RNA–Protein interactions for RNA: ENST00000315948.10

LYSMD3-201, Transcript of LysM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD3, Length 4,259 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-201ENST00000315948 FAM184AQ8NB25 1140 aa8.23□□□□□ -1.09
LYSMD3-201ENST00000315948 ALDH8A1Q9H2A2 487 aaPredicted RBP8.23□□□□□ -1.09
LYSMD3-201ENST00000315948 ANGEL1Q9UNK9 670 aaKnown RBP8.23□□□□□ -1.09
LYSMD3-201ENST00000315948 SCAF8Q9UPN6 1271 aaKnown RBP8.23□□□□□ -1.09
LYSMD3-201ENST00000315948 CHD4Q14839 1912 aa8.23□□□□□ -1.09
LYSMD3-201ENST00000315948 DOCK2Q92608 1830 aa8.22□□□□□ -1.09
LYSMD3-201ENST00000315948 HMGB1P09429 215 aaKnown RBP8.22□□□□□ -1.09
LYSMD3-201ENST00000315948 SLC15A2Q16348 729 aa8.22□□□□□ -1.09
LYSMD3-201ENST00000315948 CAMK4Q16566 473 aa8.22□□□□□ -1.09
LYSMD3-201ENST00000315948 CLEC10AQ8IUN9 316 aa8.22□□□□□ -1.09
LYSMD3-201ENST00000315948 SMARCC2Q8TAQ2 1214 aa8.22□□□□□ -1.09
LYSMD3-201ENST00000315948 ERCC4Q92889 916 aaPredicted RBP8.22□□□□□ -1.09
LYSMD3-201ENST00000315948 MCM9Q9NXL9 1143 aa8.22□□□□□ -1.09
LYSMD3-201ENST00000315948 SALL1Q9NSC2 1324 aa8.22□□□□□ -1.09
LYSMD3-201ENST00000315948 ANKRD31Q8N7Z5 1873 aa8.22□□□□□ -1.09
LYSMD3-201ENST00000315948 H3BQV1 296 aa8.22□□□□□ -1.09
LYSMD3-201ENST00000315948 LDHBP07195 334 aaKnown RBP8.22□□□□□ -1.09
LYSMD3-201ENST00000315948 SHROOM1Q2M3G4 852 aaPredicted RBP8.22□□□□□ -1.09
LYSMD3-201ENST00000315948 IFFO2Q5TF58 517 aa8.22□□□□□ -1.09
LYSMD3-201ENST00000315948 NLGN1Q8N2Q7 840 aa8.22□□□□□ -1.09
LYSMD3-201ENST00000315948 SHISA4Q96DD7 197 aa8.22□□□□□ -1.09
LYSMD3-201ENST00000315948 PARP3Q9Y6F1 533 aa8.22□□□□□ -1.09
LYSMD3-201ENST00000315948 ADAMTS3O15072 1205 aa8.22□□□□□ -1.09
LYSMD3-201ENST00000315948 CPVLQ9H3G5 476 aa8.22□□□□□ -1.09
LYSMD3-201ENST00000315948 FSD2A1L4K1 749 aa8.21□□□□□ -1.09
LYSMD3-201ENST00000315948 ZBTB7AO95365 584 aa8.21□□□□□ -1.09
LYSMD3-201ENST00000315948 LIG1P18858 919 aa8.21□□□□□ -1.09
LYSMD3-201ENST00000315948 C2CD5Q86YS7 1000 aa8.21□□□□□ -1.09
LYSMD3-201ENST00000315948 BRIP1Q9BX63 1249 aa8.21□□□□□ -1.09
LYSMD3-201ENST00000315948 ORC3Q9UBD5 711 aaPredicted RBP8.21□□□□□ -1.09
LYSMD3-201ENST00000315948 GOLGA6L3A6NEY3 463 aa8.21□□□□□ -1.1
LYSMD3-201ENST00000315948 HOXA10P31260 410 aaPredicted RBP8.21□□□□□ -1.1
LYSMD3-201ENST00000315948 METAP2P50579 478 aaKnown RBP eCLIP8.21□□□□□ -1.1
LYSMD3-201ENST00000315948 RESTQ13127 1097 aa8.21□□□□□ -1.1
LYSMD3-201ENST00000315948 PICALMQ13492 652 aa8.21□□□□□ -1.1
LYSMD3-201ENST00000315948 MPNDQ8N594 471 aa8.21□□□□□ -1.1
LYSMD3-201ENST00000315948 FBXO41Q8TF61 875 aa8.21□□□□□ -1.1
LYSMD3-201ENST00000315948 TNKSO95271 1327 aa8.21□□□□□ -1.1
LYSMD3-201ENST00000315948 KLRG2A4D1S0 409 aaPredicted RBP8.21□□□□□ -1.1
LYSMD3-201ENST00000315948 USP17L3A6NCW0 530 aa8.21□□□□□ -1.1
LYSMD3-201ENST00000315948 USP17L4A6NCW7 530 aa8.21□□□□□ -1.1
LYSMD3-201ENST00000315948 USP17L1Q7RTZ2 530 aa8.21□□□□□ -1.1
LYSMD3-201ENST00000315948 ENAHQ8N8S7 591 aaPredicted RBP8.21□□□□□ -1.1
LYSMD3-201ENST00000315948 PPP1R1BQ9UD71 204 aaPredicted RBP8.21□□□□□ -1.1
LYSMD3-201ENST00000315948 FAM196BA6NMK8 535 aa8.2□□□□□ -1.1
LYSMD3-201ENST00000315948 CPLX1O14810 134 aa8.2□□□□□ -1.1
LYSMD3-201ENST00000315948 BTDP43251 543 aa8.2□□□□□ -1.1
LYSMD3-201ENST00000315948 ZNF804AQ7Z570 1209 aa8.2□□□□□ -1.1
LYSMD3-201ENST00000315948 ZNF274Q96GC6 653 aaPredicted RBP8.2□□□□□ -1.1
LYSMD3-201ENST00000315948 PGBD1Q96JS3 809 aa8.2□□□□□ -1.1
LYSMD3-201ENST00000315948 NACAP1Q9BZK3 213 aa8.2□□□□□ -1.1
LYSMD3-201ENST00000315948 RBSNQ9H1K0 784 aa8.2□□□□□ -1.1
LYSMD3-201ENST00000315948 KCNJ14Q9UNX9 436 aa8.2□□□□□ -1.1
LYSMD3-201ENST00000315948 LEMD3Q9Y2U8 911 aa8.2□□□□□ -1.1
LYSMD3-201ENST00000315948 PLEKHA8P1O95397 391 aa8.2□□□□□ -1.1
LYSMD3-201ENST00000315948 NOM1Q5C9Z4 860 aaKnown RBP8.2□□□□□ -1.1
LYSMD3-201ENST00000315948 GIMAP6Q6P9H5 292 aa8.2□□□□□ -1.1
LYSMD3-201ENST00000315948 DPP8Q6V1X1 898 aaPredicted RBP8.2□□□□□ -1.1
LYSMD3-201ENST00000315948 STAG1Q8WVM7 1258 aa8.2□□□□□ -1.1
LYSMD3-201ENST00000315948 USP28Q96RU2 1077 aa8.2□□□□□ -1.1
LYSMD3-201ENST00000315948 ATP6V0A2Q9Y487 856 aa8.2□□□□□ -1.1
LYSMD3-201ENST00000315948 MYH2Q9UKX2 1941 aa8.2□□□□□ -1.1
LYSMD3-201ENST00000315948 C21orf2O43822 256 aa8.2□□□□□ -1.1
LYSMD3-201ENST00000315948 ALX1Q15699 326 aa8.2□□□□□ -1.1
LYSMD3-201ENST00000315948 NTRK3Q16288 839 aa8.2□□□□□ -1.1
LYSMD3-201ENST00000315948 NBPF11Q86T75 865 aa8.2□□□□□ -1.1
LYSMD3-201ENST00000315948 ZFPM1Q8IX07 1006 aa8.2□□□□□ -1.1
LYSMD3-201ENST00000315948 SLC26A6Q9BXS9 759 aa8.2□□□□□ -1.1
LYSMD3-201ENST00000315948 RTFDC1Q9BY42 306 aaPredicted RBP8.2□□□□□ -1.1
LYSMD3-201ENST00000315948 ATF5Q9Y2D1 282 aaPredicted RBP8.2□□□□□ -1.1
LYSMD3-201ENST00000315948 COL11A2P13942 1736 aaPredicted RBP8.2□□□□□ -1.1
LYSMD3-201ENST00000315948 GOLGA8AA7E2F4 631 aa8.2□□□□□ -1.1
LYSMD3-201ENST00000315948 RGL2O15211 777 aa8.2□□□□□ -1.1
LYSMD3-201ENST00000315948 ZBTB43O43298 467 aa8.2□□□□□ -1.1
LYSMD3-201ENST00000315948 BBOX1O75936 387 aa8.2□□□□□ -1.1
LYSMD3-201ENST00000315948 KIAA0825Q8IV33 1275 aa8.2□□□□□ -1.1
LYSMD3-201ENST00000315948 SLC12A7Q9Y666 1083 aa8.2□□□□□ -1.1
LYSMD3-201ENST00000315948 DUOX1Q9NRD9 1551 aa8.19□□□□□ -1.1
LYSMD3-201ENST00000315948 FAM205CA6NFA0 338 aa8.19□□□□□ -1.1
LYSMD3-201ENST00000315948 USP5P45974 858 aa8.19□□□□□ -1.1
LYSMD3-201ENST00000315948 EVCP57679 992 aa8.19□□□□□ -1.1
LYSMD3-201ENST00000315948 AOC3Q16853 763 aa8.19□□□□□ -1.1
LYSMD3-201ENST00000315948 GRPEL1Q9HAV7 217 aa8.19□□□□□ -1.1
LYSMD3-201ENST00000315948 DDX4Q9NQI0 724 aaKnown RBP8.19□□□□□ -1.1
LYSMD3-201ENST00000315948 KLHL34Q8N239 644 aa8.19□□□□□ -1.1
LYSMD3-201ENST00000315948 LEO1Q8WVC0 666 aaPredicted RBP8.19□□□□□ -1.1
LYSMD3-201ENST00000315948 CRAMP1Q96RY5 1269 aa8.19□□□□□ -1.1
LYSMD3-201ENST00000315948 MKRN1Q9UHC7 482 aaKnown RBP8.19□□□□□ -1.1
LYSMD3-201ENST00000315948 CLIC4Q9Y696 253 aa8.19□□□□□ -1.1
LYSMD3-201ENST00000315948 MRVI1Q9Y6F6 885 aa8.19□□□□□ -1.1
LYSMD3-201ENST00000315948 EIF6P56537 245 aaKnown RBP8.19□□□□□ -1.1
LYSMD3-201ENST00000315948 NFIAQ12857 509 aa8.19□□□□□ -1.1
LYSMD3-201ENST00000315948 IL17RBQ9NRM6 502 aa8.19□□□□□ -1.1
LYSMD3-201ENST00000315948 ADAMTSL1Q8N6G6 1762 aa8.19□□□□□ -1.1
LYSMD3-201ENST00000315948 TNS1Q9HBL0 1735 aaKnown RBP8.19□□□□□ -1.1
LYSMD3-201ENST00000315948 CCDC69A6NI79 296 aa8.18□□□□□ -1.1
LYSMD3-201ENST00000315948 IL1R1P14778 569 aa8.18□□□□□ -1.1
LYSMD3-201ENST00000315948 WTAPQ15007 396 aa8.18□□□□□ -1.1
LYSMD3-201ENST00000315948 CKAP2LQ8IYA6 745 aa8.18□□□□□ -1.1
LYSMD3-201ENST00000315948 OXER1Q8TDS5 423 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms