RNA–Protein interactions for RNA: ENST00000307142.8

SYNPO2-201, Transcript of synaptopodin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNPO2, Length 7,295 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-201ENST00000307142 CHMLP26374 656 aa12.12□□□□□ -0.47
SYNPO2-201ENST00000307142 HOOK3Q86VS8 718 aa12.12□□□□□ -0.47
SYNPO2-201ENST00000307142 TMEM87BQ96K49 555 aa12.12□□□□□ -0.47
SYNPO2-201ENST00000307142 PRDM15P57071 1507 aaPredicted RBP12.12□□□□□ -0.47
SYNPO2-201ENST00000307142 RAD50Q92878 1312 aa12.12□□□□□ -0.47
SYNPO2-201ENST00000307142 KIF5CO60282 957 aa12.12□□□□□ -0.47
SYNPO2-201ENST00000307142 TMX1Q9H3N1 280 aa12.12□□□□□ -0.47
SYNPO2-201ENST00000307142 PABPN1LA6NDY0 278 aaKnown RBP12.12□□□□□ -0.47
SYNPO2-201ENST00000307142 BBOX1O75936 387 aa12.12□□□□□ -0.47
SYNPO2-201ENST00000307142 CASQ1P31415 396 aa12.12□□□□□ -0.47
SYNPO2-201ENST00000307142 NCAPH2Q6IBW4 605 aa12.12□□□□□ -0.47
SYNPO2-201ENST00000307142 DNM2P50570 870 aa12.12□□□□□ -0.47
SYNPO2-201ENST00000307142 TBC1D2Q9BYX2 928 aa12.12□□□□□ -0.47
SYNPO2-201ENST00000307142 GRPEL1Q9HAV7 217 aa12.12□□□□□ -0.47
SYNPO2-201ENST00000307142 AK2P54819 239 aa12.12□□□□□ -0.47
SYNPO2-201ENST00000307142 CDAN1Q8IWY9 1227 aa12.12□□□□□ -0.47
SYNPO2-201ENST00000307142 QRICH2Q9H0J4 1663 aa12.11□□□□□ -0.47
SYNPO2-201ENST00000307142 DPP9Q86TI2 863 aa12.11□□□□□ -0.47
SYNPO2-201ENST00000307142 CCDC117Q8IWD4 279 aaPredicted RBP12.11□□□□□ -0.47
SYNPO2-201ENST00000307142 ANKRD35Q8N283 1001 aa12.11□□□□□ -0.47
SYNPO2-201ENST00000307142 FAM227BQ96M60 508 aa12.11□□□□□ -0.47
SYNPO2-201ENST00000307142 GLT8D2Q9H1C3 349 aa12.11□□□□□ -0.47
SYNPO2-201ENST00000307142 ALAS1P13196 640 aa12.11□□□□□ -0.47
SYNPO2-201ENST00000307142 V9GY48 417 aaPredicted RBP12.11□□□□□ -0.47
SYNPO2-201ENST00000307142 IQGAP3Q86VI3 1631 aa12.11□□□□□ -0.47
SYNPO2-201ENST00000307142 DKC1O60832 514 aaKnown RBP eCLIP12.11□□□□□ -0.47
SYNPO2-201ENST00000307142 FLOT1O75955 427 aa12.11□□□□□ -0.47
SYNPO2-201ENST00000307142 ADCY7P51828 1080 aa12.11□□□□□ -0.47
SYNPO2-201ENST00000307142 METTL13Q8N6R0 699 aa12.11□□□□□ -0.47
SYNPO2-201ENST00000307142 NPC1L1Q9UHC9 1359 aa12.11□□□□□ -0.47
SYNPO2-201ENST00000307142 VWA3AA6NCI4 1184 aa12.11□□□□□ -0.47
SYNPO2-201ENST00000307142 PIK3AP1Q6ZUJ8 805 aa12.11□□□□□ -0.47
SYNPO2-201ENST00000307142 TMC4Q7Z404 712 aa12.11□□□□□ -0.47
SYNPO2-201ENST00000307142 NBPF3Q9H094 633 aa12.11□□□□□ -0.47
SYNPO2-201ENST00000307142 MLXIPQ9HAP2 919 aa12.11□□□□□ -0.47
SYNPO2-201ENST00000307142 PSMA7O14818 248 aa12.11□□□□□ -0.47
SYNPO2-201ENST00000307142 MRPS9P82933 396 aaKnown RBP12.11□□□□□ -0.47
SYNPO2-201ENST00000307142 SDR42E1Q8WUS8 393 aa12.11□□□□□ -0.47
SYNPO2-201ENST00000307142 HSP90AA4PQ58FG1 418 aa12.11□□□□□ -0.47
SYNPO2-201ENST00000307142 KBTBD3Q8NAB2 608 aa12.11□□□□□ -0.47
SYNPO2-201ENST00000307142 FNBP1Q96RU3 617 aa12.11□□□□□ -0.47
SYNPO2-201ENST00000307142 CLTCL1P53675 1640 aa12.11□□□□□ -0.47
SYNPO2-201ENST00000307142 N4BP3O15049 544 aa12.1□□□□□ -0.47
SYNPO2-201ENST00000307142 LRRC45Q96CN5 670 aa12.1□□□□□ -0.47
SYNPO2-201ENST00000307142 MASTLQ96GX5 879 aa12.1□□□□□ -0.47
SYNPO2-201ENST00000307142 CSRNP1Q96S65 589 aa12.1□□□□□ -0.47
SYNPO2-201ENST00000307142 ZMYM4Q5VZL5 1548 aa12.1□□□□□ -0.47
SYNPO2-201ENST00000307142 TNS3Q68CZ2 1445 aa12.1□□□□□ -0.47
SYNPO2-201ENST00000307142 TESPA1A2RU30 521 aaPredicted RBP12.1□□□□□ -0.47
SYNPO2-201ENST00000307142 CCDC65Q8IXS2 484 aa12.1□□□□□ -0.47
SYNPO2-201ENST00000307142 TAOK3Q9H2K8 898 aa12.1□□□□□ -0.47
SYNPO2-201ENST00000307142 FRMD4BQ9Y2L6 1034 aa12.1□□□□□ -0.47
SYNPO2-201ENST00000307142 UBE2HP62256 183 aa12.1□□□□□ -0.47
SYNPO2-201ENST00000307142 LRRC24Q50LG9 513 aa12.1□□□□□ -0.47
SYNPO2-201ENST00000307142 SPAG5Q96R06 1193 aa12.1□□□□□ -0.47
SYNPO2-201ENST00000307142 SLC27A2O14975 620 aa12.1□□□□□ -0.47
SYNPO2-201ENST00000307142 TMC6Q7Z403 805 aa12.1□□□□□ -0.47
SYNPO2-201ENST00000307142 LUZP1Q86V48 1076 aa12.1□□□□□ -0.47
SYNPO2-201ENST00000307142 ANGEL1Q9UNK9 670 aaKnown RBP12.1□□□□□ -0.47
SYNPO2-201ENST00000307142 CEP83Q9Y592 693 aa12.1□□□□□ -0.47
SYNPO2-201ENST00000307142 ADGRB3O60242 1522 aa12.1□□□□□ -0.47
SYNPO2-201ENST00000307142 ZSCAN12O43309 604 aa12.1□□□□□ -0.47
SYNPO2-201ENST00000307142 DEXIO95424 95 aa12.1□□□□□ -0.47
SYNPO2-201ENST00000307142 LRRC47Q8N1G4 583 aaKnown RBP12.1□□□□□ -0.47
SYNPO2-201ENST00000307142 GLG1Q92896 1179 aa12.1□□□□□ -0.47
SYNPO2-201ENST00000307142 ABCA9Q8IUA7 1624 aa12.1□□□□□ -0.47
SYNPO2-201ENST00000307142 ARHGEF35A5YM69 484 aa12.09□□□□□ -0.47
SYNPO2-201ENST00000307142 PPARAQ07869 468 aa12.09□□□□□ -0.47
SYNPO2-201ENST00000307142 ABCB5Q2M3G0 1257 aa12.09□□□□□ -0.47
SYNPO2-201ENST00000307142 CIAPIN1Q6FI81 312 aa12.09□□□□□ -0.47
SYNPO2-201ENST00000307142 LZTS2Q9BRK4 669 aa12.09□□□□□ -0.47
SYNPO2-201ENST00000307142 PRKAG2Q9UGJ0 569 aa12.09□□□□□ -0.47
SYNPO2-201ENST00000307142 CNPY2Q9Y2B0 182 aa12.09□□□□□ -0.47
SYNPO2-201ENST00000307142 ERBB4Q15303 1308 aa12.09□□□□□ -0.47
SYNPO2-201ENST00000307142 USP17L3A6NCW0 530 aa12.09□□□□□ -0.47
SYNPO2-201ENST00000307142 USP17L4A6NCW7 530 aa12.09□□□□□ -0.47
SYNPO2-201ENST00000307142 SV2BQ7L1I2 683 aa12.09□□□□□ -0.47
SYNPO2-201ENST00000307142 USP17L1Q7RTZ2 530 aa12.09□□□□□ -0.47
SYNPO2-201ENST00000307142 USP17L12C9JPN9 530 aa12.09□□□□□ -0.47
SYNPO2-201ENST00000307142 USP17L21D6R901 530 aa12.09□□□□□ -0.47
SYNPO2-201ENST00000307142 SPTLC2O15270 562 aa12.09□□□□□ -0.47
SYNPO2-201ENST00000307142 ALS2CR12Q96Q35 445 aa12.09□□□□□ -0.47
SYNPO2-201ENST00000307142 ALKQ9UM73 1620 aa12.09□□□□□ -0.47
SYNPO2-201ENST00000307142 PRR36Q9H6K5 1346 aa12.09□□□□□ -0.47
SYNPO2-201ENST00000307142 RPS6KB1P23443 525 aa12.09□□□□□ -0.47
SYNPO2-201ENST00000307142 ARID5AQ03989 594 aa12.09□□□□□ -0.47
SYNPO2-201ENST00000307142 CEP135Q66GS9 1140 aa12.09□□□□□ -0.47
SYNPO2-201ENST00000307142 NLRX1Q86UT6 975 aa12.09□□□□□ -0.47
SYNPO2-201ENST00000307142 SEC31BQ9NQW1 1179 aa12.09□□□□□ -0.47
SYNPO2-201ENST00000307142 SSX2IPQ9Y2D8 614 aa12.09□□□□□ -0.47
SYNPO2-201ENST00000307142 GLI2P10070 1586 aa12.09□□□□□ -0.47
SYNPO2-201ENST00000307142 TXKP42681 527 aa12.09□□□□□ -0.47
SYNPO2-201ENST00000307142 DCAF17Q5H9S7 520 aaPredicted RBP12.09□□□□□ -0.47
SYNPO2-201ENST00000307142 SLC27A3Q5K4L6 730 aa12.09□□□□□ -0.47
SYNPO2-201ENST00000307142 IREB2P48200 963 aaKnown RBP12.08□□□□□ -0.47
SYNPO2-201ENST00000307142 PDE4DQ08499 809 aa12.08□□□□□ -0.47
SYNPO2-201ENST00000307142 HAUS3Q68CZ6 603 aa12.08□□□□□ -0.47
SYNPO2-201ENST00000307142 PROCA1Q8NCQ7 364 aaPredicted RBP12.08□□□□□ -0.47
SYNPO2-201ENST00000307142 EZRP15311 586 aaKnown RBP12.08□□□□□ -0.48
SYNPO2-201ENST00000307142 SLC10A4Q96EP9 437 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms