RNA–Protein interactions for RNA: ENST00000286749.3

SLC28A1-201, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,636 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-201ENST00000286749 SHANK3Q9BYB0 1731 aa15.24■□□□□ 0.03
SLC28A1-201ENST00000286749 FOXN1O15353 648 aa15.23■□□□□ 0.03
SLC28A1-201ENST00000286749 PDE4BQ07343 736 aa15.23■□□□□ 0.03
SLC28A1-201ENST00000286749 TRIM28Q13263 835 aaKnown RBP15.23■□□□□ 0.03
SLC28A1-201ENST00000286749 SPECC1Q5M775 1068 aa15.23■□□□□ 0.03
SLC28A1-201ENST00000286749 CCDC102BQ68D86 513 aa15.23■□□□□ 0.03
SLC28A1-201ENST00000286749 KIF6Q6ZMV9 814 aa15.23■□□□□ 0.03
SLC28A1-201ENST00000286749 REXO1L1PQ8IX06 675 aa15.23■□□□□ 0.03
SLC28A1-201ENST00000286749 IGDCC4Q8TDY8 1250 aa15.23■□□□□ 0.03
SLC28A1-201ENST00000286749 GREM2Q9H772 168 aa15.23■□□□□ 0.03
SLC28A1-201ENST00000286749 LY9Q9HBG7 655 aa15.23■□□□□ 0.03
SLC28A1-201ENST00000286749 FAM217BQ9NTX9 383 aaPredicted RBP15.23■□□□□ 0.03
SLC28A1-201ENST00000286749 MYH3P11055 1940 aa15.23■□□□□ 0.03
SLC28A1-201ENST00000286749 BMP6P22004 513 aa15.23■□□□□ 0.03
SLC28A1-201ENST00000286749 ITGA6P23229 1130 aa15.23■□□□□ 0.03
SLC28A1-201ENST00000286749 TMEM67Q5HYA8 995 aa15.23■□□□□ 0.03
SLC28A1-201ENST00000286749 SLC26A6Q9BXS9 759 aa15.23■□□□□ 0.03
SLC28A1-201ENST00000286749 INTS13Q9NVM9 706 aa15.23■□□□□ 0.03
SLC28A1-201ENST00000286749 PDE6AP16499 860 aa15.22■□□□□ 0.03
SLC28A1-201ENST00000286749 GPTP24298 496 aa15.22■□□□□ 0.03
SLC28A1-201ENST00000286749 BMS1Q14692 1282 aaKnown RBP15.22■□□□□ 0.03
SLC28A1-201ENST00000286749 NKX1-1Q15270 411 aaPredicted RBP15.22■□□□□ 0.03
SLC28A1-201ENST00000286749 TTF1Q15361 905 aaPredicted RBP15.22■□□□□ 0.03
SLC28A1-201ENST00000286749 TMEM87BQ96K49 555 aa15.22■□□□□ 0.03
SLC28A1-201ENST00000286749 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.22■□□□□ 0.03
SLC28A1-201ENST00000286749 CNNM1Q9NRU3 951 aa15.22■□□□□ 0.03
SLC28A1-201ENST00000286749 WWC3Q9ULE0 1092 aa15.22■□□□□ 0.03
SLC28A1-201ENST00000286749 URI1O94763 535 aaPredicted RBP15.22■□□□□ 0.03
SLC28A1-201ENST00000286749 UBE3CQ15386 1083 aa15.22■□□□□ 0.03
SLC28A1-201ENST00000286749 PRDM11Q9NQV5 511 aa15.22■□□□□ 0.03
SLC28A1-201ENST00000286749 TOGARAM1Q9Y4F4 1720 aa15.21■□□□□ 0.03
SLC28A1-201ENST00000286749 TMEM139Q8IV31 216 aa15.21■□□□□ 0.03
SLC28A1-201ENST00000286749 FAM177A1Q8N128 213 aaPredicted RBP15.21■□□□□ 0.03
SLC28A1-201ENST00000286749 KRI1Q8N9T8 703 aaKnown RBP15.21■□□□□ 0.03
SLC28A1-201ENST00000286749 MNS1Q8NEH6 495 aa15.21■□□□□ 0.03
SLC28A1-201ENST00000286749 TTLL11Q8NHH1 800 aa15.21■□□□□ 0.03
SLC28A1-201ENST00000286749 UBXN4Q92575 508 aa15.21■□□□□ 0.03
SLC28A1-201ENST00000286749 FHOD1Q9Y613 1164 aa15.21■□□□□ 0.03
SLC28A1-201ENST00000286749 STRCP1A6NGW2 1772 aa15.21■□□□□ 0.03
SLC28A1-201ENST00000286749 PHKA1P46020 1223 aa15.21■□□□□ 0.03
SLC28A1-201ENST00000286749 SGMS1Q86VZ5 419 aa15.21■□□□□ 0.03
SLC28A1-201ENST00000286749 STK11IPQ8N1F8 1099 aa15.21■□□□□ 0.03
SLC28A1-201ENST00000286749 MYO1BO43795 1136 aa15.2■□□□□ 0.02
SLC28A1-201ENST00000286749 CTDSPL2Q05D32 466 aa15.2■□□□□ 0.02
SLC28A1-201ENST00000286749 SSRP1Q08945 709 aaKnown RBP15.2■□□□□ 0.02
SLC28A1-201ENST00000286749 DNAJC10Q8IXB1 793 aa15.2■□□□□ 0.02
SLC28A1-201ENST00000286749 AIDAQ96BJ3 306 aa15.2■□□□□ 0.02
SLC28A1-201ENST00000286749 ZNF512BQ96KM6 892 aaPredicted RBP15.2■□□□□ 0.02
SLC28A1-201ENST00000286749 PPP2R2CQ9Y2T4 447 aa15.2■□□□□ 0.02
SLC28A1-201ENST00000286749 PARP3Q9Y6F1 533 aa15.2■□□□□ 0.02
SLC28A1-201ENST00000286749 ANKRD18BA2A2Z9 1011 aa15.2■□□□□ 0.02
SLC28A1-201ENST00000286749 VWA3AA6NCI4 1184 aa15.2■□□□□ 0.02
SLC28A1-201ENST00000286749 BTBD18B2RXH4 712 aa15.2■□□□□ 0.02
SLC28A1-201ENST00000286749 ZSCAN12O43309 604 aa15.2■□□□□ 0.02
SLC28A1-201ENST00000286749 IL2RBP14784 551 aa15.2■□□□□ 0.02
SLC28A1-201ENST00000286749 MDM2Q00987 491 aaPredicted RBP15.2■□□□□ 0.02
SLC28A1-201ENST00000286749 GRIN1Q05586 938 aa15.2■□□□□ 0.02
SLC28A1-201ENST00000286749 FCHSD1Q86WN1 690 aa15.2■□□□□ 0.02
SLC28A1-201ENST00000286749 NOSTRINQ8IVI9 506 aa15.2■□□□□ 0.02
SLC28A1-201ENST00000286749 PDILTQ8N807 584 aa15.2■□□□□ 0.02
SLC28A1-201ENST00000286749 VGLL2Q8N8G2 317 aa15.2■□□□□ 0.02
SLC28A1-201ENST00000286749 STRBPQ96SI9 672 aaKnown RBP15.2■□□□□ 0.02
SLC28A1-201ENST00000286749 CARD6Q9BX69 1037 aa15.2■□□□□ 0.02
SLC28A1-201ENST00000286749 TBC1D2BQ9UPU7 963 aa15.2■□□□□ 0.02
SLC28A1-201ENST00000286749 SLC12A7Q9Y666 1083 aa15.2■□□□□ 0.02
SLC28A1-201ENST00000286749 TCRBV5S4A2TA0A5A2 114 aa15.19■□□□□ 0.02
SLC28A1-201ENST00000286749 IFIT3O14879 490 aaKnown RBP15.19■□□□□ 0.02
SLC28A1-201ENST00000286749 ARHGAP6O43182 974 aa15.19■□□□□ 0.02
SLC28A1-201ENST00000286749 TADA3O75528 432 aa15.19■□□□□ 0.02
SLC28A1-201ENST00000286749 PNMA6AP0CW24 399 aaPredicted RBP15.19■□□□□ 0.02
SLC28A1-201ENST00000286749 GUCY1A2P33402 732 aa15.19■□□□□ 0.02
SLC28A1-201ENST00000286749 HLFQ16534 295 aa15.19■□□□□ 0.02
SLC28A1-201ENST00000286749 ZSWIM5Q9P217 1185 aa15.19■□□□□ 0.02
SLC28A1-201ENST00000286749 MAN1B1Q9UKM7 699 aa15.19■□□□□ 0.02
SLC28A1-201ENST00000286749 CDHR2Q9BYE9 1310 aa15.19■□□□□ 0.02
SLC28A1-201ENST00000286749 STK36Q9NRP7 1315 aa15.19■□□□□ 0.02
SLC28A1-201ENST00000286749 FMNL1O95466 1100 aaPredicted RBP15.19■□□□□ 0.02
SLC28A1-201ENST00000286749 PRR29P0C7W0 189 aa15.19■□□□□ 0.02
SLC28A1-201ENST00000286749 TOB1P50616 345 aaPredicted RBP15.19■□□□□ 0.02
SLC28A1-201ENST00000286749 CTSWP56202 376 aa15.19■□□□□ 0.02
SLC28A1-201ENST00000286749 EPB41L4AQ9HCS5 686 aaPredicted RBP15.19■□□□□ 0.02
SLC28A1-201ENST00000286749 KCNJ14Q9UNX9 436 aa15.19■□□□□ 0.02
SLC28A1-201ENST00000286749 LRP6O75581 1613 aa15.19■□□□□ 0.02
SLC28A1-201ENST00000286749 DCCP43146 1447 aa15.18■□□□□ 0.02
SLC28A1-201ENST00000286749 PDE8BO95263 885 aa15.18■□□□□ 0.02
SLC28A1-201ENST00000286749 FMR1Q06787 632 aaKnown RBP eCLIP15.18■□□□□ 0.02
SLC28A1-201ENST00000286749 TBX2Q13207 712 aaPredicted RBP15.18■□□□□ 0.02
SLC28A1-201ENST00000286749 POSTNQ15063 836 aa15.18■□□□□ 0.02
SLC28A1-201ENST00000286749 ZNF827Q17R98 1081 aa15.18■□□□□ 0.02
SLC28A1-201ENST00000286749 NLRP10Q86W26 655 aa15.18■□□□□ 0.02
SLC28A1-201ENST00000286749 TRMT44Q8IYL2 757 aaKnown RBP15.18■□□□□ 0.02
SLC28A1-201ENST00000286749 BAG1Q99933 345 aaPredicted RBP15.18■□□□□ 0.02
SLC28A1-201ENST00000286749 SRRTQ9BXP5 876 aaKnown RBP15.18■□□□□ 0.02
SLC28A1-201ENST00000286749 TMOD3Q9NYL9 352 aa15.18■□□□□ 0.02
SLC28A1-201ENST00000286749 TACC3Q9Y6A5 838 aa15.18■□□□□ 0.02
SLC28A1-201ENST00000286749 MAP3K15Q6ZN16 1313 aa15.18■□□□□ 0.02
SLC28A1-201ENST00000286749 MMP1P03956 469 aa15.18■□□□□ 0.02
SLC28A1-201ENST00000286749 LIFRP42702 1097 aa15.18■□□□□ 0.02
SLC28A1-201ENST00000286749 GIGYF2Q6Y7W6 1299 aaKnown RBP15.18■□□□□ 0.02
SLC28A1-201ENST00000286749 DIS3L2Q8IYB7 885 aaKnown RBP15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms