RNA–Protein interactions for RNA: ENST00000308521.9

APOBEC3F-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3F, Length 2,694 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-201ENST00000308521 FOXP2O15409 715 aa11.96□□□□□ -0.49
APOBEC3F-201ENST00000308521 GPAA1O43292 621 aa11.96□□□□□ -0.49
APOBEC3F-201ENST00000308521 ADD2P35612 726 aa11.96□□□□□ -0.49
APOBEC3F-201ENST00000308521 CEP135Q66GS9 1140 aa11.96□□□□□ -0.49
APOBEC3F-201ENST00000308521 STOX1Q6ZVD7 989 aa11.96□□□□□ -0.49
APOBEC3F-201ENST00000308521 LRRC8AQ8IWT6 810 aa11.96□□□□□ -0.49
APOBEC3F-201ENST00000308521 FAM84BQ96KN1 310 aaPredicted RBP11.96□□□□□ -0.49
APOBEC3F-201ENST00000308521 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.96□□□□□ -0.49
APOBEC3F-201ENST00000308521 ANKIB1Q9P2G1 1089 aa11.96□□□□□ -0.49
APOBEC3F-201ENST00000308521 UBR3Q6ZT12 1888 aa11.96□□□□□ -0.49
APOBEC3F-201ENST00000308521 PDE6AP16499 860 aa11.96□□□□□ -0.5
APOBEC3F-201ENST00000308521 EZH2Q15910 746 aaKnown RBP11.96□□□□□ -0.5
APOBEC3F-201ENST00000308521 CCDC144BQ3MJ40 725 aa11.96□□□□□ -0.5
APOBEC3F-201ENST00000308521 CCDC144CPQ8IYA2 1237 aa11.96□□□□□ -0.5
APOBEC3F-201ENST00000308521 APPBP2Q92624 585 aa11.96□□□□□ -0.5
APOBEC3F-201ENST00000308521 ZNF512BQ96KM6 892 aaPredicted RBP11.96□□□□□ -0.5
APOBEC3F-201ENST00000308521 LRP5O75197 1615 aa11.96□□□□□ -0.5
APOBEC3F-201ENST00000308521 RFX7Q2KHR2 1363 aa11.96□□□□□ -0.5
APOBEC3F-201ENST00000308521 GOLGA6L19H0YKK7 550 aa11.95□□□□□ -0.5
APOBEC3F-201ENST00000308521 POLRMTO00411 1230 aaKnown RBP11.95□□□□□ -0.5
APOBEC3F-201ENST00000308521 APPP05067 770 aa11.95□□□□□ -0.5
APOBEC3F-201ENST00000308521 RPGRQ92834 1020 aaKnown RBP11.95□□□□□ -0.5
APOBEC3F-201ENST00000308521 LRP2BPQ9P2M1 347 aa11.95□□□□□ -0.5
APOBEC3F-201ENST00000308521 FGAP02671 866 aa11.95□□□□□ -0.5
APOBEC3F-201ENST00000308521 STK3Q13188 491 aa11.95□□□□□ -0.5
APOBEC3F-201ENST00000308521 UBE4AQ14139 1066 aa11.95□□□□□ -0.5
APOBEC3F-201ENST00000308521 TTF1Q15361 905 aaPredicted RBP11.95□□□□□ -0.5
APOBEC3F-201ENST00000308521 STX1AQ16623 288 aa11.95□□□□□ -0.5
APOBEC3F-201ENST00000308521 NYAP1Q6ZVC0 841 aa11.95□□□□□ -0.5
APOBEC3F-201ENST00000308521 KRT222Q8N1A0 295 aa11.95□□□□□ -0.5
APOBEC3F-201ENST00000308521 MIGA1Q8NAN2 632 aa11.95□□□□□ -0.5
APOBEC3F-201ENST00000308521 ZNF622Q969S3 477 aaKnown RBP eCLIP11.95□□□□□ -0.5
APOBEC3F-201ENST00000308521 AKT1S1Q96B36 256 aa11.95□□□□□ -0.5
APOBEC3F-201ENST00000308521 LAMB2P55268 1798 aa11.95□□□□□ -0.5
APOBEC3F-201ENST00000308521 ZFYP08048 801 aaPredicted RBP11.94□□□□□ -0.5
APOBEC3F-201ENST00000308521 ST5P78524 1137 aa11.94□□□□□ -0.5
APOBEC3F-201ENST00000308521 CAVIN4Q5BKX8 364 aa11.94□□□□□ -0.5
APOBEC3F-201ENST00000308521 ATL3Q6DD88 541 aa11.94□□□□□ -0.5
APOBEC3F-201ENST00000308521 BRF1Q92994 677 aa11.94□□□□□ -0.5
APOBEC3F-201ENST00000308521 NEK1Q96PY6 1258 aa11.94□□□□□ -0.5
APOBEC3F-201ENST00000308521 LLPHQ9BRT6 129 aaKnown RBP11.94□□□□□ -0.5
APOBEC3F-201ENST00000308521 RCOR1Q9UKL0 485 aa11.94□□□□□ -0.5
APOBEC3F-201ENST00000308521 TNRC6CQ9HCJ0 1690 aaKnown RBP11.94□□□□□ -0.5
APOBEC3F-201ENST00000308521 LRRFIP1Q32MZ4 808 aaKnown RBP11.94□□□□□ -0.5
APOBEC3F-201ENST00000308521 STK11IPQ8N1F8 1099 aa11.94□□□□□ -0.5
APOBEC3F-201ENST00000308521 KIF18AQ8NI77 898 aa11.94□□□□□ -0.5
APOBEC3F-201ENST00000308521 SMARCC2Q8TAQ2 1214 aa11.94□□□□□ -0.5
APOBEC3F-201ENST00000308521 DSCC1Q9BVC3 393 aa11.94□□□□□ -0.5
APOBEC3F-201ENST00000308521 MYH15Q9Y2K3 1946 aa11.94□□□□□ -0.5
APOBEC3F-201ENST00000308521 CASZ1Q86V15 1759 aa11.94□□□□□ -0.5
APOBEC3F-201ENST00000308521 TCRBV5S4A2TA0A5A2 114 aa11.94□□□□□ -0.5
APOBEC3F-201ENST00000308521 CAPN2P17655 700 aa11.94□□□□□ -0.5
APOBEC3F-201ENST00000308521 GRAPQ13588 217 aa11.94□□□□□ -0.5
APOBEC3F-201ENST00000308521 NAA16Q6N069 864 aaPredicted RBP11.94□□□□□ -0.5
APOBEC3F-201ENST00000308521 ZNF397Q8NF99 534 aaPredicted RBP11.94□□□□□ -0.5
APOBEC3F-201ENST00000308521 GRAPLQ8TC17 118 aaPredicted RBP11.94□□□□□ -0.5
APOBEC3F-201ENST00000308521 ARMT1Q9H993 441 aa11.94□□□□□ -0.5
APOBEC3F-201ENST00000308521 RAI14Q9P0K7 980 aa11.94□□□□□ -0.5
APOBEC3F-201ENST00000308521 DENND2AQ9ULE3 1009 aa11.94□□□□□ -0.5
APOBEC3F-201ENST00000308521 ZNF804BA4D1E1 1349 aa11.93□□□□□ -0.5
APOBEC3F-201ENST00000308521 H3BQV1 296 aa11.93□□□□□ -0.5
APOBEC3F-201ENST00000308521 KIF2AO00139 706 aaPredicted RBP11.93□□□□□ -0.5
APOBEC3F-201ENST00000308521 PRKAB2O43741 272 aa11.93□□□□□ -0.5
APOBEC3F-201ENST00000308521 MAP3K12Q12852 859 aa11.93□□□□□ -0.5
APOBEC3F-201ENST00000308521 IFFO2Q5TF58 517 aa11.93□□□□□ -0.5
APOBEC3F-201ENST00000308521 OLFM4Q6UX06 510 aa11.93□□□□□ -0.5
APOBEC3F-201ENST00000308521 AIDAQ96BJ3 306 aa11.93□□□□□ -0.5
APOBEC3F-201ENST00000308521 FAM53CQ9NYF3 392 aa11.93□□□□□ -0.5
APOBEC3F-201ENST00000308521 E7EWF7 191 aa11.93□□□□□ -0.5
APOBEC3F-201ENST00000308521 JAK2O60674 1132 aa11.93□□□□□ -0.5
APOBEC3F-201ENST00000308521 MBD4O95243 580 aa11.93□□□□□ -0.5
APOBEC3F-201ENST00000308521 MMP10P09238 476 aa11.93□□□□□ -0.5
APOBEC3F-201ENST00000308521 ADD1P35611 737 aaKnown RBP11.93□□□□□ -0.5
APOBEC3F-201ENST00000308521 PTPN14Q15678 1187 aa11.93□□□□□ -0.5
APOBEC3F-201ENST00000308521 ADGRA1Q86SQ6 560 aa11.93□□□□□ -0.5
APOBEC3F-201ENST00000308521 INCENPQ9NQS7 918 aa11.93□□□□□ -0.5
APOBEC3F-201ENST00000308521 COL24A1Q17RW2 1714 aa11.92□□□□□ -0.5
APOBEC3F-201ENST00000308521 PPFIA3O75145 1194 aa11.92□□□□□ -0.5
APOBEC3F-201ENST00000308521 HIBADHP31937 336 aaKnown RBP11.92□□□□□ -0.5
APOBEC3F-201ENST00000308521 SAMD1Q6SPF0 538 aaPredicted RBP11.92□□□□□ -0.5
APOBEC3F-201ENST00000308521 Q6ZUG5 572 aa11.92□□□□□ -0.5
APOBEC3F-201ENST00000308521 C11orf57Q6ZUT1 292 aaPredicted RBP11.92□□□□□ -0.5
APOBEC3F-201ENST00000308521 DEFB132Q7Z7B7 95 aa11.92□□□□□ -0.5
APOBEC3F-201ENST00000308521 ERO1AQ96HE7 468 aa11.92□□□□□ -0.5
APOBEC3F-201ENST00000308521 PDGFDQ9GZP0 370 aaPredicted RBP11.92□□□□□ -0.5
APOBEC3F-201ENST00000308521 ANO10Q9NW15 660 aa11.92□□□□□ -0.5
APOBEC3F-201ENST00000308521 CCZ1BP86790 482 aa11.92□□□□□ -0.5
APOBEC3F-201ENST00000308521 CCZ1P86791 482 aaPredicted RBP11.92□□□□□ -0.5
APOBEC3F-201ENST00000308521 UBE3CQ15386 1083 aa11.92□□□□□ -0.5
APOBEC3F-201ENST00000308521 NKX2-3Q8TAU0 364 aa11.92□□□□□ -0.5
APOBEC3F-201ENST00000308521 TRIM34Q9BYJ4 488 aa11.92□□□□□ -0.5
APOBEC3F-201ENST00000308521 GNL3LQ9NVN8 582 aaKnown RBP11.92□□□□□ -0.5
APOBEC3F-201ENST00000308521 PNPLA7Q6ZV29 1317 aa11.92□□□□□ -0.5
APOBEC3F-201ENST00000308521 PFKFB2O60825 505 aa11.91□□□□□ -0.5
APOBEC3F-201ENST00000308521 COL1A1P02452 1464 aaPredicted RBP11.91□□□□□ -0.5
APOBEC3F-201ENST00000308521 SKILP12757 684 aa11.91□□□□□ -0.5
APOBEC3F-201ENST00000308521 GSDMDP57764 484 aa11.91□□□□□ -0.5
APOBEC3F-201ENST00000308521 GPSM2P81274 684 aa11.91□□□□□ -0.5
APOBEC3F-201ENST00000308521 FBXO33Q7Z6M2 555 aa11.91□□□□□ -0.5
APOBEC3F-201ENST00000308521 CCAR1Q8IX12 1150 aaKnown RBP11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms