RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 TTC41PQ6P2S7 1318 aa7.01□□□□□ -1.29
TOPBP1-201ENST00000260810 MEFVO15553 781 aaPredicted RBP7.01□□□□□ -1.29
TOPBP1-201ENST00000260810 SNW1Q13573 536 aaKnown RBP7.01□□□□□ -1.29
TOPBP1-201ENST00000260810 SPP2Q13103 211 aa7□□□□□ -1.29
TOPBP1-201ENST00000260810 MTMR8Q96EF0 704 aa7□□□□□ -1.29
TOPBP1-201ENST00000260810 COL2A1P02458 1487 aaPredicted RBP7□□□□□ -1.29
TOPBP1-201ENST00000260810 OBSL1O75147 1896 aa7□□□□□ -1.29
TOPBP1-201ENST00000260810 FRAT2O75474 233 aaPredicted RBP7□□□□□ -1.29
TOPBP1-201ENST00000260810 CACNB3P54284 484 aa7□□□□□ -1.29
TOPBP1-201ENST00000260810 USP49Q70CQ1 688 aa7□□□□□ -1.29
TOPBP1-201ENST00000260810 SH3RF3Q8TEJ3 882 aaPredicted RBP7□□□□□ -1.29
TOPBP1-201ENST00000260810 MAP3K14Q99558 947 aa7□□□□□ -1.29
TOPBP1-201ENST00000260810 CD209Q9NNX6 404 aa7□□□□□ -1.29
TOPBP1-201ENST00000260810 FAM177BA6PVY3 158 aa7□□□□□ -1.29
TOPBP1-201ENST00000260810 ANAPC4Q9UJX5 808 aa7□□□□□ -1.29
TOPBP1-201ENST00000260810 DCP1AQ9NPI6 582 aaPredicted RBP7□□□□□ -1.29
TOPBP1-201ENST00000260810 PLXNA4Q9HCM2 1894 aa7□□□□□ -1.29
TOPBP1-201ENST00000260810 ZNF532Q9HCE3 1301 aa7□□□□□ -1.29
TOPBP1-201ENST00000260810 FAM196BA6NMK8 535 aa7□□□□□ -1.29
TOPBP1-201ENST00000260810 ECHDC1Q9NTX5 307 aa7□□□□□ -1.29
TOPBP1-201ENST00000260810 ADCY6O43306 1168 aa6.99□□□□□ -1.29
TOPBP1-201ENST00000260810 IFIT2P09913 472 aaKnown RBP6.99□□□□□ -1.29
TOPBP1-201ENST00000260810 DPYDQ12882 1025 aa6.99□□□□□ -1.29
TOPBP1-201ENST00000260810 GRAPQ13588 217 aa6.99□□□□□ -1.29
TOPBP1-201ENST00000260810 R3HDM1Q15032 1099 aaKnown RBP6.99□□□□□ -1.29
TOPBP1-201ENST00000260810 GRAPLQ8TC17 118 aaPredicted RBP6.99□□□□□ -1.29
TOPBP1-201ENST00000260810 RTF1Q92541 710 aaKnown RBP6.99□□□□□ -1.29
TOPBP1-201ENST00000260810 LENG9Q96B70 501 aa6.99□□□□□ -1.29
TOPBP1-201ENST00000260810 GZF1Q9H116 711 aaPredicted RBP6.99□□□□□ -1.29
TOPBP1-201ENST00000260810 NCOA5Q9HCD5 579 aaKnown RBP6.99□□□□□ -1.29
TOPBP1-201ENST00000260810 ZMYM6O95789 1325 aa6.99□□□□□ -1.29
TOPBP1-201ENST00000260810 FSD2A1L4K1 749 aa6.99□□□□□ -1.29
TOPBP1-201ENST00000260810 CMTR1Q8N1G2 835 aaKnown RBP6.99□□□□□ -1.29
TOPBP1-201ENST00000260810 LTBP2Q14767 1821 aa6.99□□□□□ -1.29
TOPBP1-201ENST00000260810 HSP90AB1P08238 724 aaKnown RBP6.99□□□□□ -1.29
TOPBP1-201ENST00000260810 CREB3L3Q68CJ9 461 aa6.99□□□□□ -1.29
TOPBP1-201ENST00000260810 DYNLL2Q96FJ2 89 aa6.99□□□□□ -1.29
TOPBP1-201ENST00000260810 CEP290O15078 2479 aa6.99□□□□□ -1.29
TOPBP1-201ENST00000260810 CCDC84Q86UT8 332 aaPredicted RBP6.99□□□□□ -1.29
TOPBP1-201ENST00000260810 REPS2Q8NFH8 660 aa6.99□□□□□ -1.29
TOPBP1-201ENST00000260810 CNKSR2Q8WXI2 1034 aa6.99□□□□□ -1.29
TOPBP1-201ENST00000260810 BRIP1Q9BX63 1249 aa6.99□□□□□ -1.29
TOPBP1-201ENST00000260810 PTPAQ15257 358 aa6.98□□□□□ -1.29
TOPBP1-201ENST00000260810 NBPF9Q3BBW0 867 aa6.98□□□□□ -1.29
TOPBP1-201ENST00000260810 KIF1BPQ96EK5 621 aa6.98□□□□□ -1.29
TOPBP1-201ENST00000260810 USP17L8P0C7I0 530 aa6.98□□□□□ -1.29
TOPBP1-201ENST00000260810 CWC27Q6UX04 472 aaKnown RBP6.98□□□□□ -1.29
TOPBP1-201ENST00000260810 STAG2Q8N3U4 1231 aa6.98□□□□□ -1.29
TOPBP1-201ENST00000260810 GPR75-ASB3A0A0A6YYF3 556 aa6.98□□□□□ -1.29
TOPBP1-201ENST00000260810 ADRA2BP18089 450 aa6.98□□□□□ -1.29
TOPBP1-201ENST00000260810 LMBRD1Q9NUN5 540 aa6.98□□□□□ -1.29
TOPBP1-201ENST00000260810 TTC3P53804 2025 aa6.98□□□□□ -1.29
TOPBP1-201ENST00000260810 E7EWF7 191 aa6.98□□□□□ -1.29
TOPBP1-201ENST00000260810 TATDN1Q6P1N9 297 aa6.98□□□□□ -1.29
TOPBP1-201ENST00000260810 BRAPQ7Z569 592 aa6.98□□□□□ -1.29
TOPBP1-201ENST00000260810 RIC3Q7Z5B4 369 aa6.98□□□□□ -1.29
TOPBP1-201ENST00000260810 AACSQ86V21 672 aa6.98□□□□□ -1.29
TOPBP1-201ENST00000260810 DAXXQ9UER7 740 aaPredicted RBP6.98□□□□□ -1.29
TOPBP1-201ENST00000260810 DAGLAQ9Y4D2 1042 aa6.98□□□□□ -1.29
TOPBP1-201ENST00000260810 BRD1O95696 1058 aa6.97□□□□□ -1.29
TOPBP1-201ENST00000260810 ZNF526Q8TF50 670 aaPredicted RBP6.97□□□□□ -1.29
TOPBP1-201ENST00000260810 ARTNQ5T4W7 220 aa6.97□□□□□ -1.29
TOPBP1-201ENST00000260810 MAMDC4Q6UXC1 1216 aa6.97□□□□□ -1.29
TOPBP1-201ENST00000260810 GOLIM4O00461 696 aa6.97□□□□□ -1.29
TOPBP1-201ENST00000260810 RGS20O76081 388 aa6.97□□□□□ -1.29
TOPBP1-201ENST00000260810 B3GNT9Q6UX72 402 aa6.97□□□□□ -1.29
TOPBP1-201ENST00000260810 NSUN7Q8NE18 718 aaKnown RBP6.97□□□□□ -1.29
TOPBP1-201ENST00000260810 ENGASEQ8NFI3 743 aa6.97□□□□□ -1.29
TOPBP1-201ENST00000260810 AK7Q96M32 723 aa6.97□□□□□ -1.29
TOPBP1-201ENST00000260810 MTMR6Q9Y217 621 aa6.97□□□□□ -1.29
TOPBP1-201ENST00000260810 RBM8AQ9Y5S9 174 aaKnown RBP6.97□□□□□ -1.29
TOPBP1-201ENST00000260810 SCN10AQ9Y5Y9 1956 aa6.97□□□□□ -1.29
TOPBP1-201ENST00000260810 LRBAP50851 2863 aa6.97□□□□□ -1.29
TOPBP1-201ENST00000260810 RASA1P20936 1047 aa6.97□□□□□ -1.29
TOPBP1-201ENST00000260810 CLK2P49760 499 aaKnown RBP6.97□□□□□ -1.29
TOPBP1-201ENST00000260810 RPS8P62241 208 aaKnown RBP6.97□□□□□ -1.29
TOPBP1-201ENST00000260810 RAB3GAP1Q15042 981 aa6.97□□□□□ -1.29
TOPBP1-201ENST00000260810 AXDND1Q5T1B0 1012 aaPredicted RBP6.97□□□□□ -1.29
TOPBP1-201ENST00000260810 BICDL1Q6ZP65 573 aa6.97□□□□□ -1.29
TOPBP1-201ENST00000260810 TMX3Q96JJ7 454 aa6.97□□□□□ -1.29
TOPBP1-201ENST00000260810 CRAMP1Q96RY5 1269 aa6.97□□□□□ -1.29
TOPBP1-201ENST00000260810 GOLPH3LQ9H4A5 285 aa6.97□□□□□ -1.29
TOPBP1-201ENST00000260810 TRMT112Q9UI30 125 aaKnown RBP6.97□□□□□ -1.29
TOPBP1-201ENST00000260810 ENAHQ8N8S7 591 aaPredicted RBP6.96□□□□□ -1.29
TOPBP1-201ENST00000260810 NECAB1Q8N987 351 aa6.96□□□□□ -1.29
TOPBP1-201ENST00000260810 PAG1Q9NWQ8 432 aa6.96□□□□□ -1.29
TOPBP1-201ENST00000260810 CST9Q5W186 159 aa6.96□□□□□ -1.29
TOPBP1-201ENST00000260810 SPATA5Q8NB90 893 aa6.96□□□□□ -1.29
TOPBP1-201ENST00000260810 OXER1Q8TDS5 423 aa6.96□□□□□ -1.29
TOPBP1-201ENST00000260810 CTAGE1Q96RT6 745 aa6.96□□□□□ -1.29
TOPBP1-201ENST00000260810 OSBPL7Q9BZF2 842 aa6.96□□□□□ -1.29
TOPBP1-201ENST00000260810 UTP20O75691 2785 aaKnown RBP6.96□□□□□ -1.3
TOPBP1-201ENST00000260810 VIL1P09327 827 aaKnown RBP6.96□□□□□ -1.3
TOPBP1-201ENST00000260810 MDM2Q00987 491 aaPredicted RBP6.96□□□□□ -1.3
TOPBP1-201ENST00000260810 PPP4CP60510 307 aa6.96□□□□□ -1.3
TOPBP1-201ENST00000260810 SPIRE1Q08AE8 756 aa6.96□□□□□ -1.3
TOPBP1-201ENST00000260810 NBR1Q14596 966 aa6.96□□□□□ -1.3
TOPBP1-201ENST00000260810 CEP89Q96ST8 783 aa6.96□□□□□ -1.3
TOPBP1-201ENST00000260810 WRAP73Q9P2S5 460 aaPredicted RBP6.96□□□□□ -1.3
TOPBP1-201ENST00000260810 FLT1P17948 1338 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms