN2Q6ZU65 1347 aa21.95■■□□□ 1.1
RTN4-201ENST00000317610 PDE4BQ07343 736 aa21.95■■□□□ 1.1
RTN4-201ENST00000317610 TTF1Q15361 905 aaPredicted RBP21.95■■□□□ 1.1
RTN4-201ENST00000317610 TAF7LQ5H9L4 462 aa21.95■■□□□ 1.1
RTN4-201ENST00000317610 ZCRB1Q8TBF4 217 aaKnown RBP21.95■■□□□ 1.1
RTN4-201ENST00000317610 LY9Q9HBG7 655 aa21.95■■□□□ 1.1
RTN4-201ENST00000317610 MYO5AQ9Y4I1 1855 aaKnown RBP21.95■■□□□ 1.1
RTN4-201ENST00000317610 ATP8B1O43520 1251 aa21.94■■□□□ 1.1
RTN4-201ENST00000317610 URI1O94763 535 aaPredicted RBP21.94■■□□□ 1.1
RTN4-201ENST00000317610 RXRAP19793 462 aa21.94■■□□□ 1.1
RTN4-201ENST00000317610 TRIM29Q14134 588 aa21.94■■□□□ 1.1
RTN4-201ENST00000317610 NT5DC1Q5TFE4 455 aa21.94■■□□□ 1.1
RTN4-201ENST00000317610 TMCO3Q6UWJ1 677 aa21.94■■□□□ 1.1
RTN4-201ENST00000317610 KRI1Q8N9T8 703 aaKnown RBP21.94■■□□□ 1.1
RTN4-201ENST00000317610 NOL10Q9BSC4 688 aaKnown RBP21.94■■□□□ 1.1
RTN4-201ENST00000317610 NID2Q14112 1375 aa21.94■■□□□ 1.1
RTN4-201ENST00000317610 SLC9C2Q5TAH2 1124 aa21.94■■□□□ 1.1
RTN4-201ENST00000317610 MICU3Q86XE3 530 aa21.94■■□□□ 1.1
RTN4-201ENST00000317610 ZNF18P17022 549 aa21.93■■□□□ 1.1
RTN4-201ENST00000317610 GOLGA8FQ08AF8 430 aa21.93■■□□□ 1.1
RTN4-201ENST00000317610 GOLGA8DPQ0D2H9 430 aa21.93■■□□□ 1.1
RTN4-201ENST00000317610 ZBTB38Q8NAP3 1195 aaPredicted RBP21.93■■□□□ 1.1
RTN4-201ENST00000317610 CARD6Q9BX69 1037 aa21.93■■□□□ 1.1
RTN4-201ENST00000317610 GOLGA8AA7E2F4 631 aa21.92■■□□□ 1.1
RTN4-201ENST00000317610 B4E1Z4 1266 aa21.92■■□□□ 1.1
RTN4-201ENST00000317610 STX10O60499 249 aa21.92■■□□□ 1.1
RTN4-201ENST00000317610 LIFRP42702 1097 aa21.92■■□□□ 1.1
RTN4-201ENST00000317610 ALX1Q15699 326 aa21.92■■□□□ 1.1
RTN4-201ENST00000317610 BAG1Q99933 345 aaPredicted RBP21.92■■□□□ 1.1
RTN4-201ENST00000317610 PIH1D3Q9NQM4 214 aaKnown RBP21.92■■□□□ 1.1
RTN4-201ENST00000317610 HOOK1Q9UJC3 728 aaKnown RBP21.92■■□□□ 1.1
RTN4-201ENST00000317610 MAN1B1Q9UKM7 699 aa21.92■■□□□ 1.1
RTN4-201ENST00000317610 DCCP43146 1447 aa21.92■■□□□ 1.1
RTN4-201ENST00000317610 MAP3K9P80192 1104 aa21.92■■□□□ 1.1
RTN4-201ENST00000317610 METTL24Q5JXM2 366 aa21.92■■□□□ 1.1
RTN4-201ENST00000317610 STK11IPQ8N1F8 1099 aa21.92■■□□□ 1.1
RTN4-201ENST00000317610 FAM89AQ96GI7 184 aa21.92■■□□□ 1.1
RTN4-201ENST00000317610 CHD4Q14839 1912 aa21.92■■□□□ 1.1
RTN4-201ENST00000317610 SHANK3Q9BYB0 1731 aa21.92■■□□□ 1.1
RTN4-201ENST00000317610 CDHR2Q9BYE9 1310 aa21.92■■□□□ 1.1
RTN4-201ENST00000317610 FMNL1O95466 1100 aaPredicted RBP21.91■■□□□ 1.1
RTN4-201ENST00000317610 SARSP49591 514 aaKnown RBP21.91■■□□□ 1.1
RTN4-201ENST00000317610 ENOX1Q8TC92 643 aaKnown RBP21.91■■□□□ 1.1
RTN4-201ENST00000317610 UBXN6Q9BZV1 441 aa21.91■■□□□ 1.1
RTN4-201ENST00000317610 CYP2C19P33261 490 aa21.91■■□□□ 1.1
RTN4-201ENST00000317610 TIAM2Q8IVF5 1701 aa21.91■■□□□ 1.1
RTN4-201ENST00000317610 NOSTRINQ8IVI9 506 aa21.91■■□□□ 1.1
RTN4-201ENST00000317610 VGLL2Q8N8G2 317 aa21.91■■□□□ 1.1
RTN4-201ENST00000317610 TC2NQ8N9U0 490 aa21.91■■□□□ 1.1
RTN4-201ENST00000317610 MLKLQ8NB16 471 aa21.91■■□□□ 1.1
RTN4-201ENST00000317610 CCDC85AQ96PX6 553 aaPredicted RBP21.91■■□□□ 1.1
RTN4-201ENST00000317610 TCRBV5S4A2TA0A5A2 114 aa21.9■■□□□ 1.1
RTN4-201ENST00000317610 FOXN1O15353 648 aa21.9■■□□□ 1.1
RTN4-201ENST00000317610 ZNF532Q9HCE3 1301 aa21.9■■□□□ 1.1
RTN4-201ENST00000317610 ATF3P18847 181 aa21.9■■□□□ 1.1
RTN4-201ENST00000317610 PTPREP23469 700 aa21.9■■□□□ 1.1
RTN4-201ENST00000317610 SSRP1Q08945 709 aaKnown RBP21.9■■□□□ 1.1
RTN4-201ENST00000317610 POSTNQ15063 836 aa21.9■■□□□ 1.1
RTN4-201ENST00000317610 TMEM67Q5HYA8 995 aa21.9■■□□□ 1.1
RTN4-201ENST00000317610 SPECC1LQ69YQ0 1117 aa21.9■■□□□ 1.1
RTN4-201ENST00000317610 WASF1Q92558 559 aa21.9■■□□□ 1.1
RTN4-201ENST00000317610 DACH1Q9UI36 760 aa21.9■■□□□ 1.1
RTN4-201ENST00000317610 FBXO2Q9UK22 296 aaPredicted RBP21.9■■□□□ 1.1
RTN4-201ENST00000317610 PDE6AP16499 860 aa21.89■■□□□ 1.1
RTN4-201ENST00000317610 IFNAR1P17181 557 aa21.89■■□□□ 1.1
RTN4-201ENST00000317610 CASQ1P31415 396 aa21.89■■□□□ 1.1
RTN4-201ENST00000317610 TOB1P50616 345 aaPredicted RBP21.89■■□□□ 1.1
RTN4-201ENST00000317610 MORC3Q14149 939 aa21.89■■□□□ 1.1
RTN4-201ENST00000317610 NFXL1Q6ZNB6 911 aa21.89■■□□□ 1.1
RTN4-201ENST00000317610 TRIML1Q8N9V2 468 aa21.89■■□□□ 1.1
RTN4-201ENST00000317610 STRBPQ96SI9 672 aaKnown RBP21.89■■□□□ 1.1
RTN4-201ENST00000317610 MRFAP1Q9Y605 127 aa21.89■■□□□ 1.1
RTN4-201ENST00000317610 SPATA31A3Q5VYP0 1347 aa21.89■■□□□ 1.09
RTN4-201ENST00000317610 WDR17Q8IZU2 1322 aa21.89■■□□□ 1.09
RTN4-201ENST00000317610 APPP05067 770 aa21.89■■□□□ 1.09
RTN4-201ENST00000317610 FMR1Q06787 632 aaKnown RBP eCLIP21.89■■□□□ 1.095e-11■□□□□ 8.4
RTN4-201ENST00000317610 PTPN21Q16825 1174 aa21.89■■□□□ 1.09
RTN4-201ENST00000317610 KIFC2Q96AC6 838 aa21.89■■□□□ 1.09
RTN4-201ENST00000317610 MMP1P03956 469 aa21.88■■□□□ 1.09
RTN4-201ENST00000317610 ARID4AP29374 1257 aaPredicted RBP21.88■■□□□ 1.09
RTN4-201ENST00000317610 LDHAL6AQ6ZMR3 332 aa21.88■■□□□ 1.09
RTN4-201ENST00000317610 RSRC2Q7L4I2 434 aaKnown RBP21.88■■□□□ 1.09
RTN4-201ENST00000317610 GPR161Q8N6U8 529 aaKnown RBP21.88■■□□□ 1.09
RTN4-201ENST00000317610 ZNF579Q8NAF0 562 aaKnown RBP21.88■■□□□ 1.09
RTN4-201ENST00000317610 WDR24Q96S15 920 aa21.88■■□□□ 1.09
RTN4-201ENST00000317610 SLC26A6Q9BXS9 759 aa21.88■■□□□ 1.09
RTN4-201ENST00000317610 NFE2L3Q9Y4A8 694 aa21.88■■□□□ 1.09
RTN4-201ENST00000317610 MYH3P11055 1940 aa21.88■■□□□ 1.09
RTN4-201ENST00000317610 UBE2Q2LH0YL09 131 aa21.88■■□□□ 1.09
RTN4-201ENST00000317610 IDH1O75874 414 aaKnown RBP21.87■■□□□ 1.09
RTN4-201ENST00000317610 ITGA6P23229 1130 aa21.87■■□□□ 1.09
RTN4-201ENST00000317610 GNG11P61952 73 aa21.87■■□□□ 1.09
RTN4-201ENST00000317610 TOGARAM2Q6ZUX3 1019 aa21.87■■□□□ 1.09
RTN4-201ENST00000317610 TTLL11Q8NHH1 800 aa21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms