RNA–Protein interactions for RNA: ENST00000254667.7

PTPRE-201, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRE, Length 5,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-201ENST00000254667 NONOQ15233 471 aaKnown RBP eCLIP21.32■■□□□ 1
PTPRE-201ENST00000254667 TTC38Q5R3I4 469 aa21.32■■□□□ 1
PTPRE-201ENST00000254667 GOLGA1Q92805 767 aa21.32■■□□□ 1
PTPRE-201ENST00000254667 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.32■■□□□ 1
PTPRE-201ENST00000254667 ARHGAP30Q7Z6I6 1101 aaPredicted RBP21.32■■□□□ 1
PTPRE-201ENST00000254667 LARGE2Q8N3Y3 721 aa21.32■■□□□ 1
PTPRE-201ENST00000254667 RPS8P62241 208 aaKnown RBP21.32■■□□□ 1
PTPRE-201ENST00000254667 RNF187Q5TA31 235 aaPredicted RBP21.32■■□□□ 1
PTPRE-201ENST00000254667 PLIN2Q99541 437 aa21.32■■□□□ 1
PTPRE-201ENST00000254667 ARPP21Q9UBL0 812 aaPredicted RBP21.32■■□□□ 1
PTPRE-201ENST00000254667 GJA3Q9Y6H8 435 aa21.32■■□□□ 1
PTPRE-201ENST00000254667 TRAF5O00463 557 aa21.31■■□□□ 1
PTPRE-201ENST00000254667 ADCY7P51828 1080 aa21.31■■□□□ 1
PTPRE-201ENST00000254667 SSH2Q76I76 1423 aa21.31■■□□□ 1
PTPRE-201ENST00000254667 PDE4DQ08499 809 aa21.31■■□□□ 1
PTPRE-201ENST00000254667 FLAD1Q8NFF5 587 aa21.31■■□□□ 1
PTPRE-201ENST00000254667 IL17REQ8NFR9 667 aa21.31■■□□□ 1
PTPRE-201ENST00000254667 EFCAB6Q5THR3 1501 aa21.31■■□□□ 1
PTPRE-201ENST00000254667 OPA1O60313 960 aa21.31■■□□□ 1
PTPRE-201ENST00000254667 RGS22Q8NE09 1264 aa21.31■■□□□ 1
PTPRE-201ENST00000254667 PRDM1O75626 825 aa21.3■■□□□ 1
PTPRE-201ENST00000254667 EEF2P13639 858 aaKnown RBP21.3■■□□□ 1
PTPRE-201ENST00000254667 SLC1A4P43007 532 aa21.3■■□□□ 1
PTPRE-201ENST00000254667 AKR1B15C9JRZ8 316 aaPredicted RBP21.3■■□□□ 1
PTPRE-201ENST00000254667 CCNT1O60563 726 aaKnown RBP21.3■■□□□ 1
PTPRE-201ENST00000254667 CLSTN2Q9H4D0 955 aa21.3■■□□□ 1
PTPRE-201ENST00000254667 FAM212AQ96EL1 285 aa21.29■■□□□ 1
PTPRE-201ENST00000254667 EXOC7Q9UPT5 735 aa21.29■■□□□ 1
PTPRE-201ENST00000254667 FCHSD1Q86WN1 690 aa21.29■■□□□ 1
PTPRE-201ENST00000254667 MLKLQ8NB16 471 aa21.29■■□□□ 1
PTPRE-201ENST00000254667 PPP1R14CQ8TAE6 165 aa21.29■■□□□ 1
PTPRE-201ENST00000254667 NCOA5Q9HCD5 579 aaKnown RBP21.29■■□□□ 1
PTPRE-201ENST00000254667 A0A1W2PRG0 241 aa21.29■■□□□ 1
PTPRE-201ENST00000254667 NOC4LQ9BVI4 516 aaKnown RBP21.29■■□□□ 1
PTPRE-201ENST00000254667 IQCGQ9H095 443 aaKnown RBP21.29■■□□□ 1
PTPRE-201ENST00000254667 GUCA1BQ9UMX6 200 aa21.29■■□□□ 1
PTPRE-201ENST00000254667 AKNAD1Q5T1N1 836 aa21.28■■□□□ 1
PTPRE-201ENST00000254667 USP44Q9H0E7 712 aa21.28■■□□□ 1
PTPRE-201ENST00000254667 CALUO43852 315 aaPredicted RBP21.28■■□□□ 1
PTPRE-201ENST00000254667 PCCAP05165 728 aaPredicted RBP21.28■■□□□ 1
PTPRE-201ENST00000254667 ZBTB38Q8NAP3 1195 aaPredicted RBP21.28■■□□□ 1
PTPRE-201ENST00000254667 MBD5Q9P267 1494 aa21.28■■□□□ 1
PTPRE-201ENST00000254667 CTDSPL2Q05D32 466 aa21.28■■□□□ 1
PTPRE-201ENST00000254667 DCAF17Q5H9S7 520 aaPredicted RBP21.28■■□□□ 1
PTPRE-201ENST00000254667 SSX2IPQ9Y2D8 614 aa21.28■■□□□ 1
PTPRE-201ENST00000254667 MYOM2P54296 1465 aa21.28■■□□□ 1
PTPRE-201ENST00000254667 FERP16591 822 aa21.28■■□□□ 1
PTPRE-201ENST00000254667 WDR44Q5JSH3 913 aa21.28■■□□□ 1
PTPRE-201ENST00000254667 KRT222Q8N1A0 295 aa21.28■■□□□ 1
PTPRE-201ENST00000254667 DDX17Q92841 729 aaKnown RBP21.28■■□□□ 1
PTPRE-201ENST00000254667 FNBP1Q96RU3 617 aa21.28■■□□□ 1
PTPRE-201ENST00000254667 CTNND2Q9UQB3 1225 aa21.27■■□□□ 1
PTPRE-201ENST00000254667 ATP7BP35670 1465 aa21.27■■□□□ 1
PTPRE-201ENST00000254667 BRDTQ58F21 947 aaPredicted RBP21.27■■□□□ 1
PTPRE-201ENST00000254667 KIFAP3Q92845 792 aa21.27■■□□□ 1
PTPRE-201ENST00000254667 BAG1Q99933 345 aaPredicted RBP21.27■■□□□ 1
PTPRE-201ENST00000254667 RNF216Q9NWF9 866 aaPredicted RBP21.27■■□□□ 1
PTPRE-201ENST00000254667 YEATS2Q9ULM3 1422 aa21.27■■□□□ 1
PTPRE-201ENST00000254667 KRT40Q6A162 431 aa21.27■■□□□ 1
PTPRE-201ENST00000254667 GSTA5Q7RTV2 222 aa21.27■■□□□ 1
PTPRE-201ENST00000254667 IFT74Q96LB3 600 aa21.27■■□□□ 1
PTPRE-201ENST00000254667 NSRP1Q9H0G5 558 aaKnown RBP21.27■■□□□ 1
PTPRE-201ENST00000254667 MLH3Q9UHC1 1453 aa21.27■■□□□ 1
PTPRE-201ENST00000254667 E7EWF7 191 aa21.27■■□□□ 1
PTPRE-201ENST00000254667 ZBED4O75132 1171 aa21.27■■□□□ 1
PTPRE-201ENST00000254667 TBC1D8BQ0IIM8 1120 aa21.27■■□□□ 1
PTPRE-201ENST00000254667 MAGI2Q86UL8 1455 aa21.27■□□□□ 0.99
PTPRE-201ENST00000254667 WWC3Q9ULE0 1092 aa21.26■□□□□ 0.99
PTPRE-201ENST00000254667 ATP6V0A2Q9Y487 856 aa21.26■□□□□ 0.99
PTPRE-201ENST00000254667 SP4Q02446 784 aa21.26■□□□□ 0.99
PTPRE-201ENST00000254667 LRWD1Q9UFC0 647 aa21.26■□□□□ 0.99
PTPRE-201ENST00000254667 RNF123Q5XPI4 1314 aa21.26■□□□□ 0.99
PTPRE-201ENST00000254667 TNNC1P63316 161 aa21.26■□□□□ 0.99
PTPRE-201ENST00000254667 KDM5DQ9BY66 1539 aa21.26■□□□□ 0.99
PTPRE-201ENST00000254667 CETN3O15182 167 aa21.26■□□□□ 0.99
PTPRE-201ENST00000254667 TXKP42681 527 aa21.26■□□□□ 0.99
PTPRE-201ENST00000254667 MAP3K9P80192 1104 aa21.26■□□□□ 0.99
PTPRE-201ENST00000254667 MTUS1Q9ULD2 1270 aa21.26■□□□□ 0.99
PTPRE-201ENST00000254667 RAPGEF1Q13905 1077 aa21.25■□□□□ 0.99
PTPRE-201ENST00000254667 ZNF569Q5MCW4 686 aa21.25■□□□□ 0.99
PTPRE-201ENST00000254667 NIM1KQ8IY84 436 aa21.25■□□□□ 0.99
PTPRE-201ENST00000254667 MAGI3Q5TCQ9 1506 aa21.25■□□□□ 0.99
PTPRE-201ENST00000254667 ARHGEF35A5YM69 484 aa21.25■□□□□ 0.99
PTPRE-201ENST00000254667 CCDC50Q8IVM0 306 aa21.25■□□□□ 0.99
PTPRE-201ENST00000254667 LEO1Q8WVC0 666 aaPredicted RBP21.25■□□□□ 0.99
PTPRE-201ENST00000254667 PPARAQ07869 468 aa21.25■□□□□ 0.99
PTPRE-201ENST00000254667 BEND3Q5T5X7 828 aa21.25■□□□□ 0.99
PTPRE-201ENST00000254667 MAPKAPK5Q8IW41 473 aa21.25■□□□□ 0.99
PTPRE-201ENST00000254667 LZTFL1Q9NQ48 299 aa21.25■□□□□ 0.99
PTPRE-201ENST00000254667 TFAP4Q01664 338 aa21.25■□□□□ 0.99
PTPRE-201ENST00000254667 PLCB3Q01970 1234 aa21.25■□□□□ 0.99
PTPRE-201ENST00000254667 NUP58Q9BVL2 599 aa21.25■□□□□ 0.99
PTPRE-201ENST00000254667 ABCA8O94911 1581 aa21.24■□□□□ 0.99
PTPRE-201ENST00000254667 TMEM110-MUSTN1A8MSY1 372 aa21.24■□□□□ 0.99
PTPRE-201ENST00000254667 ATP2B4P23634 1241 aa21.24■□□□□ 0.99
PTPRE-201ENST00000254667 C6orf163Q5TEZ5 329 aa21.24■□□□□ 0.99
PTPRE-201ENST00000254667 MCTP2Q6DN12 878 aa21.24■□□□□ 0.99
PTPRE-201ENST00000254667 POLR2DO15514 142 aaKnown RBP21.24■□□□□ 0.99
PTPRE-201ENST00000254667 GRM1Q13255 1194 aa21.24■□□□□ 0.99
PTPRE-201ENST00000254667 GRIPAP1Q4V328 841 aa21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms