RNA–Protein interactions for RNA: ENST00000247003.8

DDX49-201, Transcript of DEAD-box helicase 49, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX49, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-201ENST00000247003 MRPS27Q92552 414 aaKnown RBP17.58■□□□□ 0.41
DDX49-201ENST00000247003 ESR2Q92731 530 aa17.58■□□□□ 0.41
DDX49-201ENST00000247003 CCDC196A0A1B0GTZ2 297 aa17.58■□□□□ 0.4
DDX49-201ENST00000247003 MINDY4BA8MYZ0 360 aa17.58■□□□□ 0.4
DDX49-201ENST00000247003 CDC27P30260 824 aa17.58■□□□□ 0.4
DDX49-201ENST00000247003 ANO6Q4KMQ2 910 aa17.58■□□□□ 0.4
DDX49-201ENST00000247003 FBXO33Q7Z6M2 555 aa17.58■□□□□ 0.4
DDX49-201ENST00000247003 TRIM22Q8IYM9 498 aa17.58■□□□□ 0.4
DDX49-201ENST00000247003 FSIP1Q8NA03 581 aa17.58■□□□□ 0.4
DDX49-201ENST00000247003 ANAPC4Q9UJX5 808 aa17.58■□□□□ 0.4
DDX49-201ENST00000247003 TRPC5Q9UL62 973 aaPredicted RBP17.58■□□□□ 0.4
DDX49-201ENST00000247003 RCAN1P53805 252 aa17.57■□□□□ 0.4
DDX49-201ENST00000247003 ADALQ6DHV7 355 aa17.57■□□□□ 0.4
DDX49-201ENST00000247003 TMED8Q6PL24 325 aaPredicted RBP17.57■□□□□ 0.4
DDX49-201ENST00000247003 ADGRA1Q86SQ6 560 aa17.57■□□□□ 0.4
DDX49-201ENST00000247003 PHKBQ93100 1093 aa17.57■□□□□ 0.4
DDX49-201ENST00000247003 BRIP1Q9BX63 1249 aa17.57■□□□□ 0.4
DDX49-201ENST00000247003 INCENPQ9NQS7 918 aa17.57■□□□□ 0.4
DDX49-201ENST00000247003 TNRC6CQ9HCJ0 1690 aaKnown RBP17.57■□□□□ 0.4
DDX49-201ENST00000247003 A0A1W2PQ27 194 aa17.56■□□□□ 0.4
DDX49-201ENST00000247003 A0A1W2PQ64 194 aa17.56■□□□□ 0.4
DDX49-201ENST00000247003 A0A1W2PQD8 194 aa17.56■□□□□ 0.4
DDX49-201ENST00000247003 PCP11498 1178 aaKnown RBP17.56■□□□□ 0.4
DDX49-201ENST00000247003 RTN1Q16799 776 aa17.56■□□□□ 0.4
DDX49-201ENST00000247003 LINC00301Q8NCQ3 95 aa17.56■□□□□ 0.4
DDX49-201ENST00000247003 NKX2-3Q8TAU0 364 aa17.56■□□□□ 0.4
DDX49-201ENST00000247003 RIOK1Q9BRS2 568 aaKnown RBP17.56■□□□□ 0.4
DDX49-201ENST00000247003 MYL10Q9BUA6 226 aa17.56■□□□□ 0.4
DDX49-201ENST00000247003 SENP2Q9HC62 589 aa17.56■□□□□ 0.4
DDX49-201ENST00000247003 SPTLC2O15270 562 aa17.56■□□□□ 0.4
DDX49-201ENST00000247003 ADRA2BP18089 450 aa17.56■□□□□ 0.4
DDX49-201ENST00000247003 KRT40Q6A162 431 aa17.56■□□□□ 0.4
DDX49-201ENST00000247003 STK11IPQ8N1F8 1099 aa17.56■□□□□ 0.4
DDX49-201ENST00000247003 CNBD1Q8NA66 436 aa17.56■□□□□ 0.4
DDX49-201ENST00000247003 SLC26A6Q9BXS9 759 aa17.56■□□□□ 0.4
DDX49-201ENST00000247003 PCDHA7Q9UN72 937 aa17.56■□□□□ 0.4
DDX49-201ENST00000247003 DUOX1Q9NRD9 1551 aa17.55■□□□□ 0.4
DDX49-201ENST00000247003 CCDC88AQ3V6T2 1871 aa17.55■□□□□ 0.4
DDX49-201ENST00000247003 GOLGA6L6A8MZA4 724 aa17.55■□□□□ 0.4
DDX49-201ENST00000247003 FMNL1O95466 1100 aaPredicted RBP17.55■□□□□ 0.4
DDX49-201ENST00000247003 IFNAR1P17181 557 aa17.55■□□□□ 0.4
DDX49-201ENST00000247003 ANO1Q5XXA6 986 aa17.55■□□□□ 0.4
DDX49-201ENST00000247003 ZKSCAN3Q9BRR0 538 aa17.55■□□□□ 0.4
DDX49-201ENST00000247003 GOLPH3LQ9H4A5 285 aa17.55■□□□□ 0.4
DDX49-201ENST00000247003 CLIC4Q9Y696 253 aa17.55■□□□□ 0.4
DDX49-201ENST00000247003 ZNF500O60304 480 aaPredicted RBP17.54■□□□□ 0.4
DDX49-201ENST00000247003 ONECUT3O60422 494 aaPredicted RBP17.54■□□□□ 0.4
DDX49-201ENST00000247003 CHAF1AQ13111 956 aaPredicted RBP17.54■□□□□ 0.4
DDX49-201ENST00000247003 SAFBQ15424 915 aaKnown RBP eCLIP17.54■□□□□ 0.4
DDX49-201ENST00000247003 NTRK3Q16288 839 aa17.54■□□□□ 0.4
DDX49-201ENST00000247003 STX1AQ16623 288 aa17.54■□□□□ 0.4
DDX49-201ENST00000247003 SPTY2D1Q68D10 685 aaPredicted RBP17.54■□□□□ 0.4
DDX49-201ENST00000247003 FAM196AQ6ZSG2 479 aa17.54■□□□□ 0.4
DDX49-201ENST00000247003 CCDC24Q8N4L8 307 aa17.54■□□□□ 0.4
DDX49-201ENST00000247003 JMYQ8N9B5 988 aa17.54■□□□□ 0.4
DDX49-201ENST00000247003 CRNKL1Q9BZJ0 848 aaKnown RBP17.54■□□□□ 0.4
DDX49-201ENST00000247003 TFCP2L1Q9NZI6 479 aa17.54■□□□□ 0.4
DDX49-201ENST00000247003 TAOK2Q9UL54 1235 aa17.54■□□□□ 0.4
DDX49-201ENST00000247003 LAMB1P07942 1786 aa17.54■□□□□ 0.4
DDX49-201ENST00000247003 WTIPA6NIX2 430 aaPredicted RBP17.54■□□□□ 0.4
DDX49-201ENST00000247003 KIF28PB7ZC32 967 aa17.54■□□□□ 0.4
DDX49-201ENST00000247003 DYNLL1P63167 89 aaKnown RBP17.54■□□□□ 0.4
DDX49-201ENST00000247003 PPP2R5BQ15173 497 aa17.54■□□□□ 0.4
DDX49-201ENST00000247003 NSUN4Q96CB9 384 aaKnown RBP17.54■□□□□ 0.4
DDX49-201ENST00000247003 CBX8Q9HC52 389 aa17.54■□□□□ 0.4
DDX49-201ENST00000247003 GJB4Q9NTQ9 266 aa17.54■□□□□ 0.4
DDX49-201ENST00000247003 RANBP6O60518 1105 aaKnown RBP17.53■□□□□ 0.4
DDX49-201ENST00000247003 TPM3P06753 285 aa17.53■□□□□ 0.4
DDX49-201ENST00000247003 SLC3A2P08195 630 aaKnown RBP17.53■□□□□ 0.4
DDX49-201ENST00000247003 KLRK1P26718 216 aa17.53■□□□□ 0.4
DDX49-201ENST00000247003 ZNF165P49910 485 aa17.53■□□□□ 0.4
DDX49-201ENST00000247003 MECOMQ03112 1051 aa17.53■□□□□ 0.4
DDX49-201ENST00000247003 KIAA2012Q0VF49 1180 aa17.53■□□□□ 0.4
DDX49-201ENST00000247003 GRAPQ13588 217 aa17.53■□□□□ 0.4
DDX49-201ENST00000247003 ZRSR1Q15695 479 aaKnown RBP17.53■□□□□ 0.4
DDX49-201ENST00000247003 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.53■□□□□ 0.4
DDX49-201ENST00000247003 IQCA1Q86XH1 822 aa17.53■□□□□ 0.4
DDX49-201ENST00000247003 ZNF654Q8IZM8 581 aa17.53■□□□□ 0.4
DDX49-201ENST00000247003 GRAPLQ8TC17 118 aaPredicted RBP17.53■□□□□ 0.4
DDX49-201ENST00000247003 AIFM3Q96NN9 605 aa17.53■□□□□ 0.4
DDX49-201ENST00000247003 NAP1L5Q96NT1 182 aaPredicted RBP17.53■□□□□ 0.4
DDX49-201ENST00000247003 BCL11BQ9C0K0 894 aaPredicted RBP17.53■□□□□ 0.4
DDX49-201ENST00000247003 QTRT2Q9H974 415 aaKnown RBP17.53■□□□□ 0.4
DDX49-201ENST00000247003 ANKIB1Q9P2G1 1089 aa17.53■□□□□ 0.4
DDX49-201ENST00000247003 TACC3Q9Y6A5 838 aa17.53■□□□□ 0.4
DDX49-201ENST00000247003 TNKSO95271 1327 aa17.53■□□□□ 0.4
DDX49-201ENST00000247003 IGSF3O75054 1194 aa17.52■□□□□ 0.4
DDX49-201ENST00000247003 SNW1Q13573 536 aaKnown RBP17.52■□□□□ 0.4
DDX49-201ENST00000247003 LUZP1Q86V48 1076 aa17.52■□□□□ 0.4
DDX49-201ENST00000247003 DZIP1Q86YF9 867 aaKnown RBP17.52■□□□□ 0.4
DDX49-201ENST00000247003 SEPT12Q8IYM1 358 aa17.52■□□□□ 0.4
DDX49-201ENST00000247003 ENGASEQ8NFI3 743 aa17.52■□□□□ 0.4
DDX49-201ENST00000247003 NUP133Q8WUM0 1156 aa17.52■□□□□ 0.4
DDX49-201ENST00000247003 DNAJC25Q9H1X3 360 aa17.52■□□□□ 0.4
DDX49-201ENST00000247003 FAM217BQ9NTX9 383 aaPredicted RBP17.52■□□□□ 0.4
DDX49-201ENST00000247003 KIAA1551Q9HCM1 1747 aa17.52■□□□□ 0.39
DDX49-201ENST00000247003 GOLGA6L19H0YKK7 550 aa17.51■□□□□ 0.39
DDX49-201ENST00000247003 DEXIO95424 95 aa17.51■□□□□ 0.39
DDX49-201ENST00000247003 RPGRQ92834 1020 aaKnown RBP17.51■□□□□ 0.39
DDX49-201ENST00000247003 SDF4Q9BRK5 362 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms